Array 1 37526-41387 **** Predicted by CRISPRDetect 2.4 *** >NZ_LIWG01000006.1 Campylobacter sp. RM9337 contig00006, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ========================================= ================== 37526 30 100.0 36 .............................. GCTCTGGTACTCCGCAGCTGGCAGAGCCAACGATGG 37592 30 100.0 36 .............................. AGAGTGAAATTTTATTGTCAAATGCGATTTTCTCGA 37658 30 100.0 35 .............................. ACCTAAACCCCAGCCCATACAGCGGAGCTATCTCT 37723 30 100.0 34 .............................. TATTTTGATAAACGCTTTTATACTTCCTTGTTGA 37787 30 100.0 37 .............................. GAAGCGGTAGAGGGCGACTTTGAAAGCAAGGCGCAAC 37854 30 100.0 35 .............................. TGTCTTTTTTGACTTTTCACATGAACTGGGGGATA 37919 30 100.0 40 .............................. AAGTCAGATACAATATCAGGAGCTATTTTGAATTCTCGGC 37989 30 100.0 35 .............................. CCTCATTTTCTTGACCCAGCTTTGTGGGAGCAATA 38054 30 100.0 37 .............................. AAATTTCAAGTCCCTTGTGCGTCAAAACCGCACTCAC 38121 30 100.0 35 .............................. TCGCTAAACTTGATCTCACAAAAGGCGTCGGCTAT 38186 30 100.0 35 .............................. TTGTTTTTTCAACACTAAAAGAAATCTGCAAATCT 38251 30 100.0 34 .............................. CTCTCATCCACAAAATAAATTTCAGGGCTGATCG 38315 30 100.0 34 .............................. GTAAAAACGCTAAGAATAATCTGAGTTTGCACCG 38379 30 100.0 38 .............................. TTTCGGTAACGGCTATTGAAAACGGCGAAATACCGCAA 38447 30 100.0 41 .............................. TTTAAGCGAAGTTGAAAAAGCGATCCGCAAAAACTATTTAG 38518 30 100.0 34 .............................. CTTTATGAGATACAGCGCAGTGGAGAGCCTTTGG 38582 30 100.0 36 .............................. AAGATACGCTAAACGGCGATGAGCTAAGCGGCATAA 38648 30 100.0 35 .............................. TTGCGTCCAGTTCTTCTTTCGAGCCTGCATTAGCG 38713 30 100.0 38 .............................. TAAGATCGGGATTAATTTGCTTTTCGGCGCAAATCGAT 38781 30 100.0 36 .............................. CTCAAGTATTACAGTGAGAGTTGGGTTAAGCATCTG 38847 30 100.0 38 .............................. TGCATCTAAGGCAAACACAACTGCACATGGTGGTAACT 38915 30 100.0 35 .............................. GGTGTTCTTCGTAAATAGCAAAGCGTTTTTCCATA 38980 30 100.0 39 .............................. TGGAGCTTAAAAAATGCGTTGCGCCGCATTTTGGAGTAG 39049 30 100.0 39 .............................. GGAACATAAATGATCGCACAAACTTCAAGAGAGGCATAC 39118 30 100.0 37 .............................. TCCGGTTTGTCAAATATGTAACCGCAAGTGGAGCGTG 39185 30 100.0 34 .............................. TTATGCTGTTTGATTTGAGATTTGTAGCCGTTTA 39249 30 100.0 37 .............................. TTTTGTGGATGAGAACAATAAAAGGGTGAGCGAGAAC 39316 30 100.0 36 .............................. TCGGCGGTAATGCTATGTTTTTCTTACCCAGTGATG 39382 30 100.0 37 .............................. TATTTTATTTTTTTTCGTTTGCAGCCGCGACCCAGTC 39449 30 100.0 35 .............................. GCTTAGCGGTTCGCCGTTTTTCTCTCGCGGATAGT 39514 30 100.0 37 .............................. ATGAAAACCACCTAAAATCAAAACCTACGGCAATAAG 39581 30 100.0 37 .............................. TTACCCCTAGCATTCGCACTAGGCGATCGGGCTCTGT 39648 30 100.0 36 .............................. TACCATCAATGACGAATACGACATCGGACTTGAAAG 39714 30 100.0 36 .............................. TTTGATTTTGTAATGAGGCGGAGCAAACCGCCTAGA 39780 30 100.0 36 .............................. TTCGTGCAGAGCGTGGCACTTCATCAAATATAAGGA 39846 30 100.0 36 .............................. TAGAAAATTCCAGCAAAGAGAGAGAATTGGTAGTAG 39912 30 100.0 36 .............................. AAAGCCATGTGTAAACCTCGTATTCGTTTTCGCTGC 39978 30 100.0 35 .............................. GACCCTATCTTGTGGGACCAATACCTAGCCTACAA 40043 30 100.0 35 .............................. GCTCGTTTATCTCGCGCTCAATGGCTTTGCTTTGC 40108 30 100.0 35 .............................. AATAGTGGCGGTGAGCATACAACTCGTATATCACA 40173 30 100.0 36 .............................. TACAAATAAACCCGATGAAAACGCAGTGCCGCCACG 40239 30 96.7 36 .........................T.... GAAATGTTAGGCGATCCACAAAATCAAAACGGCAAT 40305 30 100.0 36 .............................. TCACGCCTAGATCAAGCCCTGCTAGCTGCTCGCCGA 40371 30 100.0 36 .............................. AAATATGGTTGCCGCAAAAATGGGAAGAGCTAAAAA 40437 30 100.0 36 .............................. TGTTTCAATAAGAACATCTGCGCTAACCGGTAGTTG 40503 30 100.0 37 .............................. GTTTAGAAATTCATCGCTTACGTCATCGTCGTAGGCG 40570 30 100.0 35 .............................. GCTAAATACGGATCAAGCATTTGCGCGATATACGC 40635 30 100.0 36 .............................. ACTCACTCGCTTCAAGATGTCCCAAATCCTCAAAGT 40701 30 100.0 36 .............................. GAGCTCCAACCCATACTCCCCAGCCTTTGGCTTCGC 40767 30 100.0 36 .............................. CGTCCAATAGTTTGCACCAGTAGCAAAACCGAATAA 40833 30 100.0 35 .............................. AATCATTTGGTGAAAAATATGTTTTAGATGATTTG 40898 30 100.0 36 .............................. GAAATGTTAGGCGATCCACAAAATCAAAACGGCAAT 40964 30 100.0 34 .............................. TCCTATGCTTTCAAGGGATATTCGCCTTGACGGA 41028 30 100.0 34 .............................. GCTACGACACAAGTAGCTCAACACTTAAAATTTC 41092 30 100.0 36 .............................. TATTCGCCAACCATTGTTTCTTCAGATATGCTTTTT 41158 30 100.0 37 .............................. TCGCGCGGCGTTGTGAAAAACAGGACAAAAACCGAGG 41225 30 100.0 36 .............................. GTTGGCATACCTGGAACTGGTAAAACATTTTTCCCT 41291 30 96.7 37 .............................T TGCAATGGTGGGCGGATTGGTTGGATAGCCTACTAGG 41358 30 86.7 0 ...............A....T.......TT | ========== ====== ====== ====== ============================== ========================================= ================== 59 30 99.7 36 GTTAAAATTTAAGCCGTTGGCTTTTGAAAC # Left flank : TGAGATTTATAAGACCGAGCTAGATCCAAGGATCGGCTTTTTACACGAGCCAAACTACCGTGCGCTTAGCTTGCATCTTGATATTGCTGAGATTTTTAAGCCGATTTTGGGCGATACGCTGATCTTTACAATGCTAAATCGTCGTGAGATCACGGCAAAGGACTTTGAGACGAACGCCGGACGGATCAAATTTAGCAACGAAGCCGTGCAAAAGATCGAGATAAAGATAATCGGCAAGCTCACCGAGCAAGTAGAAATAGCGGGGCAAAAGCTCACGTGGAGGCAGGTGATCCGCCGAGAAGCCAATAGGCTTAAAAAGTGTATTTGTGAGGACGCGCCTTATGAGGGGTTTGTATGGAGATAAAGCTTGTTTTAAGCTTTATGATGACCCGATATTTTGGGCACTTGGCTGTTTGATGTGAGTAAAATTTAGCCTTTTATAAGGTAAATAGATATAGACTTTATCTTGCAAACAGCCCTAAAATGTGTGTTTTGGTGCT # Right flank : TGAAATGAATGAAGACAGGCAAGGCTGGAATTTATTTTAAACGTAAAGGAGAAAGAAAATGCAAGATGTAAAACAACTCAAAGTTATGCTTGATAGATACGAAGCCTTAATTTGCCTTATTGTGTAAGATGAGCATAAAAAAGTTATTAATAGTTAGTTGTGCCCGCTCTTTTGTATCTTAATAAAGTTGCATGACTGTTATGGTGGCTCTAGTGGGTGATAATGTGGCATAAAGACAAAGAATGACAAATAAATCCCGGAGAGCTGTAGCTAAAACATGAGCTGCACACAAAAACGCATGACAGTTGAGACAATTACTTAAATGCTTATCTTTTAAGTTATGGTAATTTAACCAAAATGTTAGCTAAATATATAAAATGGTGTGTTTTTTGTTGCAAGGAAGTAATTATAGTATTATGCTGTTTGTTGTATTGAAGTAAGTGGCCGGGAGATAGGAACATCGAAACACTATAAAATCGGTATTCCAAGCCATTTTGAAC # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTAAAATTTAAGCCGTTGGCTTTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-4.30,-3.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA //