Array 1 72030-74498 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABEGJ010000098.1 Klebsiella variicola isolate k_variicola_3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 72030 29 100.0 32 ............................. CAGCGCCTGGGAGGGATTCCGGATCCAGGTTA 72091 29 100.0 32 ............................. TCGACAGCCGTGACCATGATGCGCTGTCGAGA 72152 29 100.0 32 ............................. TTCGATGCTGACCTTAATATTGATTACGGTGA 72213 29 100.0 32 ............................. CATTTCAATAACGCGACAGTGTTCTACTGTTA 72274 29 100.0 32 ............................. AATTGGAGAGGTTTAATGTTCGGGATGCTGAC 72335 29 100.0 32 ............................. TTGGCTTACCCGGGAGATCAGTAACCCGCAGT 72396 29 100.0 32 ............................. GTAGTGAACATCAGAGCCAATGGTGATCTGCA 72457 29 100.0 32 ............................. TCCCGCCTCAACAATCCCCAGCGCATGACCAT 72518 29 100.0 32 ............................. TGTCCTCAATCTCCCACACTCGGCATGCATAT 72579 29 100.0 32 ............................. CGTGGTTTTGAATGGCAAATCGTCTTCTGACG 72640 29 100.0 32 ............................. GCGATAGAAACAGAGGGGTATTTTGGGCGCGG 72701 29 100.0 32 ............................. GGTTCGGCGGCGACGCTAAATCGGCGCAGGCG 72762 29 100.0 32 ............................. TTTTTAAAAAGGCGATAGAAACAGAGGGGTAT 72823 29 100.0 32 ............................. GTATAGAGAACGCCGCACAGCGCATTAACCGT 72884 29 100.0 32 ............................. GTGGTACGCCAGTTGTCCCGCTCCTGCTGCGC 72945 29 100.0 32 ............................. TTCGGCGACGGCTACGAGCAGGTCGCGCCGGA 73006 29 100.0 32 ............................. CATTATCGGGGCCGGTGAAATGCCGCGCCCTC 73067 29 100.0 32 ............................. CCCCATTACGGGAGGTGCTCTTGCCTGATAAC 73128 29 100.0 32 ............................. GTTGAACACTCAGGCGCCCTTGCCGTGAGCTC 73189 29 100.0 32 ............................. GGTTCATCAATCGCTCTCGTTCTGCCCGTTGA 73250 29 100.0 32 ............................. GCGATAGCGAATACTCAACATCGCAATATGAC 73311 29 100.0 32 ............................. CGCTGCCAGTGCAGCGGGACGGGGAAGACACT 73372 29 100.0 32 ............................. ATCGCCGGGGCGCTCAATACCGCCGCACTGGG 73433 29 100.0 32 ............................. CTCGTAGTGGTCAGGAGACAGAGTGATGGCAG 73494 29 100.0 32 ............................. GCGCAGCCGCTGAAAGTATCAGGTACTAAGGC 73555 29 100.0 32 ............................. TAGTAGGGCGGTGAGCCGTCTTGCTGTTCGAA 73616 29 100.0 32 ............................. CTTGAGGGAGTGGATAATTGACTGCACATCCT 73677 29 100.0 32 ............................. GCTCGTTGTTTTCCCGTCGAACGCGCCGGAAA 73738 29 100.0 32 ............................. GACCTCCCATGATTAACGAATATAAAACCGTG 73799 29 100.0 32 ............................. GCGGCACCTGGTCGATAAAAGGTGATGGCGAA 73860 29 100.0 32 ............................. AGCTCCGCATCCGCAGCAGAAACAAATCCAGT 73921 29 100.0 32 ............................. AAATATAATGGGAATTGCCCCGCTCCGGCGGG 73982 29 100.0 32 ............................. CGGGATCGCTGCCACCAAACGGCTGATAATGG 74043 29 100.0 32 ............................. CTCGCCCCAGTCCGGTTTGCTCATCAACTACT 74104 29 100.0 32 ............................. GCGGCAACGCCTCACAGATGCACAAATAAATT 74165 29 100.0 32 ............................. CGAAGACACGCTGGCACAGATTGCCGAGCTAA 74226 29 100.0 32 ............................. CATGTCAGCCCCTCAATGTTATAGCGCTGCTG 74287 29 100.0 32 ............................. TTCAATGCGGCGATAACTTCCTTTAAATCCAC 74348 29 100.0 32 ............................. GGTTGCGACATCGCGCCAGGTATTAATCACGG 74409 29 96.6 32 ............................A TCGACGATGTTCTGCGTGATGGTGATGTATGC 74470 28 82.8 0 ...........TT..-.........G..C | A [74481] ========== ====== ====== ====== ============================= ================================ ================== 41 29 99.5 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : TGTTCTTGCGGCAGGCGAAATTCAGCCACCCCCACCACCTGAAGACGCACATCCTGTAGCTATCCCACTCCCTGTCTCTTTAGGTGATGCAGGCCATCGGAGTCGTTAACGATGAGTATGTTGGTTGTGGTGACAGAGAATGTTCCTCCGCGACTCCGTGGACGGTTAGCCGTCTGGTTGCTGGAGATTCGCGCTGGTGTGTATGTTGGGGACATCTCAACAAAGACACGAGAAATGATATGGCAACAGGTTTCCGTTCTAGCAGAAGAGGGGAATGTTGTTATGGCTTGGGCGACGAATACCGAATCCGGATTTGAGTTTCAGACATATGGTGTGAATAGACGTATTCCGGTGGATTTGGATGGACTGCGGTTAGTATCTTTCCTTCCTGTTTTAAAACAATGAGTTATATGCTCTTTAATAATGTAAAATTGTTGCTTAATTGTTGGTGAATTGTTTTTCAGTTAAAAGCTATTGATATTGAAGTCTATTTTTTTAGT # Right flank : CGCAATTAACAATCAGGCGCCATCTCATAGGCTGTTTGATGGCGCAGGATCAGCACCGCTTGCCACCAGCCCTGCGCCTGAGCTTTTTTGTGTCCTTTTGTCGGCAAAGCATTGGTAAACGCTTGGGCGGCGTCTCTATCCTCAGTTAGCGCAAAATAGGCCAGAGCTTTTGCTACTGGCCCGTGCGCATCAGGCGTCGTGCGAGCAGATTGCGTAGCCTGGCGTCGGCGCTTTCGCGCCCGGCATTTTTCGGCATATTAAGATCAGAAGGAGAAGGTGCCGGGACATATTTATCCACGAAAGCAATGAGCTCATTGACCGTTAGCACCCGTTCGGCAATGTGCGCGACATCCGGCCAGTAATTTTCTTTCGCCTGATACATCAACCACATCGCCTGCAGATAGTCGTCGCGGTTGAGCGCGAGTATCGCCTGCTCGGCGTGAATACGGCAGACCGGCGTCACAAACTCCTCGCTGATAATGTCATCACTAGACTGCTGG # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //