Array 1 1418272-1414908 **** Predicted by CRISPRDetect 2.4 *** >NZ_JH636435.1 Schlesneria paludicola DSM 18645 Scaffold2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ====================================== ================== 1418271 36 72.2 37 CTCG...C..G.......G.GA..G........... ATAAACGCATCGACGTAGGTGTGCGCGACGCAAACCA 1418198 36 97.2 36 ....................G............... ACGACGAACAAGCAAACGCGGGTGACGCCGCAAGGG 1418126 36 94.4 36 .......C............G............... TCAAGCTGCCCCTGGCTTCAATGCTCTTTGCGCGTC 1418054 36 100.0 38 .................................... GGGACCGGGGCAGATGGTGATTTCTACCTCGACGCCGC 1417980 36 97.2 35 C................................... AATGGACTCGGTCCGGTCACCACGTATTACGAGCA 1417909 36 94.4 36 C...................G............... CCCAGCCGTAACGACGAAAAGGCGGATGGCCGACTC 1417837 36 97.2 38 ....................G............... TATTTCGTCGAGTCGTCATGCGGTTGCCCCTGGATGTC 1417763 36 97.2 36 ....................G............... TTACCACAACTGGAGTGTTAGACTTAGCCACAATCC 1417691 36 100.0 37 .................................... GCACCTGGTCGGATCGTTCGTTCGGAAAATAGCCGTG 1417618 36 100.0 36 .................................... GTGAATACCATTCGGGATTCGGACAGACTACCGCTC 1417546 36 100.0 36 .................................... AAGGAAGCTGCTATGGAACGGGGAACCGATCGTACA 1417474 36 100.0 36 .................................... GAACCTGTCCTGGAAACGCGGCGGGCCCGGCAACTC 1417402 36 100.0 36 .................................... GTGGCGTGTACATCACGTGTCGATCGGCTTGATCGC 1417330 36 100.0 36 .................................... TATCAGTCGCTCTCGGCACTGGAACGCAACCTGCCC 1417258 36 100.0 36 .................................... CTCTCTACTGCTGTTAGTGCAGGAGAACCGATTTTC 1417186 36 100.0 37 .................................... TCACGCGGAGGACGGTTCCTTCAACCAGGGACGACGT 1417113 36 100.0 36 .................................... CAGAAAGCAATAAAAAGTATTGCTCCGGAGTCCATC 1417041 36 100.0 36 .................................... GACGCCTGTTCGTTGGACTTCCCATGCCCATGAAAC 1416969 36 100.0 36 .................................... TCGTCGTCAGGGTTGTAAACGCGAGGGGCAGCAACC 1416897 36 100.0 36 .................................... GTACCGGATTGTGTCCATGATCAACTGATCCCTCTG 1416825 36 100.0 35 .................................... GGCATGACTCCAGAAGAGGAGTCGGCCATCGAAAA 1416754 36 100.0 37 .................................... AAAACTTCGGTGCCAGATCGATCGTGCTGGCACACAG 1416681 36 100.0 37 .................................... GCTGGAATCCGGTGAACCAGAGATCAGTCAGATGCCG 1416608 36 100.0 38 .................................... GTACTCTTCCGATCTGAGCCGATACGCGAAACGTTGCT 1416534 36 100.0 37 .................................... CTACTACACAACGACGACGACTCTTCCGAATCAGCAG 1416461 36 100.0 38 .................................... CAGAACACCGGCCACTTTTTCGTGTCCAAGCATTGACG 1416387 36 100.0 37 .................................... GAATCAGCGTGCCGTTTACCGCAGTCGTGGCAACATT 1416314 36 100.0 36 .................................... AACGCTGCGGGAACGATCGTGAACAAGTGGAGAATC 1416242 36 100.0 36 .................................... CCACTGGCAGCAAGACAGCTTGCTGCCAGTTCTCTT 1416170 36 100.0 36 .................................... CAGATGAGTGCCATCTCTGCCCCCCTGGCGGTGATG 1416098 36 97.2 37 ....................G............... GGGCACACCATCTTTACTTAACTCCTTACCAACCAAA 1416025 36 97.2 37 ....................G............... TCGTCAACTCGTAGACTCCCACCAGCGTCATCATCCG 1415952 36 97.2 36 ....................G............... GTCCGATGTACTCGCGAAGAAAGGGTCCCGCAACAC 1415880 36 97.2 35 ....................G............... CTCGCAGGCGAGCACCTTGCACTTTCCCACAACCG 1415809 36 97.2 36 ....................G............... CTCTTCGTGGTTCTTTATACGCTTTCGCGTTTAATA 1415737 36 97.2 35 ....................G............... CGACTGGACTGGCGCCACGGCAACTGTTGAGTTTG 1415666 36 97.2 35 ....................G............... TCCAAGCTGCCTGCGAACATACATACTTCGGCTCA 1415595 36 97.2 35 ....................G............... CTTGACCGTCGATCAGCTTCGTCGCGGAATTGTTG 1415524 36 97.2 36 ....................G............... GAGTCGGCGTCGGGGTATGTCGAAGATTCGATCCGA 1415452 36 97.2 37 ....................G............... CCGTCCAGTATGAGCCGGGCCACAAGCCAGACAAATC 1415379 36 97.2 37 ....................G............... TAGGGCCTCGCGTACCATGTCCCGCCGATTCTCCGCA 1415306 36 97.2 37 ....................G............... GCTTGATCGAATTGACGATGCAATCAGTTCCGGTCTT 1415233 36 97.2 37 ....................G............... AATATGCGGGTTGTCGGACTGACCGCTACTCCGTTTC 1415160 36 97.2 36 ....................G............... CGTCTCGCAGGGCAGGTTTGACCCGAAGTGCGAATC 1415088 36 97.2 36 ....................G............... AGTGTGACACATGTCATCGAAGGACGAGGACGCATG 1415016 36 97.2 37 ....................G............... TGCCAATGTCAATCTGCGGAGGGTGCCCGTCCGCCTG 1414943 36 97.2 0 ....................G............... | ========== ====== ====== ====== ==================================== ====================================== ================== 47 36 97.9 36 GCTTCAATGGAGCCGCGCTGATTTAGCGCGGAGAAC # Left flank : AGTGAATGGTCGGCCCTACAGGCCTTCAAGGAGTTTTGTGGAACTGGACCCAGCCCGTCGGAGTCCTGCGGCCTCCTTTGGACTGGGCTGGTGGAATGGCTGGGCCTTTGGCCCGCAGGAACCGCCACGGTTGGATCACCTTCTCTCGTTACCAAGTCCCCGCTCCCCTCTCGTTGTTCCTCGTTACCAAGCTCCGCTTGGTAACGCCTCTTGCAATCTCGGTTCCTTCTGACCACCACAACGTGGTGGAGTGAACAAGCCCAGGGGAACGATCGTTTCGATCGTTCCCCTGGGTATGACCATCGTCAAGATTTTGCCCTGTCAGGGCAAAAGGACAGTCCAAATCGGATCATCGATCGCTTCCTGCCGCCCGTTACAGGGCGGTGAATCTTGTGGAGATCTGTTACCTAGGGCCGCGATCGAAGCGATCACAGCCCTGGGCTTTCACCCGTCCGCCCGCTGCGGGGCGGAAGAACGAGCTCACACTCGACGGATCGAAT # Right flank : CGCCCGGGGTCTAAATCTTGACGGGGTGGGCGGTTGTGGGGGCTGTTGCGAGAGGTTGTGATTTTTTTGATTGAAAATCGGCATCTTTAACAACAGCCTTTCTGGAAGGCGTGACAGGCCTTGTGGTTAACGGCTTCGAGCGATCACGGGGTTTCTTGCGGCACCGTACCGCTCGAACAATCGATCTGTCGGATTTCACTCGAATTGCCAAAGATCGTCATCGTCAACCGAAATGACTGTTTGCGAACGGCGATCATATCCGTGTGCGACGCAATTTCAAAAGGATCGTCCACTGCAGTCGCGAAGGCAGGTGATGTCTGCGTGTACTCTGATTGAGTCATCAGTGTGCGGTGAATGGGGTGTCCGAGTTTGCATGCGGGGCGTTCACCGCCGAAGGCAACGCCGGATGGCGTCCACGATTTCATGGCATTTGTAAATCTCGGCGGAGCCAGTCTTCGTGATTTCGAACGGCCGTCACACGATGACGGCCGTCCGAGTGG # Questionable array : NO Score: 2.87 # Score Detail : 1:0, 2:0, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.71, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTTCAATGGAGCCGCGCTGATTTAGCGCGGAGAAC # Alternate repeat : GCTTCAATGGAGCCGCGCTGGTTTAGCGCGGAGAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [7,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-12.10,-13.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-16] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [35.0-35.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,0.74 Confidence: LOW] # Array family : NA //