Array 1 42540-39492 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAEKIW010000001.1 Archaeoglobus neptunius strain SE56 NODE_1_length_216750_cov_20.915623, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ================================================== ================== 42539 30 100.0 38 .............................. AAGGCATTCACAAAGGATGGAAAGATAAAGATGAGCTA 42471 30 100.0 38 .............................. TAACTCGTTCCACCAGAACTGCCGAAGCAGTGCAGCAG 42403 30 100.0 36 .............................. TTTTATCTGTATTATGAAATTTATTCTGCGACGAAT 42337 30 100.0 38 .............................. GAGGGATATGATTCCCACAATAACAACAAATGTAAACG 42269 30 100.0 40 .............................. AAGAGTTCAGAAATGACTTTGCGAGGCTGCGTAATCTTTT 42199 30 100.0 45 .............................. CACGCCCCCTAACAACATCAGCAATCCACATCACGAAGCTCATGT 42124 30 100.0 38 .............................. GATTTGCAATGTTAAACACCGCAAGAGCTGATAGGATA 42056 30 100.0 38 .............................. AATGATACCTTTAATGTTCCGTTATCTTTCTGATATAC 41988 30 100.0 37 .............................. GGAGATGGTGAACACAATGATAGGCCAGCTCGTCAGG 41921 30 100.0 39 .............................. TTGTCGAGATACAGCGAATACACTGCAGAGTCTAAGAAA 41852 30 100.0 37 .............................. CATTTAGCATACAAATCATTAGAACTTATACTAATCT 41785 30 100.0 38 .............................. GATTATAGCCTCTACAGGCGCTGCGGCGAGGAGCCACC 41717 30 100.0 38 .............................. GAAGAATGCAACGGACTACAACATAGATTACTGGTACT 41649 30 100.0 39 .............................. CAATGACCGGAGAGATGGTAGATAGAGGCGGTAACGCCT 41580 30 100.0 39 .............................. CCCACTCTTTTGCGAACCATGAGACCGCATGACTGACGA 41511 30 100.0 37 .............................. TGTATAGCCGCATTTTTGACATTTAACGTTAATACCG 41444 30 100.0 36 .............................. TTTTTATTGAGAGATACAGATACTAGTCTATTTGGA 41378 30 100.0 35 .............................. CTTAGCATTCTCATATTGACTTCTTTGATATATCT 41313 30 100.0 35 .............................. ATTTTGAGGGAGTTTGACATATACAATCAGTGGCT 41248 30 100.0 50 .............................. AGTTGCTTAGGACCTTCCACATGAACTTTCTTAACGACAATGCCTTTTCC 41168 30 100.0 46 .............................. CTGGCAGCCTTGCAAAGCTCTTCCCCGTTGCGAGGCCGAAGCTCGT 41092 30 100.0 38 .............................. GAGATACAGAGCTTTGAAGAGGGAAGCAATAGAGGTAA 41024 30 100.0 37 .............................. TTTTCTTACCTGAGACTCTTCTTTGTTCTTCATTTTC 40957 30 100.0 35 .............................. GACCATCAGCGAAAGTTTCTTCGTCCGAGCTCCCA 40892 30 100.0 34 .............................. AAGGCCCTCCCGATGCTGTTCGAAGTCAATACAA 40828 30 100.0 38 .............................. GTGAACCAACATTTATATAACATATGTCTGTTCATTCT 40760 30 100.0 38 .............................. ATCAACTGCGATTCATAGCAGCCCATCACGCATCAGCC 40692 30 100.0 38 .............................. GTATTGTCGTCAACAGCAACGTCACGAACGTTATCGGG 40624 30 100.0 42 .............................. GAGGATATATCGTTCTCCGACTATCAGGACGCATTTTATGAT 40552 30 100.0 41 .............................. ATACGCAGTCCCTGACCCGCAACTGCCTTCCCCATATGTAC 40481 30 100.0 40 .............................. CTCTGTCACCATACTCTCCTGAAGTCGTCAAGGGTCACAA 40411 30 100.0 38 .............................. GATCACATTCAAAACTGCAGACGACAGCGGAAACGGCA 40343 30 100.0 46 .............................. AGAGCTAAAACAGAAAAGAGAAGAAGCCATCAGGAATGCCGAACTT 40267 30 100.0 37 .............................. AAGTGTGGTAGTGGATATCTGTACAAATATAAAAGCA 40200 30 100.0 35 .............................. GTTTTCAGCAATAACCATATCTCCGTCTTTGTACA 40135 30 100.0 34 .............................. CAATTGATGCAAATCTCAGCTTTAACTCTGCAAG 40071 30 100.0 35 .............................. AAGGCCCTCCCGATGCTGTTCGAAGTCAATACAAG 40006 30 100.0 42 .............................. TAAGTCTAATTGTTCGTTAGAATCACATATTCCGTGAAATTT 39934 30 100.0 40 .............................. TAGGAAGTATCTCAAGAAACATGAAAATGCGCCGATTAAA 39864 30 100.0 37 .............................. CTTTTCAAGATATTTCAACCACATTTTTTCTAAAGTA 39797 30 96.7 37 ................A............. GTTTACGTCGGGCTGATGCTGAATACAGTGTTCGCAG 39730 30 96.7 40 ................A............. ACGCCAGCGAGGCCGATCAAGATTATCTTCAGATACTTCT 39660 30 96.7 38 ................A............. AGATACTGAACAGCTAATTCCGTCGTTGAGCACGTTAT 39592 30 96.7 41 ................A............. TTGAGTAAAAGAATACTATGAGCAGCACTGCTCCTGCCAGA 39521 30 93.3 0 ................AA............ | ========== ====== ====== ====== ============================== ================================================== ================== 45 30 99.6 39 GTTGAAATCAGACCAAGGTGGGATTGAAAG # Left flank : GTACCTCATCGGAGAGAAAGTATCCCCACTACTTTAAAAACATTTGGAAAGGCTTCAAATTTATCAATGTTCAGTAACGTCAACTGCCGTTGTTGCCGGAAGATACCGGATGAAATGTTATGGGTTAGCTGTCAGTCACGCTTGCCAAATCATCTTTAATCCGAAAATAAGAGCTGCTATGGTCAAATTTCAGTATTTTCTTAAGTGTATGGCCGTCGTAAATCAAATTATTTTTAATTTTTAATAGCATAAACTTTTAATTTTTACTTCCTTCGTTTTTAAAACCTGCTGGCGAAAATTTTATTTAATGGTATAATCACGCCGATTCACCTTTAATTTCCTTAAAATGTGATCTGGTTCGTCCAATTTGAAATAAATCTCCAGAATAAAAGTCGCATATCTTTATAAATGGTCTGCAACTCTGGGGATTTACGACAGTATATAAACTAAAGAAGGGTTGAGAAAGCTTTAAATTAGAAATGAAAGAAATATTACCAGAG # Right flank : GATTCTAATTTTCAAAAAATCTTTCAACAAACCGCCCTTCCTTCCTCAATATCTCAACCTTCTTCATGAAGTCCATGCTACCTATCCCCAAGTCGTCGAGTTCCACAGTAATTGTGCCATCGTATCCCAAATCGGAAATGAGTCTTAACGATTCTGCAACCTCCTCACCTTTGCTTGGCTGAATGTGCCTCCCCCTCTCATCGTAGTAGCTCACATGAATGTTGCAGATTCTGCTGAATAGGGCATCTAAAAACTCCTCGACACCACCATTCATCAGAGCGTGCTTTATATCCAGCGTAAATTCCAGTTCATGAGCTTCAATAAATCCCTTCGTTTCACTTGCCCTTTTGCACAGATGATTTATCCCGTTCTCTGAATTTTCCAGAGCGATCTTCACACCTTTTATCTTTCCATAACCGCTCAAAATTCTGAGATATCTGTCGAGAGAGAGATAATCCGCCCATACTGGTTCTCTTGCTGCACTTCTCTTTCCTGCATGG # Questionable array : NO Score: 9.24 # Score Detail : 1:0, 2:3, 3:3, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAAATCAGACCAAGGTGGGATTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.70,-2.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : NA // Array 1 59884-65835 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAEKIW010000014.1 Archaeoglobus neptunius strain SE56 NODE_14_length_67218_cov_22.526837, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ========================================================================= ================== 59884 30 100.0 73 .............................. GGTTGAACAAGGGTAAAGACGCTTATTAACCTTATTAACTTCAGTTAATAACCTGCCTTTCTCTTCTCTTTCT 59987 30 100.0 36 .............................. ATATGTGGACTACATGTGGATCGCAACGAGAAATGT 60053 30 100.0 37 .............................. AGCTCACCAACTCTACAACCAGATTCCCACAAAACAG 60120 30 100.0 37 .............................. AGATATAAATCTGCCTGATCTGGTTTAATTTGTTCAC 60187 30 100.0 35 .............................. ATTCTTAGGGATCCATCTCCGCTCTCCAACCAAAA 60252 30 100.0 38 .............................. TCTGAGGTAAGAAGCTTCAATGGTATAACCTGCTTTGA 60320 30 100.0 48 .............................. CGTGGCACAGTTGACTATCAACACGGCTATGTCCTCTCTCACAACCTC 60398 30 100.0 39 .............................. AGAGAAACTAAATCCTTTCTGGTTTGCTCTGTTATTTGT 60467 30 100.0 43 .............................. GCGGAAAGCTGCACTACGTTGCACCGGATGGGCGGCTATGTGG 60540 30 100.0 48 .............................. CAGGTAGCCCTATTGCAAACTTAACTCCCCCAAGCCTTGCGACAGTTC 60618 30 100.0 40 .............................. GTAAACCATTCTGAGCTTCTCCCGCAAGCTGAAAAGCCGG 60688 30 100.0 39 .............................. CTGTATCAGAAGGGTATACTGAAAGCACAAAAAGAAACG 60757 30 100.0 38 .............................. GTTCAAGAGGAGTCACGTTCCAATCGGGCTAATGATAA 60825 30 100.0 38 .............................. CATCTTCATCGTATTTTTTCAGAATTTCCTGCTTCACT 60893 30 100.0 38 .............................. GCATACAAGGAAATGATGCTGGACATCGAGTACTGGGA 60961 30 100.0 44 .............................. CCTATACTGGGATGGACATTCACAGTAATTACATATCTGAGCTT 61035 30 100.0 38 .............................. TCAATTCTTCCATCAAGACTAAACTTGAATTATGTGGC 61103 30 100.0 38 .............................. AGGCTCTTGTTCCTGTGAGGTCTAAACGTATGGGGTTT 61171 30 100.0 37 .............................. TATCCTTTGAGCCGCTCATAATAAGTTCCTGATAAGC 61238 30 100.0 39 .............................. AGAAATCTAATACTCAACCTCGACAGCCATGTCGAAAAA 61307 30 100.0 37 .............................. GGTCTCGCTGAGGGGGATCGTCAGCTCTGGATCCAGA 61374 30 100.0 36 .............................. ACTGGTGGTTTTTGGCTCCAACCCTCTGTATTCAAT 61440 30 100.0 38 .............................. GCCTTGCTGGCTTTGTTGTTGCGAAGGTTCTGCTCGCC 61508 30 100.0 38 .............................. CATCTTCATCGTATTTTTTTAGAATTTCTTGCTTTACT 61576 30 100.0 38 .............................. TCTCTGCGAGTTCAGAGAGGGCTCTGTTGTTAAGAGAG 61644 30 100.0 37 .............................. TTTTATCTGTATTATGAAATTTATTCTGCGACGAATT 61711 30 100.0 37 .............................. AAACATCATATAAACTCAAACAAGCTCCTTATGCCCT 61778 30 100.0 38 .............................. CGTACATCGTGCTGGCGAACCACTCAGCATGCTGTTCC 61846 30 100.0 38 .............................. CGTACATCTGTTTAATCTCGGAATCGGAAAGAGCACGG 61914 30 100.0 38 .............................. CTTTTTGTGTGAACTATAAAGAGATAGTAGCCGTCGTT 61982 30 100.0 48 .............................. ATGGAACTCTTGTTTACATAATTCTTGAAACTGCTGAGGCAGAATTTG 62060 30 100.0 37 .............................. AAACAAGCGATAACAATCACAGCTTGGATAAAACCGA 62127 30 100.0 36 .............................. AAGCTTGTTATAGATAGCTGGGCTTATGTGGTTGAT 62193 30 100.0 38 .............................. CGATCTGCAGGACCTTGAAGAACAATTGACCAATAACA 62261 30 100.0 38 .............................. TACTAACTGAATTATTAATAAGATAAGAACATGTATCA 62329 30 100.0 38 .............................. TTAGATTTTTTTATTTGGTAGGTGAAAGGCAGATAAAA 62397 30 100.0 43 .............................. TCTCCCCTTCTGAATGTTAATAGTCTCTTGTACGGTTTCTCGA 62470 30 100.0 38 .............................. GCCTGATATAGCAATAGCCACCAACCACCCTAATTTCT 62538 30 100.0 38 .............................. GCAGCAGAGGACTTAAGCTTCTAACAGTTGCGGCGTTT 62606 30 100.0 39 .............................. CTACAGCCCCGATGGCAAGCATCTTCTGAGTGTCGGTGA 62675 30 100.0 39 .............................. TTTTCGAGGAGGATCCTGACGAAGAGAATTTCGATTACC 62744 30 100.0 39 .............................. CTTGAAGGTTGGATCATATGAAATATGCCAACTCCTCCA 62813 30 100.0 37 .............................. ATTTTAACTTTCATAATAGATATTCCGCTAAAAAATA 62880 30 100.0 42 .............................. GTTTGCCGGTGAGGAGTATTATTCAATCCTCGAGGAGGTGAA 62952 30 100.0 41 .............................. AAGAGTCTGGCAAAATCCACGTCCCTGTATCCGTACTCTTC 63023 30 100.0 38 .............................. TATAAACCTGAAAATAAACCAGCATGCACTATTTTCAT 63091 30 100.0 36 .............................. AGCGTTCCGCTAACGGGTAATCTTGTTGTGCTGAAG 63157 30 100.0 37 .............................. TCTCAAATTTTGCGTAAGGTTTCCATAGCCTTGCCAA 63224 30 100.0 33 .............................. CGTGATTCATCAACCCAAACTTTTGCCTTTACC 63287 30 100.0 36 .............................. ATTCCTGAACCCGTGAGGGTTGCAGCGGTCCAAACA 63353 30 100.0 37 .............................. GGAGAACGGGATAGAGATCAGTGTCGGAAAAGGGCAG 63420 30 100.0 36 .............................. ATCTTCTCGAAATCGACATTATTCAGGGCACCGCCA 63486 30 100.0 38 .............................. CTAGACGCATCACTCGCACAGACCTTCAAGCTCAGCGT 63554 30 100.0 37 .............................. AGTATTCTGTTTACCACTTCAACCTGCTCCCTGACTT 63621 30 100.0 37 .............................. ATCATCTCAAGAGATGCCTCGAGCAGCTTAACTGCAG 63688 30 100.0 36 .............................. GAATGGTAAACTTCCCATTCTCGACTTTTGGAAGGA 63754 30 100.0 39 .............................. TTTCTCTGAGCTTTGAGGATGTGTCTTCAAAGATGCAGA 63823 30 100.0 37 .............................. GCCGTATTGAGCAAGCCACATGAAGACCTGTGCCTGA 63890 30 100.0 39 .............................. ATTCGGTGTCTCCTCTGTTGGTTTAATCCAAGCTGTAAG 63959 30 100.0 37 .............................. CTTCTTGCCGATCTGTATGATCACAGCCTCGAGGGGA 64026 30 100.0 39 .............................. GCTATATTTCTGCTGCAATGTGGGTTTATCGTCGAAGCT 64095 30 100.0 40 .............................. TTGGTGCTGGTGCCGCACCTCTATATATCCTCATTCCCTC 64165 30 100.0 36 .............................. ATTTCAGCCGTTTTGATAGTTTTGGGATTGAGGTAT 64231 30 100.0 38 .............................. TTATTTGGTCAATCTGTTCGCTGATTCTGCGCTTGTAA 64299 30 100.0 38 .............................. CGTGATTCATCAACCCAAACTTTTGCCTTTACCTGCAA 64367 30 100.0 38 .............................. CGTGATTCATCAACCCAAACTTTTGCCTTTACCTGCAA 64435 30 100.0 36 .............................. GATACCTTTCAGACCCGGACACTGATGCATTCTATA 64501 30 100.0 49 .............................. ACGATCTGCGCTGATTGTCGTTCATTGCTGGAATGGATTGTTGACCAGC 64580 30 100.0 39 .............................. TGTTCTAAGAGCTTTGGAAGAGGAGGGCTATATCAAGAG 64649 30 100.0 37 .............................. GCTTGCAGTGTAGCTGTAGGTGTTGCCTTCTGTAAGC 64716 30 100.0 36 .............................. TACAGTTGCAGATGATGAAGAATGATGAACTTGAAC 64782 30 96.7 38 ................G............. CGTTTTACTGCTTTTTCAATGCATGAAGTGGATAATTA 64850 30 96.7 38 ................G............. ACACCTTCTCAGATCCGGGAGTGCACAGGGTTTATGCT 64918 30 96.7 37 ................G............. GTTTGCGTTGGGTCTGCTACGTCAGTTCCATCTCCAA 64985 30 96.7 37 ................G............. TCCCCCACCACTGCCTTGCCGGTATGTACTGACTCTC 65052 30 96.7 36 ................G............. CTGGTACTGCATAAACTGCTATTAATATATTCATAA 65118 30 96.7 38 ................G............. TTAAGCTCAATGCAATCGCTTTTATACTGCACATAATC 65186 30 96.7 38 ................G............. GTTACACTGTCGATAAATGAGAAATTAAAAGAGCTTGC 65254 30 96.7 37 ................G............. GGAACTAAGGCAGAGGAGATAAAGACGGAGATGTTCT 65321 30 96.7 45 ................G............. ACTTACGACATAGCTTATGCATTCAAGAGGCAATCACCTGCAAAA 65396 30 96.7 40 ................G............. TTGGGTAAGGGTTATCGTGAAACAATTGACTTCAGCAACC 65466 30 96.7 40 ................G............. CTCATTTCTCACCACCCATAACGTCTTTTGCTTTAGCTGA 65536 30 96.7 38 ................G............. GTAGTATGCTCACAACGATGAAAATCGGTATTACTCCC 65604 30 96.7 38 ................G............. ATTGCTTGAACAACCTGAGCGATTATCGAGACGAACTT 65672 30 100.0 37 .............................. ACAACACCATACTTATCCACCCAATAACTGATGTTGT 65739 30 96.7 37 ................G............. CGGACGGGAGCACTCCACCCTGACGGGGTCAAAATAG 65806 30 96.7 0 ................G............. | ========== ====== ====== ====== ============================== ========================================================================= ================== 87 30 99.4 39 GTTGAAATCAGACCAAAGTGGGATTGAAAG # Left flank : CTGAAAAGCCAGAGCTTGGTCTTGCACACGAAATAATAGTTAACCTCCACACCTCTAATGTACATTTCATCAATCATAAATTAACTACCTTATTGTACAATAAATAACTTACTTCACACCGATTTCTGCATTGAGTTTAGCCTGAAGAGAAATCGCAAAAATCGGAATAAACTGTTTAAAAAGGAGTTGGGCTGAAAAACGGCTGTTTGATATGGTCGCAAAACAAATTATTTTGTACTTTTTATTATGCATATTTTTAGTTTTTATTTCCTTTATTTTAAAAACAGAGTGGTCAAATTTTTATTTTCAATTCCACCCATGTTAATTTGCCTTTAATTTCCTTAAAAAGTGATCTGATTCGCCCAATTTGAAATAAATCTCCAGAATAAAAGTCGCACATCTTTATAAATGGTCCGCAACTTTGGGGATTCACGACAGTATATGAACTAAAGAAGGATTGAGAAAGCTTTAAATTAGAAATGAAAGAAATATTACCAGAG # Right flank : GGCTTTATGGTTTTAAGGCTAGTTCCATCTGTTCCTTTTGTTGAAATCAGCATTGTTTAGTATGGGACACGTAGACAATCAAAATGCCAGAATTTCAGCAAATCGAAATAAAAATATGGCATCTGCCACGTTCCATGGACTGGATCTCAAGCTGCCTGTTGATATCGGACAAGACTGGTACTACCTTCGAGTAATTGAAGTTGTCATAGAGATCCCGCGAAATCAAAATCGAGACAGAATGACGAATTTTCTAAGGTCTTCATTAACTCTAAAGGTTCCGTTCTCCGTTGTTACATCATCCCCAGATACAATAATCTTTTTTCCCGGCTTTATTCCAACATCGCCAAGTTTTGACGGTGCAACAACCACCAGAAATTCGCCTTCGACCACATTGTTCAGACTAACAAGCTCCTGGGTGCAGAAGTCGCAAACTTCACAGTCCCCGGCTATAATTCGGCATATTCTGACGAAAGCATCTTCTGTAATGTGATGTTCAAGCT # Questionable array : NO Score: 9.20 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:-0.02, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAAATCAGACCAAAGTGGGATTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.20,-0.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [73.3-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0 Confidence: HIGH] # Array family : NA //