Array 1 49789-49996 **** Predicted by CRISPRDetect 2.4 *** >NZ_QUFY01000023.1 Butyricicoccus sp. AF22-28AC AF22-28AC.Scaf23, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================= ==================================== ================== 49789 25 96.0 36 ............C............ TTTGCGGTCATCAGAAGAGCGCGGGTTATGATAGGG 49850 25 96.0 36 ...T..................... GTTAATGAGGGAGTACGCCAAGCAATGCGCGAGGGT 49911 25 100.0 36 ......................... AAAAAGGCGAATAAGGGTTGCAAATCAAATCAAGGT 49972 25 100.0 0 ......................... | ========== ====== ====== ====== ========================= ==================================== ================== 4 25 98.0 36 TGACCCCCGCACTGGCGGGGAAAAC # Left flank : TAATCCATAACCTCGCTGATGAAATCAATGCGGCCCAACAGGTCTGTCAAGCTAGTCGACTGGAAGATAATTGACCAATAATTCGATGTGCCATACTCCTCGAAATTACGCACGCGATTGCAATATGCATCGTATTTATCATCCAGTTCCTGATTGGAGATTTCGATGTCATTTTCCAGAACTGCAATCTGCTGATCCAGCTTGGCAATTTCCTCTTTCAAATCCTTCACCTGAGCAGTAACATCGTCGTATTGCGTTTGTAGCTTGCTCTTTTCTTTTTGGATATTGTCTATCGTTGTCTTATTGGCATCGATCTTTTGCTGCAACTCCTGTCGCTGTTGGAAGTTGTTCTCGTAGTCACTTGCCGGCGTAGCTGATGCAGGAACTACGAATGTAGTTGCAACCATCAAAGACGCCACCGCACCTGCGGAGAATTTTTTTACCCATTTCTTTTCACTTGCGAATATCATTGGGGACAGTCCTTTCTTCATGTTATTTCA # Right flank : GTTTGACTGCAAACTTTTTCTCCTCTATACTACAGG # Questionable array : NO Score: 5.76 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TGACCCCCGCACTGGCGGGGAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,2] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-9.60,-8.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [63.3-36.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.01,0.41 Confidence: MEDIUM] # Array family : NA // Array 1 54589-56277 **** Predicted by CRISPRDetect 2.4 *** >NZ_QUFY01000019.1 Butyricicoccus sp. AF22-28AC AF22-28AC.Scaf19, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 54589 32 100.0 35 ................................ ATGTCTTCCATGTTGTATGGACTTGCAATCATGCA 54656 32 100.0 35 ................................ TGCGACGAACGCACCACTCAGTCGCTTCGTAGAAG 54723 32 100.0 35 ................................ TCAAGAACTCCATGGACTGGCACAGGACCAACGAT 54790 32 100.0 34 ................................ GCTGCACAATAGCGCTTGGCGTAATACTTGCGTA 54856 32 100.0 32 ................................ TTTGCAATCTCAAGGTACAGGTACTGGTACCG 54920 32 100.0 37 ................................ CGCATTACGCGCGTGGAGCATCACTACGGCGGTGCAG 54989 32 100.0 35 ................................ TACCATAATTTTTTGGGGGGGTAAAAGGGCATTTT 55056 32 100.0 35 ................................ GCCAGCGAGTGCGCCGCGTGAGTGGCGCGCCGCGG 55123 32 100.0 35 ................................ TGCCAGCATTGTAACCGCCGTTGCAGATGTTCTTG 55190 32 96.9 35 .............T.................. TGCGCTGTACTTGGCTACCTCCAAGATTGCCGAGC 55257 32 100.0 35 ................................ TACCGCTATGGCGGCTATTGTCGCTGCACCGGTAG 55324 32 100.0 34 ................................ TACCGCGCTTACTGCACTGTGTAATAGCCCGTTG 55390 32 100.0 33 ................................ CGCGAAGCGTTTGAAGGTGTGCCGCAGGTGACC 55455 32 100.0 33 ................................ GAGCAGAATACAAATTCCTTGTAATAAGTGCCG 55520 32 100.0 35 ................................ ATTTTGTTTGCTGGTGTGCGTACAAGTCCGGTGCG 55587 32 100.0 33 ................................ CATGTCGCGCTGCAGGAGGCGGACACGGACGGC 55652 32 100.0 34 ................................ CCTTGCGGGCAATGCGCCGGTGATGGCGGCAAGT 55718 32 100.0 32 ................................ TGAAATTAAAATTTATGGGTGCGGGCTTTAAG 55782 32 100.0 34 ................................ TCAGCAGTGCACCAAGGGCGACGATGTGTTTGAG 55848 32 100.0 36 ................................ GTAATTCTACGGGTGGATTGAGTGGTATAGCTGATT 55916 32 100.0 35 ................................ ACCGCCCACAGCAAAGGAATGTGATGAAGCTGCTC 55983 32 100.0 34 ................................ ATCAAACAGATCCTTGGCAAGTCTAAGGGCAACT 56049 32 100.0 33 ................................ TCTACCGCAGGCCCGGTCAAGGCCGGTGATGTC 56114 32 96.9 34 ............G................... ATGACCGTACTGCGTGAGCGGCTGAAAAACGGCG 56180 32 96.9 34 ............G................... TTTGTCGCGGAGGCGCGGAAGGTCTGGAGGATGA 56246 32 96.9 0 ............G................... | ========== ====== ====== ====== ================================ ===================================== ================== 26 32 99.5 34 GTCGCTCCCTTCACGGGAGCGTGGATTGAAAT # Left flank : TTTGTGGAAATGAGGTGTCGAATATGCTGGTTGTGATTACTTACGATGTCAACACCGAAACAGCCGCCGGGCGCAAACGCCTGCGGCAGATTGCCAGGCAGTGCGTCAATTATGGACAGCGTGTGCAGAATTCCGTGTTTGAATGCCTGATTGACGCGGCTCAGTGCCGTATGCTGCAACAGAAGCTGTGCACCATTATGGATGATGAACTGGACAGTCTGCGATTTTACTATCTCGGCAACAAATATGAAAATAAGATTGAGCATTTTGGTGCGAAACGCGGCTATGAGCCGGAAGGCGTGCTTATGGTGTAAGGCGGTGCGAAGTGCAAGCAAACCGAAAAGTGTCGGCGCTTCGCACCGTAATTTCCGATAGATTATATACAATAGTTTTATCGAATGTCAAATTTGCAATTGTGTTTTGCACGAATCTATGCAAAACTGTTATTGTAATTGTTTATTTTGTAAAAATCATTGGGGATAGTCTTGGTGATTTTTGCT # Right flank : CGTACAAGGCATTTGAATGTCGCGCTACGATGTCCGGGTCGCTCCCTTCGCGGGGAC # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCCTTCACGGGAGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCTCCCTTCACGGGAGCGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-6.40,-5.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [71.7-36.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [10.05,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 5-234 **** Predicted by CRISPRDetect 2.4 *** >NZ_QUFY01000033.1 Butyricicoccus sp. AF22-28AC AF22-28AC.Scaf33, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 5 32 93.8 33 ..............................TA TGAATTCTTGAAAATCGACTTTTGCGCGACCGT 70 32 100.0 34 ................................ ACCGTGGAAACCGTGACCGCCGAGGAGGAAACCG 136 32 100.0 35 ................................ TTGATGAGCAGACCGGGTTTCTTGGTGTTCTCGAT 203 32 96.9 0 .................G.............. | ========== ====== ====== ====== ================================ =================================== ================== 4 32 97.7 34 GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAT # Left flank : CCGGG # Right flank : TGGCGGTGGTGTTCGGGGCTTCCTGCTCTCTGATGTCGCTCCCTTCACGGGATCGACACAGATAGCCGCACCACCATCCTCCCGTCCAACATCGCCCGATCTCTATCCCTCACAATCTTTCACCCGCCCGACCAAAACATTTGCACATGTCATGACACATGTGCTATAATAACTCCAATACCGCTATTGACAGCGCCGCACAGATTGTTGCGGCGTTTTGCCGGGAAGGAGAAAAATCAAATGAAAGCATACTTTGACAGCATCGAAAAGGAGGTTCCGAAGCAATTACAGCAGGTTTTCCTTAATCGCCGCGATACGGCTGTCATTACGATTGACATGCACGATGGACACCTGTCAACCGACCCGGACTGTCCATGTCCGTCTCCGCGAGGACGCGAGATCATCGAACCGCTCAATCATTTCATGAACGAAGCACGCGCGCTCGGTCTGCCGATCATCCATGTCCGCTCAACGCTGCGTAAGGGCGGCGCAGACGAAAA # Questionable array : NO Score: 8.75 # Score Detail : 1:0, 2:3, 3:3, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCTCCCTTCACGGGAGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-6.00,-5.80] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [0.0-38.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.64 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 63102-63312 **** Predicted by CRISPRDetect 2.4 *** >NZ_QUFY01000006.1 Butyricicoccus sp. AF22-28AC AF22-28AC.Scaf6, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 63102 28 100.0 33 ............................ CAAGTAACTAACGGCTACATTAAATGCTCTAGC 63163 28 100.0 33 ............................ TGTTAGTATAAAAAGGAGTGCTGCAAAAGTCAA 63224 28 100.0 33 ............................ TCTCGCCGCTGCGCTTCGCTCCGGTCTATGTGC 63285 28 92.9 0 ..............C..........C.. | ========== ====== ====== ====== ============================ ================================= ================== 4 28 98.2 33 GTTTACCCCGCATATGCGGGGATGGACC # Left flank : CGGCAAATGGGTTTCTGCCCATTTTGACGGAAGGATTCTCCTCCACGACAGAGCACTGTCTATGCTTTCTCAAAGAGAGTCCCGTGATGTTGACATTACACTGCTGTGTGATGCACTGGACTTTCTTGGCACAGATTATTGGGAAACTGTATTTGGTTCGCTGTCACAGGAGAATATGCTCAATAACTGTTCTTTGAAGTATCAACGTCCGTTTTCTGTAGCGCCGATACAGGATCGTACAATCGCGCATACAACAACTCAGTATCACATCCCATATGCAGATAAGCCTAATGTGAAAGAGAAGATGCATCCGTTAAAGCTGCATTTGAAAGTAAGAAATGATTCTGCTTCGCTCTTGAGAATTTACTTCTTTCTGGATAAACGGCGACAGTTGATTGTAATCGGTTCGCTGCCGCATCATCTGAAAACGATTACATCTTTTTGAGCATAAATTACTGTCTCAATAGACGATACAATGCAAATCGACAACCTCATTAAGA # Right flank : CTTATGAATATGCTTCAGCATTGCACAGCTGATGATTTCCCATTCAAGCGCATGGAGCGAACCCGTTATCATTTATGGTGAAGAATTTAGCCCTGCTTGAGCAGGGAATCAGCTTTATACTAATTTTTAAAAATACCTTGCAATAGAAGGAAGGATTCTCAATATATGAGTATCAAATCACTTATAAAATCTGGCTGCATAGCCATGGCTGCAACCTGTTTGTTAATGGGAACGGCGATTGCAGCGAATGAAACTCCCCAAAAGGTAACATCTTCGACACCTGAAGGTGTTACATATGGAGTGGATCAGAAATATAAAGCCCCACCGGACACAAGTCGTTATGCTAATATCAAGACTGCGGCTAGATGTGTTGTACTCCTTGTTTTAATCGGTTCCGTTCCTTTCATTGTTACACGAGCAGGGAAGCGTAAAGAAAAGGACGGCAATTCTGAAAAGGAATATGTAGAGGCATCTCATAAGGAAGCAGTACATCGCATTGT # Questionable array : NO Score: 2.77 # Score Detail : 1:0, 2:0, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTACCCCGCATATGCGGGGATGGACC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [66.7-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0.37 Confidence: MEDIUM] # Array family : NA // Array 2 67750-68635 **** Predicted by CRISPRDetect 2.4 *** >NZ_QUFY01000006.1 Butyricicoccus sp. AF22-28AC AF22-28AC.Scaf6, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ==================================== ================== 67750 28 100.0 32 ............................ TTAGCGATGCAATGCGTCAGCTATTTACGAGA 67810 28 100.0 33 ............................ CTTATTACCGATTGTTGAATTTGCTCGTAGCCA 67871 28 100.0 33 ............................ CGACCTCGTAATTGATGCTTATGCGACTTTTGG 67932 28 100.0 36 ............................ CAACAAAGACAGTTTTCCTTATTCCCTTGCAACGGC C [67937] 67997 28 96.4 32 ....A....................... TGGTTTGGTAGACTTCGACGATCTGGATGTTT 68057 28 92.9 33 ...TA....................... CTGTGCAGCACCTTCATTGGCGTGCCATCTAAG 68118 28 92.9 33 ....AT...................... CGTCAGCTTCGAACCAAGGCCATTGCGGACGCA 68179 28 92.9 32 ...T..............A......... CGCCGAACAATCGGCACAGTTTAGTATTGGTA 68239 28 96.4 33 ........T................... TGGCAGTTGCAAGATGTCAAAAGGTGTACTTTT GGG [68256] 68303 28 96.4 33 ...T........................ CGACTGGGCACAAAGTATACAGTCGCGTGTCCT 68364 28 100.0 33 ............................ CCGCACCCCCAGTCCTTTCGAAGGGGATATCGG 68425 28 96.4 33 .........................C.. TAATTTCGGTTGTTGGAAAAGCAAAAATACTCA 68486 28 96.4 33 .....................A...... CACGAAACGGATACGGTCAATTCAGATGGAATA 68547 28 96.4 33 ....A....................... TCACGTGCAGGTGCAGTGGTTGTATGATGATGC 68608 28 92.9 0 ....A.........T............. | ========== ====== ====== ====== ============================ ==================================== ================== 15 28 96.7 33 ATTCTCCCCGCATGCGCGGGGGTCAACC # Left flank : CTCTTGGTATTGCTAACCACAGCATGCCTATGTATGTGCCCGGTGAAGAGTCGAAGGACATTTTGGGCGAGGTGGGACGCCAGAAAAAAGAGATGGAGAGCCTTTCAAAGCATCAATGGGAGGCTGAGTGGCTTAAAAGACATCATCTTATGGTCGACGGTGTATATGCTGCGGAAGTGGCTAATATTATTTCGCTTACTCAGGAGAATAGCACTGCGGCCGTGGTTATCCGGGCGGACGAAGATATTTGCGCACAGGATATGCTTGAGAGTATTGAAAAAGCCAACACACATGTTGTACTGGTTGAAGGTGTAGTGGGTTGTGCAAGTGACGCTTTTACGTTGGCATTGCTACGCAGAACCAATAAGCGGCTCATTTTATCTGTAGACGATGATCGGACTGTTGATGCTATTTCAAATGTCATCAAAAAAGTGGCACCAATCGTAGGGTAACAATCCGTGTTTTTCGATAGATTTTGTATCTTTGCAACATCTTTATGT # Right flank : CTGATTTCATAGTCGATGCTTACACAACTTTGTTTTTTTCCCTGCATATGCAGGGATGTAGCTTCTTTACTACACAAAATTGCTTGGAGGAAATCACATGAGCGTTTCTATCAGCAGACCACAAATCACAGCGAGGATATCCGATTTGGTTAAAAAGCATATAGACCCCAATAATGACCCTCGTATTTACTGGGCGAAAGAGGTTACGTTCGATTACGCCTCTGAACACTCGATACGCGTAGATTTTATGAGGTACAAGCCTGCAAACAACTCGGTTTCAGGTATCGAAAAGGGGGATTTCTATTGCTACGAGGTGAAATCATCCGAGGAAGACTTTCATTCGAAGAATGGTCATAATTTCATCGGGGATTTTAACTACTACGTTATGCCCGAGGATGTTTATGAGAATGTCAAGAAACTCATCCCGTGGGATGTTGGCGTTTACGTTCCGGACGACTCGAGTTTGCACTGCGTCAAGAAAGCCAGAAGAAAGAACCGAA # Questionable array : NO Score: 2.61 # Score Detail : 1:0, 2:0, 3:0, 4:0.84, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.51, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTCTCCCCGCATGCGCGGGGGTCAACC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [2-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.37 Confidence: MEDIUM] # Array family : NA // Array 3 74494-75554 **** Predicted by CRISPRDetect 2.4 *** >NZ_QUFY01000006.1 Butyricicoccus sp. AF22-28AC AF22-28AC.Scaf6, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 74494 28 100.0 33 ............................ CGCAGTTGTGGCAAGGCGGCCGGTATCTTTTGC 74555 28 100.0 33 ............................ TACCATGATAGCTGGTCGATGTCAAGAAAAATT 74616 28 100.0 32 ............................ AGGTGAACGACAGGTTCATCGAAGGCACCAGC T [74642] 74677 28 92.9 33 ............GA.............. TCCACAAATGGTTGCTCGGTTTAAAGAAAATAC 74738 28 96.4 33 ............G............... CTCTCCGAGTAAGGCGCAAAAATGAAAGTGCAC 74799 28 96.4 33 .C.......................... TAGTAGCACTTGCTAGGGCATATGGTATCTCCA 74860 28 92.9 33 ............G...........T... CAATGGGTATGCCACTTGCAACGCCGAAAAAGA 74921 28 100.0 33 ............................ CTGGAGGTTCCGCGCTTTCCTTCGGTATTTTGA 74982 28 100.0 33 ............................ TATGCAGATCCTCGGCGATGGTTTTGTTCTCAA 75043 28 96.4 30 ...........G................ TATTGAGTATGCTTCGCTGACAGAAGAAAC 75101 28 100.0 33 ............................ CGGCTATGTAGACGGCGCAAACGGCCGCCTAAA 75162 28 92.9 33 ...CT....................... CAATTCGATATGCCTCCGGCTCGCAGAGCATCG 75223 28 100.0 33 ............................ CGCATCTGGGACAGATCGTGCTGATATGCCTGC 75284 28 96.4 32 .........................C.. TCAGCCTATTGTCGCTTACACGACTTTCAAGG 75344 28 92.9 33 ...........G..T............. CGGTTATACTTTCGTGTTAGATTACTGGTGTGA 75405 28 92.9 33 ....C......G................ CAGGGTGACGGTGATGGTGGCGTCCTTTTCTGA 75466 28 100.0 33 ............................ TGGGGTATGCCGATGAGAGCGGACCGAAACAGC 75527 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 18 28 97.2 33 ATTTACCCCGCATGCGCGGGGATCAACC # Left flank : GATACACTGGCAGCCATTGCATTCGGCAGTGAGCCAGCGCTCAAGGAGTTTATGAAGGATAAGCCGGTACCGCGTTCAGAAAGTATTGTAACCAAGCAGATGCTCATTCGAGTTTGTGTAAGCGCCGCGTACATCACGGGTATTTGTCTGTCGATCCTGTTCTTGCCGGCTGTGCGCAATCTGTTTGGCCTTGTGGATGTGACATATCTCAAGTCTGCACTGTTTGCAACCTTCATGATGGCGATTACCTTCAATGGCTTTAACGCACGTACAGATCATTTTAATCCATTTGAGAATATTGGACGCAACAAGAATTTCCTGCTGGTCATGGGGGCCATCTTGGTTATGCAGTTTATCTTCGTCACTTTTGGCGGAGAGGCACTCAGCGTCGAACGCCTGAGCCTGCCTTCTTGGCTGATTTGTGCAGCTCTTGCATTTATAGTTATCCCCATTAACATGATTCTGAAAACAATTATGCATAAAAAATAACATTTTTGAGT # Right flank : CATGATGCTCTCGCAGCTGAAACAGAGGGAATGTCAAAGGTTGCACAAAAATTCCATTGGTGATATAATACCAATATACGCTGAATAACAAAACGTGCAATACTGGGGAAGGAGAAACGTCATGGACTCAAATATACATGTAAGCGAGTTTGATACCTTCTTCGTTCCAAACCGAACTACCACGCAATTTTTGCGCGTTATTTCCTTTAATCCAGAAGTTCAGGCTTCCATAAAAAAATATTATATGGAAGCTGTTCACGCTGGTGTAGTTATGGAAGGGGAATTGCAAAATCCCACACCGCAACAGTTGACGTATTATAACGAGATAATGCCTTCTGGTTTTAAACTGGATGTTGGTTTTATATCGGACAGCCTTCGTGTATGGCTTCCTCGTATGAACTCAACTCCGCGCACGCGAATGTCAGAGGCCATGTATGATGTGCTTACTGGCCTGCGAAAAAAAGGAAAGACCGAGAGTATCCTGCAAAACGCATATATCA # Questionable array : NO Score: 5.93 # Score Detail : 1:0, 2:3, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.81, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTACCCCGCATGCGCGGGGATCAACC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [5-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.42,0 Confidence: HIGH] # Array family : NA // Array 4 116434-116286 **** Predicted by CRISPRDetect 2.4 *** >NZ_QUFY01000006.1 Butyricicoccus sp. AF22-28AC AF22-28AC.Scaf6, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 116433 28 100.0 33 ............................ GCCAGGTGTGACCGAGCTCTTTGTAATGTTAAG 116372 28 100.0 31 ............................ GCGTACTTCAGGAGTGTAAGGCTGGGCAATA 116313 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 3 28 100.0 32 GGTTGACCCCCGCACTGGCGGGGAAAAC # Left flank : GGCGGGGAAAACGTTTGACTGCAAACTTTTTCTCCTCTATACTAC # Right flank : ACTTTAAAAAGTGCAGGAAAATCATGTGATTTCTTATTTATACGCGGAGATGCTTGCGGATAGTGATTACACTTCCGATGATGCCAACGCCCAAACCAAGCATCAACGTCAACCCTGCCAGAGGAAGAGCAATATCCTTGTAAGGCATAAACGCAACGATAGAAAGCGCACCTGATTTCGTCATCATGTTGGAAACCGCCGTATAAACGCCAGAAGAAAACAAGTATGCTATGACAGCACCGATGATACCCACTACGCATCCTTCTACGATAAATGGAAAGCGGATAAAACCGTCGTAAGCGCCCATCATCTTCATAACAGAGATTTCGTCCTTACGCGCCAGCATTGTCAGGTTGATGGTATTGGTCATAATAACGATAGCGATGGCCAGAAGCATAATGGCCAATACAATGCCAACAACCGTTACAACTCTCTGTACTGCCGAAAATCCGTCCGAAACCTTTTCGTCTAAGCGGATATCGTCAATTCCCTCAATAGCT # Questionable array : NO Score: 2.67 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGTTGACCCCCGCACTGGCGGGGAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-12.30,-12.20] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [63.3-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.37 Confidence: LOW] # Array family : NA //