Array 1 69482-70486 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_MKYN01000008.1 Corynebacterium diphtheriae strain c21 contig000008, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence              	Spacer_Sequence                 	Insertion/Deletion
==========	======	======	======	=============================	================================	==================
     69482	    29	  96.6	    32	............................T	GAGGTCTGCTAGGTCATTGTCGGTGTACCCAG	
     69543	    29	  96.6	    32	............................G	CCGCGCATAGGTATCCGTCTCCTCGGCACGAT	
     69604	    29	  96.6	    32	............................T	CGTTGACCGTGCTACCGACATGGCTTCGCCCA	
     69665	    29	  96.6	    32	............................G	CATGGAAAGCCGTTATTGCTGACCATAACGAA	
     69726	    29	 100.0	    32	.............................	ATCTGGTACGGCAGTGTCTCCTCGGGTAAAAC	
     69787	    29	 100.0	    32	.............................	CACCAACAAAACGGGAGACAAACACATGGGAA	
     69848	    29	 100.0	    32	.............................	CACCAACAAAACGGGAGACAAACACATGGGAA	
     69909	    29	 100.0	    32	.............................	TCCTGCCCCGAGGTGACGTTCACATCCAGCTT	
     69970	    29	  96.6	    32	............................G	CCGCGCATAGGTATCCGTCTCGTCGGCACGAT	
     70031	    29	 100.0	    32	.............................	TCCTCGAGGCTGATCTCACTGTCCGTGACGGC	
     70092	    29	 100.0	    32	.............................	ATGCCACAACACAAAGACCCAAGGCGAGGCAG	
     70153	    29	  96.6	    32	............................G	CTGTGTGGCGTTGCCACGGTGATGTGTAGGTT	
     70214	    29	 100.0	    32	.............................	CTCTCTTTTTATCCTTTTGAGGTCCTCTATCG	
     70275	    29	  96.6	    32	............................G	AAAACCAATACTCCTACAGCTGGAACGACCAA	
     70336	    29	  93.1	    32	.............T..............G	TTGTTAACGGATCCACGAGACACACCCAGTAT	
     70397	    29	  93.1	    32	.............T..............G	TCATAATCAGCACTGTCAATCCTCATGTATTG	
     70458	    29	  96.6	     0	.............T...............	|                               	
==========	======	======	======	=============================	================================	==================
        17	    29	  97.6	    32	GTTTTCCCCGCACCAGCGGGGATGAGCCC	                                	       

# Left flank :   CTTACTTGGAAAGAAGCTGAGGCATTGGCTGGAAACACAGTGCGTCTGCCAGCCCAAATGACACGTAGAGATTCGGATTTTAATGCCGTTATTGATTCGCTCGAAGCACAAACACCACCAGAATGGCAACGATCCGGTTTGCTTAAAGGCCAAGTTGCGTTGTTTTTCGACGAAAGAGGAGAGGCTCGTTTAGGTCGATTCCTAGTGCGTTATACCAATGAACGTGGATTAGAGGTGGAGGTCTGCCCAAAGGAAGACGCATAAAAGGAAACCCCGCTGGTGCGGGGAAGTATGCCTATGTAAATCTTGTAAAGATATTAAAAAGGCTCATCCCTGATCGCAGGGAACAATGCCAGCCTATGGCTAGAAGAAAAGACTAAGCAAATTTGGGTGAATAGCTGATCCTAAAACAGTAGAAATAAAGATGAAGCAGAAAAATTGCTGAAACAAAGTTATATGTAATAAGCTCTAACTGTCTCTAAACATGCAGCTTGATAAGA
# Right flank :  CAGGGACTTTGAGAACTGGACCGCCGTGATTCCCTGCACTAGCAGGGTGGATGAATCTTTGTTGAAGAACGGGTTTTGGAATCTGTGTTTTTCATTCAGAGAAATCAGTAAATGATGGCTCTACTAAAAAATTTTGAAAAAACTAACTTTTAATATCTATAGAGTGTATTCTGTGGAAAAGTGCTTCCTAAGTTGGGAGTTTTAAAACAATCAGGAAGGAGTTGGTGATGGCTTCGTTACTGGAGATCCGCTGGATTCTGGCTCTTGATACTCAAGGTAACCAGATTTCAGTTGGAATACGAGATATTTTCGCGGGGGAGGTGCAGGTTGCCTATATTCAGGGGGAGTCCCCGGCTCAAGACTATGCTGTGATGCGGCTTTTGCTGGCTATTTTCTGGCGTGCCCATTCCATGGATATCGACATGGACGTGGAACCTTTTGATTTTCTTGAATGGTTCAACAAGATGAGACGTCGTCTTGCTCGAAAAGGGAAAGATCAG

# Questionable array : NO	 Score: 5.78
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.64,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTCCCCGCACCAGCGGGGATGAGCCC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     R [4,5] Score: 0.37/0.37
# 	Reference repeat match prediction:         F [matched GTGCTCCCCGCGCCAGCGGGGATGAGCCG with 96% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  NA [-12.70,-12.70] Score: 0/0.37
# 	Array degeneracy analysis prediction:      NA [0-0] Score: 0/0.41
# 	AT richness analysis in flanks prediction: F [66.7-46.7]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [4.77,0.37   Confidence: HIGH] 

# Array family : I-E [Matched known repeat from this family],   
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