Array 1 2143-1884 **** Predicted by CRISPRDetect 2.4 *** >NZ_KI911399.1 Salinispora mooreana strain CNT-150 B174DRAFT_scaffold_45.46, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ====================================== ======================================= ================== 2142 38 97.4 39 ..........A........................... ATCGCGGCGTGCGCCAAGGTAGCGGGGGTGCTGGAGACC 2065 38 100.0 31 ...................................... CGGGTCGGCGGCTCCTGGCCAACGTCGGCCA 1996 38 100.0 37 ...................................... TGACTCGGCGCGGGAACGTCGACCAGGAGCCCAACCG 1921 38 94.7 0 ........T.........................A... | ========== ====== ====== ====== ====================================== ======================================= ================== 4 38 98.0 36 GCCAGCGCCGGCGGTCCACCGTCGGCGAGGATCTCAAC # Left flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTTCACCTTGCAGCCAGCGCCGACCGTCCACCGTCGGCGAGGATCTCAACGCGTCCGGGAACTGTCCCCGCCGCTCAACCTCCTT # Right flank : TTCCACTTCACCCCACGCTTGCGGGTCTTTCTCGGCCAGCGCTGACGGTCCACCGTCGGACGTTCCGGCAACTTGGTATGTAGGTTTCAGCGGCTGGGAACGGTCGCTGAAGGTCAAGGCGAAGGCGTTCAACACGGGCTTCCAGCGCATCGTCCATCGGGTTCTGCCTGCTCCGGTAGGGTCCAGGGAGCGAGTCACCAGGTACAGACACTTCAACGCGGCCTGCTCGACGCCCCTGTGTTTGGTCAAGCAAGCGTTGGCCCGACGACCCCGATTATAGTCCTGAAGATTTCGCGGGCGAGGTAGCGCTTCAGGCAGCGGAGGATCTCGCGTTTCGTTCGGCCTTCGGTGGTTGGTCGCTGGACATAGGCGCGGGTGCCGCGGGTCGGCACGGAGTCTGGTCAGGGCGTTCGATCAACTACAGAACACAGCCGCTATCAGCGCCCCGGCGACCAGGTACGGACCAAAGGCAATGCTGTGCGCACGGCGCAGCGCCAGGC # Questionable array : NO Score: 2.76 # Score Detail : 1:0, 2:0, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCCAGCGCCGGCGGTCCACCGTCGGCGAGGATCTCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-12.70,-17.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [35.0-33.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.15 Confidence: HIGH] # Array family : NA // Array 1 4009-4702 **** Predicted by CRISPRDetect 2.4 *** >NZ_AZVX01000082.1 Salinispora mooreana strain CNT-150 B174DRAFT_scaffold_77.78_C, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================== ===================================== ================== 4009 24 100.0 37 ........................ GTTGCGGCTGCCGCCCTCCGGATTGAACCCGGCCTGC 4070 24 100.0 37 ........................ CTGAATTGCTTGGCCGGCGGCCCGCGCGGCTTCCTGC 4131 24 100.0 37 ........................ GTAGCTATCCAGAGCGGTCGTCTTCTCATACAGCTGC 4192 24 100.0 37 ........................ GACCTGGGCCACGCTACTGGCCCCACAGGCAAGCTGC 4253 24 100.0 37 ........................ CTCATAGGTCCGGCCCCGGGTTGACCGCAGAGCCTGC 4314 23 95.8 37 .................-...... TGCAGGATGAGTACGCAGACTCCGGCTGTCCGACTGC 4374 24 100.0 37 ........................ CCCGGCTACACCGACCGCCTACGCGATCTCATCCTGC 4435 24 100.0 37 ........................ CACCCACGTACTCCCACCCAACGCCGGCAGGACCTGC 4496 24 100.0 37 ........................ CGCCGGTAGCAGCGCCTGGACCCCGTCTGCCACCTGC 4557 24 100.0 37 ........................ GTCAAGGAGCTTCATCCGCTTGACGACCTGTCCCTGC 4618 24 100.0 37 ........................ GGGCCGTGCCTGCGACTGGACGATGACCAGCGGCTGC 4679 24 100.0 0 ........................ | ========== ====== ====== ====== ======================== ===================================== ================== 12 24 99.6 37 TCCCCGCACACGCGGGGGTGATCC # Left flank : CGTTGATGACCCGCTGGGTGGCGTGCTCTCCGCCGGCGAGCAGTAGCCGCAGGATTGGTCCGGTGCTGTCCTGGTCGAGCCACGCCGCGTGCGCCGGGACGTGACCGGCCGCCAGGCCGCACGCGCGGTCCGGCGCTGACGCGGCGGCGGGCCGAAGGCCCGCCCTTGACCAAGTAAAGAAACTCTGAACACACACGCTTCAGCCACGTTGTCCGACTCCGGTTGATGCGTTACAGGTTGGCTTCACTTGATGGGTGACACTCCGCCGAGTGCTGGTGGAGATGAGTGTGACCGAACAGCGGCATCGGGCTGTGTTGGAGGTTCGGGCCGGGGGGCTCACGGTGACGAGGGGGCAGCCATGGGTCGTCATCCCTTGAGGAGGGCTCGTTATGCTGCACTCGGCCTTCGAGCTTCACAAGGGTGCCTGGCCTTGATTTTCCGGGTCGAGGTGAACGAAAACTACATAGTTGATCTTTAGCGATGCAGGTCATGAAGCCTGC # Right flank : CCGGGCCCGACGCCTCTGCGCAACACCACCGCCTCAGAGTCGCGTTACGGATTGAAGGGGTGTTCACGATTCTTGGATGTTGCCGATTTCACTCTTGAGCCAGTTCAGTGATTTGAGTAGCAGGTCTTGTTCGAACTGTTGTGGTTGGTCGCTATCTGGTTGGTACTCGGCCATTGCGGCGTGAATGCGGTCGTACCAGCGTTCCAGGGCAGGCCAAGAGTTGTTCTGGGTTCGCCCTGTTTCGATGGCGTGCTGGTATATGACTTTTAGCTCCTGGGCCATCAGCTCGGGCTTTGGTCTTTGTGGGTTAACCCAGTCGTCGGCGAGTACTGGCCGGAGGCGTAGGGCGTGACGGTTCCAGTGCATCAGAATTTCAAGGTCGACGGTGAATCCGTCCGGCAGTTTCGTGGGCCATAGTTCGCGTACTGCCGCGCGCTGTCCGGACCATGGGGTGGAACCGACCTTGGGTAGAATTTCGGGGAAAAGGTATCCTGCTATGG # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TCCCCGCACACGCGGGGGTGATCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched TCCCCGCACACGCGGGGGTGATCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [53.3-33.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 2130-1293 **** Predicted by CRISPRDetect 2.4 *** >NZ_AZVX01000058.1 Salinispora mooreana strain CNT-150 B174DRAFT_scaffold_53.54_C, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================== ================== 2129 30 100.0 36 .............................. GGTTTCACGGACTGTACCGACCATCAATGTTATCCA 2063 30 100.0 36 .............................. GTGTTGGAGCACCGGCCCTTTCCGCTGTTTAGGGAC 1997 30 100.0 37 .............................. AGACGTTCACGCCGCCACCCCCGGAAAGATCGACGTG 1930 30 100.0 38 .............................. GGCATCTGTCGGTGAGCACGCAGGCGGACAACCTGCAG 1862 30 100.0 34 .............................. ATGCGCGGTGCCGGCCTGTCCGGGCGGGGCGGAG 1798 30 100.0 36 .............................. ATACGCACCAGCGCCGTGTCGTGCATCTGGTGGCCG 1732 30 100.0 37 .............................. GTGACACCGACGAACGCCGAGCCGACAGAAGGCAGGA 1665 30 100.0 37 .............................. ACCAGGCCGCCGCGGCAGCCACCGCCCGCAACGCCAC 1598 30 100.0 37 .............................. AATGAGGAGGGGGCCGGTCGCTGACGGTGCATCGCGG 1531 30 96.7 40 ....................T......... ATCAAGTACGGCGCGCAGAGAATGGCGATGCAGCTCTCGG 1461 30 96.7 40 .........A.................... GCGTTCGCGGCAAGGCCGGTCAACGCGTGCATGTCAACGG 1391 30 93.3 40 ......................G.A..... GGTTGGGGTGATGCCGGCGGCATCACGGTGTGGTCCGCGG 1321 29 76.7 0 .................T-.TC.A...CG. | ========== ====== ====== ====== ============================== ======================================== ================== 13 30 97.2 37 GTCCTCATCGCCCCTACCAGGGATCGCAAC # Left flank : GGGCTACCAAACTCCACCACACCCCGACCACCGGCCGCATACCGGCCGCGCTGACGTCGCGCACCAGGAAACACCGGAGCACCGTGCGCGATCGGAGTCATGCCATAGGGCCCTGCACCCTTTTCATGTAGCCGCTCTCCGAGATCAGGATGCGCCACCGCAAGCAACTGGTACGCGATCCCCCGCCCGGGAGCCAGCACCATCGGCCACGGAATCTCCGACGCCCGCGTCACCACGTGCACCCGCAACCGCACCAGCACCTCCCTGCTCTCGTCAACGACGCGGTCACCCTAGACAGACCCACCGACAAAAGAAGTGATCTGTCACATGAACGACGCTCTGCGCCAACGCCAGATCCAGCACCCGACGGGACCGAGACCTTGATCATCTAAGCCGATTGCAGCGATACTCCGGGGTAAGCTGCAGCACCGGAGGTTCACTGCAAAATGAGCCAGCAACTCACCCAACACGAGCCCCCTGACCAGGGACTTAAGTTTCGG # Right flank : CCCAATCCTGACCACCGTGGTCCGGGCGGGTTCCAGTACTTGTCGCAACACACCTGATCATGTGAGGCGTGTTGATGGGACGACGAGGACGGAAGCGCCGGCTCGAGCTGGAGACGGAGTACTGGCGGCTGCTGCAGTCAGGCATGGGTACGTTCGAGGCTTGCCGCATTGTGGGGATCGGTCGCAAGACCGGCTATCGGTGGCGCGCGGAGAGTGGTGGTGTGCCGCCGGCCCGATTGGCTGAGGGCGTCTGGTCCGGCAGGTACCTGTCGCTGTTGGAACGGCAACGGATCGCCACCCTGCGCAGGCAGGGCCTGACGATCAGGGCGATCGCTGAGCAGTTGGGCCGGGCGCCGTCGACAGTGAGTCGGGAGTTGCGCCGCAACACCCGTCCGCATGACCAGGGCGTCTATGACGGCGATCTGGCGCACGCGCGGGCCCGGCAGCGGGCTCAGCGCCCGCGGGGAGGCCGGCTACTCGCCGACATCGGTCTGCGGGCC # Questionable array : NO Score: 3.12 # Score Detail : 1:0, 2:0, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCTCATCGCCCCTACCAGGGATCGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-4.50,-4.30] Score: 0/0.37 # Array degeneracy analysis prediction: R [11-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [40.0-45.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA // Array 2 10626-11920 **** Predicted by CRISPRDetect 2.4 *** >NZ_AZVX01000058.1 Salinispora mooreana strain CNT-150 B174DRAFT_scaffold_53.54_C, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 10626 30 100.0 37 .............................. TTGTCGGCGCAGCGGTTCGCCCTGGACTGGTTCGGCG 10693 30 100.0 34 .............................. TGGCACCACCGTTCGTAGGCGGCGCGGAGTTCAT 10757 30 100.0 37 .............................. AACCTCCGCCGGACTGGCCGGAGTGACCTCTGACCTC 10824 30 100.0 36 .............................. TTGAGATGGGCGGCGATGGTGGGGTCGGACTGGGCG 10890 30 100.0 37 .............................. TGCGTGAGCAGACGACCCCTGCTGTGGCCGGGACCGC 10957 30 100.0 36 .............................. TTGAGATGGGCGGCGATGGTGGGGTCGGACTGGGCG 11023 30 100.0 37 .............................. TGCGTGAGCAGACGACCCCTGCTGTGGCCGGGACCGC 11090 30 100.0 35 .............................. GAGTAGTCCTTGACCGTCACCGCCCGGTTGAGGTA 11155 30 100.0 37 .............................. TTGCGGCCATACCGGATGCCGGTCGGCGGGGCCGGCG 11222 30 100.0 37 .............................. TGTAACCGGATCCGGACCTCGTTCAACGCCGCGCCGT 11289 30 100.0 36 .............................. GACATGCCGAGGAGTGCTGCAGTGCCGGCAACGGAC 11355 30 100.0 38 .............................. GGTACGGGGTCGGCTCCGACTTTGCGTCGTCCGAGGGT 11423 30 100.0 37 .............................. AAAGCCTGCCGGACAGCGGCGAACCTCACCTTATCCG 11490 30 100.0 36 .............................. CACGGCGGCGGAGGTGCGGGAGCAGCTGCGCGTCGT 11556 30 100.0 38 .............................. CCCACCGGGACCTGCTCGCTGACGTGCTGGATGGTGCG 11624 30 100.0 36 .............................. ATGACACCACGTACGGCACGGGGTACGTGTCAGCCA 11690 30 100.0 37 .............................. CTGAGGTGATCGGCCGGAAAAACGGGGCGTCAGCGCG 11757 30 96.7 37 .............................T ACGTGGAGGACAGCCGGCGGACCCCGGCGGATGTGCG 11824 30 100.0 37 .............................. CCAGCCAGCGGGCCGGGCGTACCGAGATGGGCACCAC 11891 30 73.3 0 ..................T.TC.A..GCGG | ========== ====== ====== ====== ============================== ====================================== ================== 20 30 98.5 37 GTCCTCATCGCCCCTACCAGGGATCGCAAC # Left flank : CCAGCACCGCAGCCTCGGCCGGAAGGTCGCCTACGACGAACTGCTGTACCTGGAGGCGCTGCGGCTGGCCCGCTACTGCCTGGAACGCGAGCCGTACAAGCCGTTCCGGATCTGGTGGTGACCCGTGTACGTGATCGTCGTCTACGACACCGCCGCGACCCGCAATCCTAAGATTCTGCGTACCTGTCGCCAGTACCTGCATCACGTCCAACGCAGCGTGTTCGAAGGTGAGCTCAGCGAGGCTCAACTGCGCCGGTTTCGGAGCGCTGTCGACAGGGCGATCGACGCGTCGTACGACAGTGTGCTCGTCTATACGTTCCCTCCCGGCACGACGGGTCAGCGGCAGGAGTGGGGGCGGTCTCAACCCAGCCCTTCAGATATCTTGTGATCTTGGCCGGTTCAGCGACATGCCGAGGTAGATTGCACTACCGGAGGTTCGCTGCAAATTGAGCACGCAACTGGCCAGTCAGAGGGCCCATCACCAGGGACTTAACGTTGGG # Right flank : ATTGGAACTGACCCCCTATCGACGTTTTGGGATTGACCCCCCGGAGGTCGTTTCGTGCTACTTGTTGCGGTCCTTCGCGAGGAGTTCTCGGCGGGCTCTGGTGCGGTAGGACTCGCCTGCGAGGGTGAGGACCTCGGCGTGGTGCACGAGGCGGTCGATCATCGCGGCGGCGACGACTTCGTCGCCGAAGACCTCGCCCCACCGCCCGAACGGCAGGTTCGAGGTGACGAGGATGGAGCCGGCCTCGTAGCGAG # Questionable array : NO Score: 3.19 # Score Detail : 1:0, 2:0, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCTCATCGCCCCTACCAGGGATCGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-4.30,-4.50] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [43.3-45.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 1 77863-76796 **** Predicted by CRISPRDetect 2.4 *** >NZ_AZVX01000021.1 Salinispora mooreana strain CNT-150 B174DRAFT_scaffold_18.19_C, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 77862 29 96.6 32 ............................A GGGGGTCACCGATGCAGCGAGAGCGGCGCAGC 77801 29 100.0 32 ............................. TTCGCCTCCGCGAAGAAGCAGGGCTACGAGAA 77740 29 100.0 32 ............................. ACCGGGCGGAGCGGGCGGAGGTCAGAGGCACC 77679 29 100.0 33 ............................. CCCAGGGCCGCCAGGACATCGGTGTCAGCGCAG 77617 29 96.6 32 ............................T GAGCCGTGCTAGGCAGAGGCTTCCCCCGGCCT 77556 29 96.6 32 ............................T CGGGTGCTGTTACGCCGGCCGTGACGGAGACG 77495 29 100.0 32 ............................. CCCTCCTGGACGACCTCGCCGCCCGCCAAGCC 77434 29 96.6 32 ............................C CAGGCACCGAGTCCGTTGGCGGTCACGTCCCA 77373 29 96.6 32 ............................C CGCATGATGCCGGCCGCTGCTACATCGACGGG 77312 29 96.6 32 ............................C GCGGCAGGCAGACCGGGCTGTTCGTCGGTATC 77251 29 100.0 32 ............................. ACGAAGCCATGCGAGGCGTATGCAGCCTCAGC 77190 29 100.0 32 ............................. ACGAAGCCATGCGAGGCGTATGCAGCCTCAGC 77129 29 96.6 32 ............................C GTGCTGGGGCGGAGCGTTCGGTAAGGTGCCGC 77068 29 96.6 32 ............................T ACGATTGAGCAGGCGACGCGATACAGCCCGGC 77007 29 100.0 32 ............................. ACGTTTCAGCATTTGGCGTGGGTGGCTCGCCG 76946 29 96.6 32 ............................T CAGCGCCGCTTGGACGACACGCTCCCAGCGTC 76885 29 100.0 32 ............................. CGGTGGGGGCCGGTCGGCGGTCAGCGTGGCGA 76824 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================= ================== 18 29 98.3 32 CTCGTCCCCGCACGCGCGGGGGTCTTCCG # Left flank : ACCCGGATCGTTCGCGACATCAAGAGCCTGCTACTCGAAGACGGCCACGCGTTCACCGACGAAGACCTCCACGAACTGTGGGACGACGAACTCGGCAACGTGCCCGGCGGCATCAACTGGGCCTCCGACTACGCCGACAGCCTCAATGAACAAGCCTTCATCGCAGTCAGTGGACCACCAGTCGATGACGAGAAGGTGGACTTTTGACCGTTATCGTCCTTATCGCCACCCAGCAAGGTCTACGCGGCCACCTCACCCGATGGATGATCGAAGTCGCCGCCGGTGTCTTCGTTGGGAACCCCAGCGCTCGCGTCCGTGACCGCCTCTGGAACCTCCTCATCGACCGCGTCAGCGACGGGCAAGCCATCATGGCCGAGCCAGCACAAAACGAACAAGGCTGGGCCATCCGCACCACCGGCAGAGACCGATGGCACCCCGTCGACCTCGACGGACTAATCCTGACAGCCCGAAACCGTCGCTAAAACCCCAGGTCAACAAGC # Right flank : TACGGCTCGCTCGACATCGAGCAATGGGGAGCTAATGACCCGGTGCGTGTTGTTCACGCGTCGGGTCGCACCCTGCTTGTCGAGGTACTCGAGAAGCGGTACCGCGACGCGGCGGCTGGTGTCCCATGCGGTGCGGGCCTGGCTGACGGTGAACGGTTGCTCGATGCTCGCGAGTCGGCGCGCCGCCTCGGCCGGTGCGTCGGGTAGCAGGTAGACATCGGGTGCGAGACGGCAGAGCAGACCGGCGTTGACCGCGGCGGCGAGGTGTTGGCGGGACAGCCGGTGTCGTGTGAGCTCCTCGGTGCTGGGAGCGGCGAACGGGTCCTCGCGCAACCGCGCGTGGATCTCGTCGATCGCTCGGCGCACTGGTTCGGGGAAGCGCGTCTTGGCGTCCTTGCGGCGCACGCCGCCGCTGTCGAGGACAAGCCCTGCGTCGGTGATGAGCGCTTCGATCAGCCGAGGATCGGCGATGCCGGCTCGCCGGGCCGCCGCCTCCGGCG # Questionable array : NO Score: 5.98 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.81, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTCGTCCCCGCACGCGCGGGGGTCTTCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGTCCCCGCGCACGCGGGGGTGTTCCC with 89% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [40.0-43.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.87 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 87458-88644 **** Predicted by CRISPRDetect 2.4 *** >NZ_AZVX01000021.1 Salinispora mooreana strain CNT-150 B174DRAFT_scaffold_18.19_C, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 87458 29 100.0 32 ............................. TTGGCGGGTGAGCCTTATGACCTTGCCTTGGT 87519 29 100.0 32 ............................. CCAATGACGCCGGCAGGTGTTTCGTCGATGGG 87580 29 100.0 32 ............................. CGCCTGATGACCGAGTACCGGATCGGCGCACC 87641 29 100.0 32 ............................. GTGCACACGAGTCCGCCCTGAAGTTGGGCAAG 87702 29 96.6 32 ............................A CAGCCTCGGCGACCTGGCCGTCCTTGCTGTTG 87763 29 96.6 32 ............................G GGCGACCTGACACCGGGCATGGCTGCGGCTCT 87824 29 96.6 32 ............................T TCACTGGATCCTCAGTGGCGCCCTCAGCCGTG 87885 29 96.6 32 ............................G CCCAGGGCAGCGGCGATCCGGGCGAGGGGGGT 87946 29 100.0 32 ............................. ACCCCTGACGGCGGCCACTCTCCCCCCGCTGC 88007 29 100.0 32 ............................. GGCGCGGGCGCGCTGTTGAACGCCATGATCCC 88068 29 100.0 32 ............................. CCGGAGCAGCACATCGGGATCCAGCTCCCGGA 88129 29 96.6 32 ............................T ACACCGGAGCCGTCGTCCGCATCGCCGGACTG 88190 29 89.7 32 .............A..........C...G CTCCGCACCTGGCTGGCGCGCGGATCCTTCGT 88251 29 93.1 32 .......................GA.... GAGCGCAGGTTGCCCAGCCCGCGGGAGAACCG 88312 29 79.3 32 ..GC.........A.........GA...G TCCGGCGGTAACGGTGGAAGCTGCGTGGAAAT 88373 29 82.8 32 ..GC.........A.........GA.... TTGGTGAACCAGGCGTCCAGTAGGGCCACCGC 88434 29 79.3 32 ..GC.........A.........GA...G CTGGTACGCCGACGAGCCGAAACCGGGCTGGC 88495 28 79.3 32 ..GC.........A...-.....GA.... CCGGGCGCGATCTTCGTCGGCTCCTACTCGCG 88555 29 75.9 32 ..GC.........A...A.....GA...G ATGTAGTGGTCAATGTTCACGCCGGCCGAGTC 88616 29 79.3 0 ..GC.........A........CGA.... | ========== ====== ====== ====== ============================= ================================ ================== 20 29 92.1 32 CTCGTCCCCGCACGCGCGGGGGTCTTCCC # Left flank : TGCACTGAAAAGCAGGTGTCGCCTTTCCGACATCGTGAACCCCACACAGCAAAGCCAGAAACGCCCTCCCCCGACCGCCCGTACAACCATCAAGCCTGTCCCGTACCGACGGTGCGAGATAGTGATCCCACAGGCACTCACCCACCGCCGCCGCATCAAACAGATGCTGGAGTAGCAGGTTCATGCTGCCTTCGGCACTGGACTTACCCCAGAAAACCCCGAGAGCGGGATGGCTCGCCAAACTCACCCATCAGACGCTAGCGACCACCTCCGACAATCCGCATCGACAGCAACCGGCAACCGCCTTCAACCGCCCGCAGCTGACGGGCGTCCTCGGCGCCGCAACCTCGGCGGCCGGCTCGCCGGGCCAGCCGACTCCTGACGGCCACCTACCTCCCGAAAGGTAGCCAGCCACAGCCCCCACGAATCGGTGTCCGCCAGCTACGATCGAACCGATCTAAAATCACCAAGAGCGCCAACAAAGTCGCAGGTCATCAAGC # Right flank : CACACGCATCAGTCGTAGGAGGGCGACCTGGTATACAGCGGTGAGCTGCAACCGTATGGGTACGTCATGGCCTTGTGAATCTTCCCGTACCGCAACGGGTTCGCCGCCTATGTCTGGGTCACCAAGCCGGACGGCAAGCGCACCCGCAAGTACGCCTACGGCAAGACCCGCGATGAGGTACACGACAAGTGGATTCGGCTACACCAGCAGGCCAAGGCCGGACCGATCGCCACGAACGTCCCCACGTTGGCGAGCTACATGACGTACTGGCTAGTACTCCAGCCGGGGTTGTTGACCTTGACTGAGCTGCGGTTTGATGCGATGCGGGAACGAGGGCAGCCACCGCCGATCATGGGTGGTTGTGTGGACTGACCATGATGCAGCGGTGGCTGCCGGATACAGGGTAGACGCCCAGCGGTGGCGGGTGTTGTTCGACGACTTGATGCTGACGGTCGGGCAGCGTTTCCGCAGGCCGGAGCCTCGCCGTCGGGTGCGTGACT # Questionable array : NO Score: 5.37 # Score Detail : 1:0, 2:3, 3:0, 4:0.60, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.51, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTCGTCCCCGCACGCGCGGGGGTCTTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGTCCCCGCGCACGCGGGGGTGTTCCC with 89% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-22] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [50.0-40.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 919-711 **** Predicted by CRISPRDetect 2.4 *** >NZ_AZVX01000047.1 Salinispora mooreana strain CNT-150 B174DRAFT_scaffold_43.44_C, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================== ===================================== ================== 918 24 100.0 37 ........................ GTTGTCCACCTGAGCGGCCAGTGCGCCGTTGTCCTGC 857 24 100.0 37 ........................ CTGCTGCGCGACCACGACTACCGGCAGCCCCTCCTGC 796 24 100.0 37 ........................ AGGCGAGTTCGACCTGGCGGTACTCGCGCATTTCTGC 735 24 91.7 0 ........TT.............. | T [713] ========== ====== ====== ====== ======================== ===================================== ================== 4 24 97.9 37 TCCCCGCACACGCGGGGGTGATCC # Left flank : TCGGACGACATCCTCGTTCAACTTCCCGAACGCTGGGCACTCATCCACCTCACCTGGAAAGGCACCCCGGAGATACCGCCCTGGCCAAGGACCGAGTTCTACAGCACCATCCACACCCTCGTGCAGGCCCTCCAAGAGACAGACTGAACACCAAGAAACAAGATCGTCTAGCCGGACGTGTCACCCACGTCCCGAGACTGATCTGTCACGCAGGTCCTGAGACCCGACAACGCTTCAGCCACGTCTTGATGGGTGACACTCCGCCGAGTGCTGGTGGAGATGAGTGTGACCGAACAGCGACATCGGGCTGTGTTGAAGGTTCGGCCAGGGGGCTCACGGTGACGAGGGGGCAGCCATGGGTCATCCTCCCTTGAGGAGGGCTCGTTATGCTGCATCCAGACTCCATGGCTTTACAAAGGGTGCCTGACTTTTGATCTTCCGGGTCGAAGTGAACGAAAACTACATAGTTGATCTATAGAGGTGCAGGTCAGGAAGCCTGC # Right flank : GAGCCCGACGCCTTCGCGCAACAACCGCCTCAGAGTCGCGTTACGGATTGAAGGGGTGTTCACGATTCTTGGATCTTGCCGATTTCGCTCTTAAGCCAGTTCAGTGATTTGAGTAGCAGGTCTTGTTCGAACTGTTGTGGTTGGTCGCTATCTGGTTGGTACTCGACCATGGCGGCGTGAATGCGGTCGTACCAACGTTCCAGGGCAGGCCAAGAGTTGTTCTGGGCTCGCCCTGTTTCGATGGCGTGCTGGAATATGACTTTAAGCTCCTGCGCCATCAGCTCGGGCTTTGGTCTTTGTGGGTTAACCCAGTCGTCGGCGAGTACTGGCCGGAGGCGTAGGGCACGACGGTTCCAGTGCATCAGAATTTCAAGGTCGACGGTGAATCCGTCCGGCAGATTCGTGGGCCATAGTTCGCGCACTGCCGCGCGTTGTCCGGACCATGGAGTTGAGCCAACCTTGGGTAGAATTTCGGGGAAAAGGTATCCTGCTATGGGGGC # Questionable array : NO Score: 5.76 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TCCCCGCACACGCGGGGGTGATCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched TCCCCGCACACGCGGGGGTGATCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-13.10,-13.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [38.3-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 13746-14148 **** Predicted by CRISPRDetect 2.4 *** >NZ_AZVX01000026.1 Salinispora mooreana strain CNT-150 B174DRAFT_scaffold_23.24_C, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================================== ================== 13746 30 100.0 47 .............................. TGAGGCCTACGCCTAACCATCACCACCCCCACCCGCCGCACCAACGT 13823 30 100.0 42 .............................. TGAGGCTCTGGCTAGTGATGCGGGTGAGGCGGTAGCAGATGC 13895 30 100.0 47 .............................. CGAGGCGTCCACTCATTGGTCGAGTAGATGAGCGGTTTGATGGTCAG 13972 30 96.7 42 .............G................ TGAGGCACGGCGGCGCAACTGCTGCGGGTCGCGCACCACCTA 14044 30 96.7 43 .............G................ TGAGGGGCGTTCATCGCGGCGTCGGCAATGTCGCCGTTGATCT CC [14068] 14119 30 96.7 0 .............G................ | ========== ====== ====== ====== ============================== =============================================== ================== 6 30 98.4 44 GCCGCAGCTCCCAACGGAGCTGCCCTTCAT # Left flank : GGCATCAAAACCCGATGAACCTTGACGACGTGCGACGCTACCTCATCGCGTACGACATATCCGACGACATCCGCCGAACGAAGGTCGCCAAGAAACTCGAATCATACGGCGACCGCATACAGCACAGCGTGTTCATCGTGAACACCCGGCCAGCAAAGTTCCTACGGCTCCGCACCCAACTCACCGAAATGATCGACGAGGAAAGAGACTCCGTCATCTTCTGCAACCTGGGTACCCTTCGCGAGAACAACCGTCGACCACTCGACGTGATCGGCTGCAGCCGCACCATCACCAACCACGGACCAGCGATCCTCTGAACCACCGGCGAAGCCTGCGTCGTCTCGCCGCCAAGCGCGGACCCGTCGCCAAGGTGTCAGCCCAGCTCACATGCCGGGTAGGTCTGCGTACGCGGCCTTGAGCGCTACTCCGCCTCGCAGGAAGCGCACCCTTCGCAGCAGACCGGTTCAGGTGCAGGTCAGAGCGGCTATAATTCTGACCCA # Right flank : TTCCGATCGGGGTCTGTCAACGGCGGACTAGATCTCAGCGCGTCGTGGACATCCGGCCAGCAAAGTTCCTACGGCTCCGCACCCAACTCACCGAAATGATCGGCGAGGAAAGAGACTCCGTCATCTTCTGCAACCTGGGTACCCTTCGCGAGAACAACCGTCGATCGCTCGACGTGATCGGCTGCAGCCGCACCATCACCAACCACGGACCAGCGATCCTCTGAACCACCGGCGAAGCCTGCGTCGTCTCGCCACTAAGCGCGGACCCGTCGCCAGGGTGTCAGCCCAGCTCACATGCCGGGTAGGTCTGCGTACGCGGCCTTGAGCGCTACTCCGCCTCGCAGGAAGCGCACCCTTCGCAGCAGACCGGTTCAGGTGCAGGTCAGAGCGGCTAAGATTCTGACCCAGTCGCAGCTCCCAGCGGAGCTGCCCTTCATTGAGGCTCGGGCGCGCCGTGCGGCAGCCGGGCCAGCCGGGCCAGCCGGGCCAGGGTCGCAGCT # Questionable array : NO Score: 3.18 # Score Detail : 1:0, 2:0, 3:0, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCCGCAGCTCCCAACGGAGCTGCCCTTCAT # Alternate repeat : GCCGCAGCTCCCAGCGGAGCTGCCCTTCAT # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-9.10,-10.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [40.0-35.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.37 Confidence: LOW] # Array family : NA // Array 2 14746-14555 **** Predicted by CRISPRDetect 2.4 *** >NZ_AZVX01000026.1 Salinispora mooreana strain CNT-150 B174DRAFT_scaffold_23.24_C, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ================================================ ================== 14745 36 100.0 35 .................................... GGCCGGCGAGGACGTCCATGACCATGGTGGTGGGC 14674 36 100.0 48 .................................... CCTGGCCCGGCTGGCCCGGCTGGCCCGGCTGCCGCACGGCGCGCCCGA 14590 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ================================================ ================== 3 36 100.0 42 GCCTCAATGAAGGGCAGCTCCGCTGGGAGCTGCGAC # Left flank : GGCCGTGTCGGTGGCCGTACTCCGGCGTGATCTCGCCACACGACGGTTCTACCGCCGCCGGGCACTACTTGCCCGTTGCCTGGCCCGCCGTGCAGCAGCACGTCTACCCTCTGACGGTACGTGCGTGACGAGCGCGGGACGCGACGGACGAGGTCCTGATGCCCCCAGATGGCTGGCGCCTGTACGCGGGCTGGTCCCCGCAACTGGGCGTTGCTGCGGGGACCAGCTTGTCGGTGGCCTGCGGCCAAGGCTGCTCCACCTGCGGGTGGCCGTGGCCAGCAGCCGAGCGGTGACCTCGTCGACCTGTTCAGGTTCGCCGCGGGCCCTACCGCTCGCCAGCGCCGGTCCTGCGCTGTGGATAGCTCCGGTGCTTGTGGATGATTCCCTGATCATGGCCGGATCTGCTAGCCCTCGTGTCACCAGCAGCGCGGACGCAGGGGCGGCCGTAGAAGGGACCACACTCGTATGGCACCAAGAGTAAGGCGTGGACGACGTTTGAA # Right flank : TGGGTCAGAATCTTAGCCGCTCTGACCTGCACCTGAACCGGTCTGCTGCGAAGGGTGCGCTTCCTGCGAGGCGGAGTAGCGCTCAAGGCCGCGTACGCAGACCTACCCGGCATGTGAGCTGGGCTGACACCCTGGCGACGGGTCCGCGCTTAGTGGCGAGACGACGCAGGCTTCGCCGGTGGTTCAGAGGATCGCTGGTCCGTGGTTGGTGATGGTGCGGCTGCAGCCGATCACGTCGAGCGATCGACGGTTGTTCTCGCGAAGGGTACCCAGGTTGCAGAAGATGACGGAGTCTCTTTCCTCGCCGATCATTTCGGTGAGTTGGGTGCGGAGCCGTAGGAACTTTGCTGGCCGGATGTCCACGACGCGCTGAGATCTAGTCCGCCGTTGACAGACCCCGATCGGAATGAAGGGCAGCTCCGCTGGGAGCTGCGGCAGATCAACGGCGACATTGCCGACGCCGCGATGAACGCCCCTCAATGAAGGGGGCAGCTCCGCTG # Questionable array : NO Score: 2.67 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCCTCAATGAAGGGCAGCTCCGCTGGGAGCTGCGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-9.10,-10.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [38.3-43.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.74 Confidence: HIGH] # Array family : NA // Array 3 15898-15640 **** Predicted by CRISPRDetect 2.4 *** >NZ_AZVX01000026.1 Salinispora mooreana strain CNT-150 B174DRAFT_scaffold_23.24_C, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== =========================================== ================== 15897 35 97.1 35 ....................C.............. ACATGACCGATAGCGCGTGGCTTGCCCGCGCGATG 15827 35 100.0 40 ................................... CAACATGCTGAGCTGGCACTGCGATCGCTGCCACACCCCG 15752 35 100.0 43 ................................... TTCTACGGGCACGCTTTCAGGCACAGCGTTTGCCCACAGACTC 15674 35 100.0 0 ................................... | ========== ====== ====== ====== =================================== =========================================== ================== 4 35 99.3 40 CCTCAATGAAGGGCAGCTCCGCTGGGAGCTGCGGC # Left flank : ATCCGGTGCACCGCACTCATGCGCGCAGCGGCGCTCGACCTCAACGAACAAGGCGACATCTGGGCACGAGTCGTCCAGCACCGCGCCGAACACCTGCCGCCCACCCCCGACACCCGCACCTGGGAAGGCTTCACCAACAACGTCAGCCACCTGCTCACTGGCACCGCCCGAACCACCGACGGCTGGCACGCCGCGTTCACCGAAGCCGGTATGGAACTCCGACGCCAACGCGAAACCGGCCAGCTCACCCGGGGTCTCCGTGCCGTGGTCGCCCTACACGTGATCTTCCACTGGAACCGGCTCGGGCTGCCCGCCGCCGCCCAGGCCACTCTCGCGCAAGCCGCCACTGAAGCCATCTTCGGCACCGCACCTGCGCCATCGGGTCAGCACTCGACACCGCCGGCCGACTGAGATCGCCAGCACGCCGAGCCGACACCATGGTGTGGTGGCGGAGATCGACGCTGACGTGGCGTTCACGCCACGCTGTGACACGCTCCGCG # Right flank : TGGGTCAGAATCTTAGCCGCTCTGATCTGCACCTGAACCGGTCTGCTGCGAAGGGTGCGCTCCCTGCGAGGCGGAGTAGCGCTCAAGGCCGCGTACCCGCAGACCTACCCGGCGTGTGAGCTGGACTGACACCCTGGCGACGGGTGCGCGCTTAGCGGCGAGACGACGCGGGCTTCGCCGGTGGTTCAGGGGCCGTCGTCCCCAGATGCCGTTGCACCACCGCCGGACGCTCGCCTCCACGCAGGTGATCGTACGCATGTTCGTTTCGTGGTGAGGTGGGATGGCGTACAAGCCTGCCCGTGCGGCGCCAGGGCGGGTTACTCGCAGCGGTCTTCGGCGCCTCGGCCGTACGGCTCGCAGCAGTCGGGACGGTGTCGGTAGACCCGCAGGTTGCGGCCGTGTCGGTGGCCGTACTCCGGCGTGATCTCGCCACACGACGGTTCTACCGCCGCCGGGCACTACTTGCCCGTTGCCTGGCCCGCCGTGCAGCAGCACGTCTA # Questionable array : NO Score: 2.82 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCTCAATGAAGGGCAGCTCCGCTGGGAGCTGCGGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-9.10,-10.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [40.0-31.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,0.74 Confidence: LOW] # Array family : NA //