Array 1 4841-6979 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAEQAX010000231.1 Streptomyces sp. MBT58 scaffold231_size9064_cov92.2332, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 4841 29 100.0 32 ............................. GCGCGACCACCACCGCGCCCCGCCTGCACACC 4902 29 100.0 32 ............................. CCGTTCAAGATCGAGCCGCTGGACATCCAGCT 4963 29 100.0 32 ............................. TGAGTCTCAGTGAGGCCCATACCGTCTCCGTG 5024 29 100.0 32 ............................. TTCCGCTTGGCCCAGACGATTTCCGCACGGAG 5085 29 100.0 32 ............................. CGGTGGCCGCGTGAGGTGCGCACGATGCGACG 5146 29 100.0 32 ............................. AAATTCCACGGCAGCACCGCAACCGCGGGCTC 5207 29 100.0 32 ............................. TCGCGGCACCGCGCCCCGCCGGCCCCGGCCGC 5268 29 100.0 32 ............................. GTCGACAGCATCATGTGGCCGTTGCTCGGCAC 5329 29 100.0 32 ............................. TCCCTGAAGACCTGACGCCGTACTGATGGAGA 5390 29 100.0 32 ............................. ACGCCGATGGCCGCGCCGGACGCTGCGAGGCT 5451 29 100.0 32 ............................. GAGGGGCAGGGTGTCGGGCATGCCGGTGGCGG 5512 29 100.0 32 ............................. CGCCTGTCCGAGACCGGCAAGTTCACCGGCGA 5573 29 100.0 32 ............................. ACACCTCGCGCGAGCGCGCGACCTGCCAAAAA 5634 29 100.0 32 ............................. TGGTTCTCCTGCCGGAACTCGCGTAGAGCCCC 5695 29 100.0 32 ............................. CAGGCCGTGGGCGTCGCCCAGTACAACGAGAA 5756 29 100.0 32 ............................. TTGTTCGCCTACAAGCCGTCCAACACCTCCCG 5817 29 100.0 32 ............................. CTCCAGACCGCGAGGAACGGCGCCTTCCAGCT 5878 29 100.0 32 ............................. GTGTGCGCCCCGACCTCGCGCCTGAACGTGGT 5939 29 100.0 32 ............................. TCCGCCAGTGTCGCCTTGGCCAGCTCGCCCGT 6000 29 100.0 32 ............................. AGTCAGTCAGTCGTCGTACCTGTAGGCGTCGG 6061 29 100.0 32 ............................. CGGCTGGACCGGGACCCGGACGGGGTGGCCGA 6122 29 96.6 32 ............................C GGACACCGCCAGTCATGGCTGGAACATCAGCC 6183 29 100.0 32 ............................. TACGGGGGCGCCCTCGCGGGTGCGCCCGTGGC 6244 29 100.0 32 ............................. GTGGCAATGATGCCGTCCAGGAGCGTGCTCTT 6305 29 100.0 32 ............................. TTGCCGTAGACGGCGAGCTGATCAGTGGTGGC 6366 29 100.0 32 ............................. GGGAACATCGGCCCGAAGGTGGCGGAGTCGAT 6427 29 100.0 32 ............................. GGGACGGGTACGGCTTTGCCGACTTGGAGGTG 6488 29 100.0 32 ............................. ACCCTCGACGAGGTGATGACCGAGCGGGACGC 6549 29 100.0 32 ............................. GACGAGGCGCCACCCGCCCCCCTGAAGAAGAC 6610 29 100.0 32 ............................. CCCTCACCGACCGCGAGGCCCGCCGGTCTGCC 6671 29 100.0 32 ............................. ACGGCGGGGATGTCCTCGCGCACGGTGCCCCG 6732 29 100.0 32 ............................. CTCAGCTCGTACGGGAATCCGGGGGCACCGCC 6793 29 100.0 32 ............................. CGTCGGCGTATCCTCCCGCGACTGGGTCACGC T [6797] 6855 29 100.0 32 ............................. TGGCTGTGGACGAACGCGCTGCAGCCTGCGTT 6916 29 100.0 5 ............................. GACCT Deletion [6950] 6950 28 79.3 0 ..C.G...G........C...C..-.... | C,A [6962,6968] ========== ====== ====== ====== ============================= ================================ ================== 36 29 99.3 31 GTGCTCTCCGCGCGAGCGGAGGTGAGCCG # Left flank : CATTGACGTACGCCGGATCGTCACGAACCGGCCCGTAGAGCAGGGGAGCCTGTGCTTGGAAAGGGGGAGAGATCTTGCCGATGTCATGCAAGCCGGCCCAGAACGAGACCACGGAGCGTGCCTCTGCTTGGCCCAGGCCGAGCGCACCCGCAACTGCCGACTTAGTCTCGGTGCTTACCACCACGTCCCAGAGCTCCTGGAACACAGCACTGGTATCCAGCAGATGGCACACCACCGGATACGGACGGGACAGCCCGCTCTCCTTCCCCCACAACCGAACATCCAGAACACAGCATCCCGAGACCCCCGCCTCGCCGCGCTTCAGCATGCCCACAGAGATAGCACCCCCCACTGACACCGGCCTCAAATAGCCCAAGGCGGCATCGAGATGAAGGACGCGCCCTTACACTCGCTGCGCGACGGCAACGAAGCGGGGTCCATGCACGAAGACGATCTGCAAAGAGATGGCAAAGCGTCCGAGTAAGGGCAGGTCGCGAAGG # Right flank : GCGCTCCGCCTCCTGGCCCAGGGCCGTACGCAGGTCGAGATCGCCCGCACCCTGCGGATCCGGCCGGAGACCGTGGGCCGGCTGCTGAACCGCGCCCGCATCCTCCTCCGGGCCCGGACGCTGCCCCACGCCGTCGCCCGCGGCTACAAGGCTGGCCTGCTGGGACCGCCACCGCACGATCAGGGAGCCGGGCAGCCCTCGGGAGCCTCCTGAGCGATCTTCGTCCGCCCTCACTACCTCGTATGGGTCGGGGCGGACGGGAATCGCTCAGAACGGCGCCGGGACCGCCTCCCGGGCCTCTTCTGCCTGACTAGTCGCTACGGCTGCGGCGGCGGCGGCCGCCCACTCCCGCTCGATGCGGTCGCGGTCGGCCTGCGAGGACAGGCGGCACTGACCGCACAGACCTTCGATGACCACCGGCCTGCCACAGGGCCCGTGGTAGCCGGGGCACGTGCCGTCCTCGGCCTCCCGGGCGGGCAGGGTCTCGGCCAGGTGCAGCA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCTCCGCGCGAGCGGAGGTGAGCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCTCCGCGCGAGCGGAGGTGAGCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.70,-10.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [43.3-20.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 4707-5162 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAEQAX010000151.1 Streptomyces sp. MBT58 scaffold151_size37405_cov97.1664, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 4707 29 100.0 32 ............................. GCCCTGGAGGCCGCGCACGGACCCCAGCCGAT 4768 29 96.6 32 A............................ CCGACCCACACGAGCGCGACACCCGCCCCCAC 4829 29 100.0 32 ............................. CACAAGCGGACCATCAAGGTCACGTGCCTCGA 4890 29 100.0 32 ............................. CTCCCGCAGCTCCGCCGACATGATCGGGTACT 4951 29 100.0 32 ............................. GAGAAGACCGAGGCGCGGCTCACCCGGCTGAT 5012 29 100.0 32 ............................. GAGAGCTCGTGTCCGGAGTGGACGAATCCAAG 5073 29 96.6 32 ...G......................... TTCAGAGCACTGAGCGTGCGGCCCTTTGCCTT 5134 29 96.6 0 ............................A | ========== ====== ====== ====== ============================= ================================ ================== 8 29 98.7 32 GTGCTCTCCGCGCGAGCGGAGGTGAGCCG # Left flank : TCCCACGGATCGTCACCGACATTCAGCAACTCCTCGACCCCGACCACACCTACGAAGCACCCGACCCCGCAGAACAAATGGTCGACCTCTGGGACCCCGTCAGCGGCTCCGTACCCGCCAGCATCAACCACGGAAATCAGCCGTGACCCTCCCTACGGAAGAACACCGACCATGTCCTCGATGATCGTCATCTCAGCCACCGCCGTGCCCGACCACCTCCGCGGGGCCCTCACCCGCTGGCTCCTCGAAGTCACACCCGAGCTCTACGTCGGCACCGTCTCTGCCAAAGTCCGCGACGAACTTTGGGCAGCCGTCACCGCCTGCACCAACGACGGTCTGGCAGTTCTCGCCCACCCCGACGACAACGAGCAAGGCTTCCAACTACGCACAGCAGGCACCCGTCGTCGCGAACCTATCGACTTCGACGGACTTACCCTGATCGCCTTCCATCGAGAAAGTCAAGAAATGGCAAACCCCCTCTAACGGGCCAGGTCACGAAG # Right flank : AGCGCTGGACGACTCCCGCCGCGCCCTGGGAACCCCGGGGCGGTGGCAGCCGGTGCAGCGGCGCGGGCAGGGTATGAGCACGACAATCTCCACCGACAGGTGCATCAAGGTCAAGTTCGCCACCGCCGAGAGGTCCACGGAGCGGGACGGCTGGCGTGCCGAGTGGGCGGCGGGGCAGAGAAGATGACGTTCACCCCTTCTGAACTGGGGTGAGAGGGCGCGCCTGAAACCTGGGGAGGTCGAGGGCGCGCCCTTGTGAGTGCGGGCTGGTGGGGTGCCGGCGCTGCGCGGGGGTTGGGGGTCAAGGTCCTGGCCACGAGGACGACGGCTTCTTGCACATCCGCCAAGCACTCAGCCTCGGTGACACCGCCCATCCCGACTCCGTCCGGGCCGGGTGGCCTCCATCTGAACCGCTTCGACGGCCCGACACCCTGTCGGGCGTCGGGCCGTCCCATGCACTGACGTCATCTCCCCGGCTCTGGCTACGTGTAGACGGTCTG # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCTCCGCGCGAGCGGAGGTGAGCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCTCCGCGCGAGCGGAGGTGAGCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.70,-10.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [45.0-18.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //