Array 1 155836-157028 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP033897.1 Corynebacterium gerontici strain W8 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================= ================== 155836 36 100.0 34 .................................... CCCAGAACCGTGCGCTGCTGCTGCCCCCTCCTGA 155906 36 100.0 37 .................................... CTATATCGGTAATGGTAATGTTATTCACGCGCCGCAG 155979 36 100.0 37 .................................... AGGTCGGGGTGCTTGGCCTTGAATTTCTTCGCGTCGA 156052 36 100.0 35 .................................... GGATTACCAAAATGTGGAGCCGGATTTTTACGCGC 156123 36 100.0 38 .................................... ATCCGCAAAAATGGCGCGTCAAGCAACACGCCCCAGAT 156197 36 100.0 35 .................................... TTCAGCGACTCCGGCACCGCATTATTGGCATACAT 156268 36 100.0 35 .................................... CAGTGGTTGTGGGGCGGGTTGCTCGCCGTGGCAGA 156339 36 100.0 37 .................................... ACGTGATTGCGTGACACCTGTGCAGCATCAGCAAGAC 156412 36 100.0 36 .................................... ACGCACCGATAAAACAGGCCGTGGCCTATCCATTGA 156484 36 97.2 35 ...A................................ CCAAGGATGTGGCCGTCGCCCTCGGGTATAAGAAC 156555 36 100.0 34 .................................... TCATCATCACTGGTTGCCCGTTCATCACGACGTA 156625 36 100.0 36 .................................... GCCGTCTGCGAGCACACGCAGTTTTCGCAGGGTGAT 156697 36 100.0 38 .................................... CTGCATTCAAGGATGAAGAGCTGGCATGACATGGCTGA 156771 36 100.0 39 .................................... CTCCGCGCCCTGATGCACCAACTACCCCACATTGCCGGG 156846 36 97.2 37 ................T................... TAGTCAATCATCGTCGGATCTTGATGGCCTGTCATCG 156919 36 100.0 38 .................................... ATGCGTATTTGGGATGGGCGCACCGGAATCGGCACCGG 156993 36 88.9 0 .........................C....G.C..T | ========== ====== ====== ====== ==================================== ======================================= ================== 17 36 99.0 36 ATCGCTGCAGCTTCGGCTGCAGTCCTACATTGAGGC # Left flank : GAGCGGTGAGAACGCGATGAGCCGTGATGATGCCCGGAGAACGCTCGTCGCCTACGACATCCCGGATGATCGCAGGCGCACCCGACTATCCACCAAGCTGGCAAAATACGGAGATCGGTTGCAGTACTCGGTATTTGTGGTTGATGCGTCGCCCGCTAAGTTGCTCCGGATGAAGTCGGAGATCGAAGAAGTCCTGGATCTTCAGAAAGACTCGGTGTTGTTCTGTGACTTGGGGCGTCTTGCCGAACTGAGCGAAGCTCGTTTTAGCTTTTTAGGTCAGGGGCGGGAGGTTACATCCGACGAGGTGTTTGTCTTCTAATGCCCACCCGCGAGGCACCCAGATCTTCGGTATCTCCGAATGTCGCTCGCGGTGAAAATGCCTGGTGAGTATAGTATCTCGTGCACTAATCGGAGATCGGGACAGGGGATGGTTGCCTTTTGCGTTCTCGCTCGCAATTGCATTGAAATAGGCCATTCAACCAGCTGTTATGATGGTAGCC # Right flank : TTCGTCAAGTGATGCGTGGATAGGATGAATGCGCCCACGGCTTTTCGACGATCACTACCGAGGTCAAACGCCTCGCCGACACCCCGGCTGGCAGGTACTTCCTCGCCGAAGACGAGCACCAGCAGTATCTGCACAAGAATCCGGGTGGCTACTGCCCGCATCACTCAACGGGCGTGGCGTGCGGCGCGGATGGTGTGTAGCGGCTTGGCAAATATGACGCTGAGCACGAGCAACCAAGCAATGCCCAGCAGCCAGCCGGCGAGCACATCGCTGAACCAGTGGTGGCCGAGCCAAATGCGTGAGGCGCCCATCAGCACAATGTAGATGCCGGCTGCGATATAGGCGCGGCGGCTGGCGTAGAGCATGGCGATGATGCCGAAGACCACCACGGCATTCAGTGTGTGACCGGAGGGGAAGCTCGGGGCGTATTCGAAGGGGGCTACGGCAAAGACATGCTCGGGGCGGGGACGTCCTAGCCACTCTTTCACCAGTGTGGTGGT # Questionable array : NO Score: 3.21 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATCGCTGCAGCTTCGGCTGCAGTCCTACATTGAGGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-9.70,-8.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [51.7-46.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.37 Confidence: MEDIUM] # Array family : NA // Array 2 1726161-1724241 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP033897.1 Corynebacterium gerontici strain W8 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 1726160 28 100.0 33 ............................ CTGATAAGCCGAATGGCACCAAGTGCTCCGTTG 1726099 28 100.0 33 ............................ CAGACAGCACCGGGTTGAACGCGCTTGGCAGCG 1726038 28 100.0 33 ............................ CATCGGGCCCCGGAGACCGCGCCCACGGAGAAC 1725977 28 100.0 33 ............................ CGGCGCGAGCCCGCGCTGGTGCGCTTGTGGGAA 1725916 28 100.0 33 ............................ GTAGGAGGCGATGACTGGAACTGGCCAGCCTCA 1725855 28 100.0 33 ............................ CGTCACAATGCCACCACTCGACAACCCCACCAG 1725794 28 100.0 33 ............................ CCCTGCCAAATGGTGTGAACGTCGAAATGGGCG 1725733 28 100.0 33 ............................ CAGGGCTGCGTAGCGTTGCCATTGACGACAATC 1725672 28 100.0 33 ............................ CCCGGCGCCAAGCTGATCCCACTTCGACTTGAC 1725611 28 100.0 33 ............................ GTCGCTGGCAAGTATTACAGCAACCAGAAAAGC 1725550 28 100.0 33 ............................ CCCGCATCGTCCGTCGCCTAGTCACAGAACCGG 1725489 28 96.4 33 .....T...................... GTTGGCGACGTCGATGACTTCGTAGTGGATGCC 1725428 28 100.0 33 ............................ CATGATTGCACACAACCAACTACCGTAGCCCAG 1725367 28 100.0 33 ............................ CACGAGCCCTATAGGTGGTCGACAGCGGGGCAT 1725306 28 100.0 33 ............................ GCATAATGACACTGGCTCTGGGGAGTTGGTGTT 1725245 28 100.0 33 ............................ CATCATCGGGGTTGTCGTGAACACGCTGATCGT 1725184 28 100.0 33 ............................ CGGCCTGTGGGAGGGCATGAAGTCCGCGTGGTC 1725123 28 100.0 33 ............................ CGTTCCAATGTTCACGCTGCTATCTATGCCTGC 1725062 28 100.0 33 ............................ CTTTTGCTAGTAGTGGTTGGAATTGATGAGGTC 1725001 28 100.0 33 ............................ CAGGAAATACCCCCGTCGGTGATCCGAACGGGG 1724940 28 100.0 33 ............................ CAAAGGCTCACTTCACCCGGCGCGCCCAGTCCT 1724879 28 100.0 33 ............................ CCCACCAATAGCGATGTTGTCCTGGTCTTTCGT C [1724874] 1724817 28 100.0 33 ............................ CGGTTGAGCTGAATGATCCGTTGGCTGCTGCGA 1724756 28 100.0 33 ............................ GTATGCAGCGAAGCCTCGACCCCGGAGGATCTG 1724695 28 100.0 33 ............................ CCAATTTTACCGCTCTAGCGAGACGCACGCAGA 1724634 28 100.0 33 ............................ CCAATTTTACCGCTCTAGCGAGACGCACGCAGA 1724573 28 100.0 33 ............................ CGGTGCTTCGGTTCATTCCGAGACGATCAGCCA 1724512 28 100.0 34 ............................ CAGATGGGGGCACCCGATCGGAGGTCGATGATTA 1724450 28 100.0 33 ............................ CCCGCATTGACGCTTTGCAAACCAGGGTGGATG 1724389 28 100.0 33 ............................ CGCGCAAACGATCATGCTATCGACGGCCGGCAC 1724328 28 96.4 33 ..............C............. CCACGGCGTGACTAGCCGCGGAACCTACCTCGA 1724267 27 89.3 0 ............T.......-..C.... | ========== ====== ====== ====== ============================ ================================== ================== 32 28 99.4 33 GTGTTCCCCGCGAAGGCGGGGATGAGCC # Left flank : CCGGATTGCGCGGCGACCTTGGGAAGTGGCTGACCGAGATTTCGCCAGGGGTTTTCGTCGGGAATCCCTCCGCGCGGATCCGCGACTTGCTATGGCAACGCACCACCGAACTATGCAAGGACGGGCGTGCGCTGCTCATTTTTTCATCGAACAATGAGCAAGGAATGGAATTTCGAACCCACCGCCATGACTGGGAACCGGTCGACTTTGACGGGATAACACTGATGACGCGGCCCGATAAAAGCTCCAAGCATGAAAAGAATCCGCGAAGAACAGGCTGGTCCACAGCACGTAACCTACGAAGAAAACAGCGACGGTGAGGAACGGCCATTGGATGATGGGCAGTATGGGAACCGAGCCCGATTCCCCCCTTGCAAGTGTTACCGAAGAGCTTAGTAAAAAGCCAGTAGACCGCACTAGAGTCCATTGGAGGCGTGATTAGTGAAACCAAGCTGTATGTAAAATGGACCTGGCTCAACCTAACGTGCTGGTAGTGAAGT # Right flank : TCTTGTAGTGGTGGTACGTATGCGTGATGATGTTTGCTCCGCGCGGACGCGGGCGATACAACTGGAACAAGAGTGGGCATTGCCTTCAGCTCGCCCTTAGTGCAGCGACGGGACAAATTTGAGCTCAGCTGTCAATTGAAAATGTTGAAGTCACTAAATTTGCACCGCGCAACGCAAAACGCCACGCCGATGAGGGCGTGGCGTCGAAAAGCTAAGAAGGCTTAGGCCATCTTGTGCAGGGCGCGAGCCATGTTGGACTTCTTGTTGGCTGCGTTGTTGCGGTGCAGCACGCCCTTGGACACAGACTTGTCCAGCTTGCGGGAAGCGACGCGGAGCTGGGTCTCGGCAGCGGCCTTGTCGCCGGCCTCAACGAGCTCGTTGAACTTGCGGATCTCGGTGCGAACAGCGGAACGCACGGACTTGTTGCGCATGCGAGCCTTCTCGTTGGTAAGGATGCGCTTCTTCTTGGACTTGATGTTTGCCATTGGAGTACCTCTTGG # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGAAGGCGGGGATGAGCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [4,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGAATGCGGGGATGAGCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-11.70,-13.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [10-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [43.3-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //