Array 1 582530-582362 **** Predicted by CRISPRDetect 2.4 *** >NZ_KQ960133.1 Olsenella sp. DNF00959 Scaffold91, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 582529 36 88.9 30 NNNN................................ CTATCCTCTGGCATACTTTCCTCGACGTTC 582463 36 100.0 30 .................................... TTAAGGTGCGTCCCACGGCATCGCGAACGA 582397 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 3 36 96.3 30 GTTGGATTACCAGTCAGAACGACACTGCTCCAAAAC # Left flank : CGACACTGCTCCAAAACACCTCGAGCGCGTCGGAGTTCACCCACTTCGTTGGATTACCAGTCAGAACGACACTGCTCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGATTACCAGTCAGAACGACACTGCTCCAAAACACGACGGGGGTTGCGAGATAGTCACTCAACGTTGGATTACCAGTCAGAACGACACTGCTCCAAAACCTTTCATTGCACCACCACCATAATGCAAATGTTGGATTACCAGTCAGAACGACACTGCTCCAAAACAGTGTCCCGCGCCAAAGGCGTATCTCTATCGTTGGATTACCAGTCAGAACGACACTGCTCCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Right flank : CATTGAAGCAAAATTCTCCTGCAAAGAACGGCCAATCTGACTGTCGCTTGTCACTCAGCGCTCAACAAAGTCCATGTCAATGAGCCTTTTTTGCTCATGTTTGAATGCTGCCGGACTCACATTTTGTTCCAGAAGAAGCACGGGGACATTCGTAAAAAAGACATGCTCAAGGAATGCTTCCAGTCCTTTTTCTGTCAGAAAAGTTCTGAGATTCACGAACGTAATACACTGAGTGACACCCGCATCAAGTACAAATGAAAGGAAATCCATACAGTTTTCAAGGACCGACCGTTGGGGTTCGTGCCCAACCCCAAACCCAAACGTTCTGACGAACCGTTGCATGTCCCATTCTATTTCAAATCCGTACTCGGCATGCATTGTCATCGCCAATGACATGTATGCCGAAACAATGTTGGCAGCCGATTTGTCTATGAAGGCTCGCAGTTCCTCATCCTCAAGCAACGCCATCTGAAACTTCCGCGTCACCGCTCCAAGCAGGT # Questionable array : NO Score: 5.48 # Score Detail : 1:0, 2:3, 3:0, 4:0.81, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGGATTACCAGTCAGAACGACACTGCTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:52.78%AT] # Reference repeat match prediction: R [matched GTTGGATTACCAGTCAGAACGACACTGCTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.70,-1.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [51.7-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [1.05,4.5 Confidence: MEDIUM] # Array family : I-C [Matched known repeat from this family], // Array 2 583763-583270 **** Predicted by CRISPRDetect 2.4 *** >NZ_KQ960133.1 Olsenella sp. DNF00959 Scaffold91, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 583762 31 86.1 30 -----............................... CACTCAAGTACGTCCTCGTCGTAGCCAAGG 583701 36 100.0 30 .................................... GTGGAGCACGGTGTTCTCGTACACGCGGCG 583635 36 100.0 30 .................................... CGAGGGTTACGTTGCGTCCGCGCTCCGACA 583569 36 100.0 30 .................................... TGTCTTCAAGCACAAGGAGAATGGCGTGAG 583503 36 100.0 30 .................................... AAGAGCGTTGGTTGAAGCAGGCCGACCTAT 583437 36 100.0 30 .................................... GGGCACCGTGGGCGAGGCAATCACCAAGGA 583371 36 100.0 30 .................................... GGCGCGGTTGCCGTAGCAGCGGTTGCCGCT 583305 36 86.1 0 ...............................NNNNN | ========== ====== ====== ====== ==================================== ============================== ================== 8 36 96.5 30 GTTGGATTACCAGTCAGAACGACACTGCTCCAAAAC # Left flank : | # Right flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTACCAGTCAGAACGACACTGCTCCAAAACGAGCCGAGGGCGGAGCGGTGGCGTGCGGATGTTGGATTACCAGTCAGAACGACACTGCTCCAAAACGAAGAGGCTCATGCCGAAGACGCCCGTGTTGTTGGATTACCAGTCAGAACGACACTGCTCCAAAACACCTCGAGCGCGTCGGAGTTCACCCACTTCGTTGGATTACCAGTCAGAACGACACTGCTCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGATTACCAGTCAGAACGACACTGCTCCAAAACACGACGGGGGTTGCGAGATAGTCACTCAACGTTGGATTACCAGTCAGAAC # Questionable array : NO Score: 6.08 # Score Detail : 1:0, 2:3, 3:0, 4:0.82, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGGATTACCAGTCAGAACGACACTGCTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:52.78%AT] # Reference repeat match prediction: R [matched GTTGGATTACCAGTCAGAACGACACTGCTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.70,-1.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.91 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 798-564 **** Predicted by CRISPRDetect 2.4 *** >NZ_KQ960130.1 Olsenella sp. DNF00959 Scaffold64, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 797 36 80.6 30 NNNNNNN............................. CACTCGAGGGTATCCTCGCCGTATCCCAGC 731 36 100.0 30 .................................... GCACACCACGTCTGCGGGCTGGATGGCCGA 665 36 100.0 30 .................................... CCGGATTTGCTGGGGGACAAGTGGCGGGCT 599 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 4 36 95.2 30 GTTGGATTACCAGTCAGAACGACACTGCTCCAAAAC # Left flank : GGATTACCAGTCAGAACGACACTGCTCCAAAACATCTTCGAGAGGATGGAGAACGGCGGGTTGGTTGGATTACCAGTCAGAACGACACTGCTCCAAAACTGGCGCATGGTGCTGTTGGCCATCCTGCGCGTTGGATTACCAGTCAGAACGACACTGCTCCAAAACGAGGACGGCCGAGATCAGGGCCGAGTACGGGTTGGATTACCAGTCAGAACGACACTGCTCCAAAACCGTGCCGTCGCTGGGCCACTGCACGCGGTCGTTGGATTACCAGTCAGAACGACACTGCTCCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Right flank : CCATGGCGACGATGGCTTCCACGGCCTCGTCGCTCGGGTAGCCCCTGCTGCGGAGTAGCTCCTTGCGCCCGTCCGTCACCGTGACGGTGGGCAGGTAGTCGATATGCTCGTACCTCGCCGCGCACGGGCGGTCCTCTATGTCGACGACCTCCGGCTCGACGCCGGCGTCCCTCAGCTTCGGCACGAGGTCCGCGAGCGTCGCCCTGCACGGGGCGCACCACTTGGCGTGCCATATGGTCACAGCGGGCATGGTCTCCTCCGCTCTCGCCGCACCACAGAATCTGGTATACTCATTTGTGAAGGGGTACACCCGCCCAGCTAATTGGGAGGGCAAGGCCCCTTTTCTATTGGCGGGCGAGGAAGATAGAGCTGGTCCCGTCCCTGGATACGTAGATCACGTTCACGGCATATTTCCTCATCCTGCGCCTTATCTCGTCAACAATGTCCCGCTCGTCACGCGTCGCGCCATACGACGTGATTACTATCCGAGCTTCGGAGTC # Questionable array : NO Score: 5.62 # Score Detail : 1:0, 2:3, 3:0, 4:0.76, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGGATTACCAGTCAGAACGACACTGCTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.72%AT] # Reference repeat match prediction: R [matched GTTGGATTACCAGTCAGAACGACACTGCTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.70,-1.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [31.7-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,4.5 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 1184-953 **** Predicted by CRISPRDetect 2.4 *** >NZ_KQ960130.1 Olsenella sp. DNF00959 Scaffold64, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 1183 33 91.7 30 ---................................. ATCTTCGAGAGGATGGAGAACGGCGGGTTG 1120 36 100.0 30 .................................... TGGCGCATGGTGCTGTTGGCCATCCTGCGC 1054 36 100.0 30 .................................... GAGGACGGCCGAGATCAGGGCCGAGTACGG 988 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 4 36 97.9 30 GTTGGATTACCAGTCAGAACGACACTGCTCCAAAAC # Left flank : | # Right flank : CGTGCCGTCGCTGGGCCACTGCACGCGGTCGTTGGATTACCAGTCAGAACGACACTGCTCCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTACCAGTCAGAACGACACTGCTCCAAAACCACTCGAGGGTATCCTCGCCGTATCCCAGCGTTGGATTACCAGTCAGAACGACACTGCTCCAAAACGCACACCACGTCTGCGGGCTGGATGGCCGAGTTGGATTACCAGTCAGAACGACACTGCTCCAAAACCCGGATTTGCTGGGGGACAAGTGGCGGGCTGTTGGATTACCAGTCAGAACGACACTGCTCCAAAACCCATGGCGACGATGGCTTCCACGGCCTCGTCGCTCGGGTAGCCCCTGCTGCGGAGTAGCTCCTTGCGCCCGTCCGTCACCGTGACGGTGGGCAGGTAGTCGATATGCTCGT # Questionable array : NO Score: 5.76 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGGATTACCAGTCAGAACGACACTGCTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:52.78%AT] # Reference repeat match prediction: R [matched GTTGGATTACCAGTCAGAACGACACTGCTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.70,-1.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [36.7-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [1.05,4.5 Confidence: MEDIUM] # Array family : I-C [Matched known repeat from this family], // Array 1 165-1 **** Predicted by CRISPRDetect 2.4 *** >NZ_KQ960127.1 Olsenella sp. DNF00959 Scaffold32, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 164 36 100.0 29 .................................... GTGACGGCGGCTGCGAGATAGTCACCCAG 99 36 100.0 30 .................................... GAGCGCATAGACCGGGCGTCGACCAAGCAG 33 33 91.7 0 .................................--- | ========== ====== ====== ====== ==================================== ============================== ================== 3 36 97.2 30 GTTGGATTACCAGTCAGAACGACACTGCTCCAAAAC # Left flank : CTACTCCGTCACGGTCTGGGACGACGAGCTGCATGAGCCGAACCCAGACGGGAAAGGGACCGTTACCATTGGACGTTCCGACCTTGCGTCAGGCGTCGAGATAAAGACGCTAGATGGGGCAAGTTCCTACTCGACCGTCGACGGGCACATGAGAAACGCAAGAGGAAAGAAGGGTGTTTCCCTCGTCGTTCTCGACTTCAGCCAAAACAAGGCACTTGATGACGAGCAAGCCGTGTCATTCACGTGGAAGGCGATGAAGAACCGTCGCATCAGCGAAGTGGCCGTGATCGACCACGCAGGAGTGATAAGCAGACTTCATCTAGAAAAATAATGACGGGTCCCTGCTCCACAGCTGGTGCATAGACCCGTCTGACGGACTTGTACCCAATCTCACACGAAAAAGGCCACCGACGGGTGGCCTTTTTCATACGCCGCCACCGGCGCACGGTGGCTACACGACCGCCAGAGGCGGGGGAACGGACGACCGCGAAAGCGCGGGG # Right flank : A # Questionable array : NO Score: 5.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGGATTACCAGTCAGAACGACACTGCTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [7,10] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTGGATTACCAGTCAGAACGACACTGCTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-2.90,-1.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.87 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 1048-814 **** Predicted by CRISPRDetect 2.4 *** >NZ_KQ960127.1 Olsenella sp. DNF00959 Scaffold32, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 1047 36 88.9 30 NNNN................................ ACATGCGCTCGTTTTCGTGTGGCGTGCTCT 981 36 100.0 30 .................................... ATCTCGGTGCCCGTCTCCTCCCAGCCCACC 915 36 100.0 30 .................................... AAGAGCGTTGGTTGAAGCAGGCCGACCTAT 849 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 4 36 97.2 30 GTTGGATTACCAGTCAGAACGACACTGCTCCAAAAC # Left flank : CCATGCCGAGCACCCAGGGCGCGAAGCCGTGGCGGCAGTTGACGCCCCCGTTGGATTACCAGTCAGAACGACACTGCTCCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGATTACCAGTCAGAACGACACTGCTCCAAAACGCCGTCGCCGCGAAGACGCGCCCCATGGGCGTTGGATTACCAGTCAGAACGACACTGCTCCAAAACTAGGCCCCGGACAATCCCGGACAATCCCGGGTTGGATTACCAGTCAGAACGACACTGCTCCAAAACCCCGTCGCATGCGTCGTGCGCCGCATACGGGTTGGATTACCAGTCAGAACGACACTGCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Right flank : GCGGAGGCCAAGCTTCGCGACCGCGAGTGACTGAGGACGGGCAAGGTACCGCCCGTCGGGTACGACTCGGACGCGACCAGGGCGAAGAAGTCCAAGGACAAGGCACATGCCAAGGAGTTCAGGACCGCCACGAAGCTCGCGGCCCATGGCTACTCCGTCACGGTCTGGGACGACGAGCTGCATGAGCCGAACCCAGACGGGAAAGGGACCGTTACCATTGGACGTTCCGACCTTGCGTCAGGCGTCGAGATAAAGACGCTAGATGGGGCAAGTTCCTACTCGACCGTCGACGGGCACATGAGAAACGCAAGAGGAAAGAAGGGTGTTTCCCTCGTCGTTCTCGACTTCAGCCAAAACAAGGCACTTGATGACGAGCAAGCCGTGTCATTCACGTGGAAGGCGATGAAGAACCGTCGCATCAGCGAAGTGGCCGTGATCGACCACGCAGGAGTGATAAGCAGACTTCATCTAGAAAAATAATGACGGGTCCCTGCTCCACA # Questionable array : NO Score: 5.72 # Score Detail : 1:0, 2:3, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGGATTACCAGTCAGAACGACACTGCTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: R [matched GTTGGATTACCAGTCAGAACGACACTGCTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.70,-1.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [28.3-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,4.5 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //