Array 1 620757-619405 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHZRQ010000003.1 Enterobacter kobei strain ECC145 NODE_3_length_632445_cov_110.087841, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 620756 28 100.0 33 ............................ CAGTAGAAATCATAGCGGGTCTGCCTGCTGAAC 620695 28 100.0 32 ............................ TCAGCAGCAGACACCAGATCTCTCTCCCATTT 620635 28 100.0 33 ............................ CTGCGTAGCCTGGTAATTAGTACGAAGAGCATT 620574 28 100.0 32 ............................ TGTTGTTGAATAAACGCAAATACATCTGCTTC 620514 28 100.0 32 ............................ AACCGAAAAAGAAGTTACAGCCGCGCAACGTC 620454 28 100.0 32 ............................ GGGTTATACCGTCACGCGGCCAACCGAAAAAG 620394 28 100.0 32 ............................ GCGAGAGACAACCTTGTCGTAATTAACAATGT 620334 28 100.0 32 ............................ AAAGACGTCCAAGTCAACTGGATCACCGTTAC 620274 28 100.0 32 ............................ CACAAGGAAGATGATTAATGCAAATCAAACAC 620214 28 100.0 32 ............................ TCAACCCCAAATGTTGAGCGGCGCACCCCAGC 620154 28 100.0 32 ............................ ATGGAGTCAAACCGCAGGCGCCAGGCTGAGAT 620094 28 100.0 32 ............................ AAAATCACCGAAGTGGCGATCACTTCCGTTCT 620034 28 100.0 32 ............................ CTCGAGCATTTCGATAACTTCGCGGCGCTTGT 619974 28 100.0 33 ............................ CTCTTTGACTGGCTGAATACTCATCATTGCGCT 619913 28 100.0 32 ............................ TTTTTTGACACCCTACGCAGATTGCGAAGAAC 619853 28 96.4 32 ........T................... CGCCCGAGGTGATATCAATATATTTGCTAAAG 619793 28 100.0 32 ............................ GAAGGCGGAACGCTCGTTCGCAAACATCTCAC 619733 28 100.0 32 ............................ GCAGGTCACTAATCTGGGCGATATGACGCAGA 619673 28 100.0 32 ............................ TGAAAACTTTTGTCAGTTAGACCGTTTATGGA 619613 28 100.0 32 ............................ TTGTAAGTCGCTCACTATCCAGCGCCGCGAAC 619553 28 100.0 32 ............................ CGCATCAATACGCGCGGCGATCTGCGTCATAT 619493 28 100.0 32 ............................ AGTGATGGGGGATATTACGGCAAAGCCGTAAT 619433 28 92.9 0 .........A.....C............ | C [619408] ========== ====== ====== ====== ============================ ================================= ================== 23 28 99.5 32 GTGCACTGCCGTACAGGCAGCTTAGAAA # Left flank : ACGGGCCACGCGCTCGCTCTCATCCGGCGTCAGCGTCCGTCCCGCGCTTTTGCGGCGGGCCACGTTACGCTCATTAATTCCAGTGACGCGCAAAATGTCCGCTTTCGACATCGCCGTCCACTCATGAATATTGTCGAGGACGCTGACGGGTAATCCCTGATTGAGAAATTCAATCAGCCGCATACCTCTGTTTGCTGGTAAACCGGCGTACCGCCAAAGCGCGTTATCAGCAGGTTTCTGCGCGGGGATCCATGTTCTCATGTTGCCTCCTGGGTGATGTCATTTGTCATGGTTAAGTATAGTCATTTGTCATAATGAATGGAATGGGTGTTTTTTAAGCAGGGTGGTTTATAAGAAGAAGGGCGTTTGACCCTAATTTTTAGTGCGTTTGTAATGCATTGATTTTAAATGGATATTTTGAGAGGGTAAAAAAGAGGGTAAAAGATGGGTTTTTAGCTTTTTTTGTATGAAAATCATAATGGTGTGGGGATATTATTTGA # Right flank : ATAGAAAATAAGGACTCCCCTCCTTACTTTCTACACTGTCGAGCAGACAGCCCCGCGCTGAAACGAACCGCCAAATAATTGTTCAAATAATCAACAGCACCACAAAAAAATAAGGCCGGGAAAATCCCGGCCTTATTTAATATTCATCTGCCATTACAGGCGAAAACAATTAGCGACTACGGAAGACAATGCGGCCTTTGCTCAGGTCGTACGGGGTCAGTTCAACAGTCACTTTGTCGCCCGTTAAAATGCGGATATAGTTTTTGCGCATTTTACCGGAGATGTGCGCAGTTACCACGTGACCGTTTTCCAGCTCTACGCGAAACATGGTGTTAGGCAACGTATCAAGTACGGTACCCTGCATTTCAATATTGTCTTCTTTGGCCATCTAATCCTCTGGGGTATCACTACCAAGTTTTGAACCGGCAAGATAATGCCGAAATTCATCAATTAAGTAAAGAATTGCGCGTTTAAAACGCAGCAAAACAGTTTCGGCGCAT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [48.3-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 631384-630574 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHZRQ010000003.1 Enterobacter kobei strain ECC145 NODE_3_length_632445_cov_110.087841, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 631383 28 100.0 32 ............................ TAAGTGAGCGAGAGTAGGCCAGTAGAAATCAT 631323 28 100.0 32 ............................ GGAGAGGAGCTTATCGTAATAACGCGGAGGAC 631263 28 100.0 32 ............................ ATAACCAACCTCGCAAATAGAATAGAGCGCAA 631203 28 100.0 32 ............................ GCTGTGAGTTTTGGTGTCACCTGGCACAGTTA 631143 28 100.0 32 ............................ GGCATCGGCCGCGCACACTTCAAATCGAAGAA 631083 28 100.0 32 ............................ TGCTGCGGTGCTGCTGCTAGCATGGCCACAAC 631023 28 100.0 33 ............................ GTGGAAGCGCGTGAAAAATTACGCTACAGACTT 630962 28 100.0 32 ............................ TCAGACCGAACAAAGAGACGCTGCGCACGTTT 630902 28 100.0 32 ............................ GACGTCATCACATACGCGGCCCACGTCACATC 630842 28 100.0 33 ............................ ACTTCGCGCAGGTGCCACGACTCCACGCCGATT 630781 28 100.0 32 ............................ ACCACTGCCCGCGACGTACACCCAGTGCGCCT 630721 28 100.0 32 ............................ AGTACGGGGCGAATATGTCAGAGTTCGCCCGC 630661 28 100.0 32 ............................ TCTACAGGACAAAACTGAATTACCAGCAGTCT 630601 28 75.0 0 .....................ACCTCTC | ========== ====== ====== ====== ============================ ================================= ================== 14 28 98.2 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : CTCCCTCAAACGCAGCCCGTATGCCGTTGCCTTGGTGCATACCTGGAAGAAATGAAAACCGGCCTCACAGAATCAATGCGTGACTTTCAGGTGGTGGAATTTGACAACGAAGCCGAACAACCGCGACAAAAAGAGTGGTTGCTGGAAGAGACAGAAACGAAATGCGACTACTGCCGGGCATTAAACCATGTGCTGCTGGTATCGCATTTTGACCGCGATATGTTGCCGCACCTGACGGGATTACTGCATGACATCACACATTCAATGGCGGCAGATGTGGTATCTCCTCATGATGCTGGAACGGGAAATTCTGTTATTTCTTGAGTGGAGTGCGCACCGCCAAGGGATGTCCCCTGGCGACAACGGAGAAACCCTTTTTTTGAGATGCTTTATAACTCATTGATTTATAATGTTTGCTTTTACGTTGCAGAAAAAAGGGTTTAGCATGGTAACGTTGCTTAGTTGCCTTAATAACAATAAGATAGCGCTGTTTTCTTCCA # Right flank : AAACCAACCCACTATAATATTCACCAAACCTATTTAAAACCTTATACCATTCAATCTGCACTCTCTGCTTCCACAATAAATAAAAAACCTATTCACGCATAAATTATATTCCATTGAATATATTATTCGTAAAAATAATATATTGTCATGAAAACATGATTTTCCACTTTATTACCACGATGATTATTATTCATTTGATGTCCGTCACATTTGTTTTCATTCGTTCTTCGCTAACATACTGCACATTCAACACCTTGAAATCAAAGCCCTTGCCATGTCCGTAAACAGCATCACCCCTACAGACTTAAAAACCATTCTGCATTCAAAGCGTGCCAATATTTATTACCTGGAAAAATGTCGCATTCAAGTGAATGGTGGCCGTGTTGAATATGTTACCCAGGAAGGAAAAGAGTCGTTTTACTGGAATATTCCTATCGCTAATACTACGGCGGTAATGCTGGGAATGGGAACCTCTGTTACACAAATGGCAATGCGGGAAT # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //