Array 1 327276-329109 **** Predicted by CRISPRDetect 2.4 *** >NZ_QZEA01000001.1 Adlercreutzia caecimuris strain 1xD42-21 Scaffold1_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ==================================== ================== 327276 33 100.0 34 ................................. CTCATACGCACTCCCTCCTCATCAGGTACTCCGG 327343 33 100.0 33 ................................. TCCAGAATGCTCACCACTTCGATGAGCGCGATG 327409 33 100.0 34 ................................. CGTATCCCACAGCCGCGCCAATGCGGGGAAAGTG 327476 33 100.0 36 ................................. ATCGCCGCGCTCGACGTGCTGGCGCGCGGGAACCTC 327545 33 100.0 35 ................................. ATAGCCGACTGCGTGGACGTGGGGCTGTTCGATCG 327613 33 100.0 34 ................................. TACCAAGAGCCGTACGGCGAGTACCTGCCCGAGG 327680 33 100.0 33 ................................. GTCCAACTTGTACTTCATGAACGCAAGGTTGGG 327746 33 100.0 33 ................................. ATCAACTCCACGTCATCCACAACGATTTCAACG 327812 33 100.0 34 ................................. TCCCATGAACCAAGCGTGGTGATGGATACGCCAA 327879 33 100.0 33 ................................. TGTAGTGGGCGTGGCGGTGTATAGTGTGTGGTG 327945 33 100.0 33 ................................. TTCGTAACGAAGCCCTTCACGTTGCCTGCCACC 328011 33 100.0 35 ................................. TTCGGAGTGGCCCAGCGACGCCGCCGTGTGTTCCT 328079 33 100.0 33 ................................. TACGATTACATTTCCGATTACCCGTGGGTTTCC 328145 33 100.0 34 ................................. GCCAATCACGAGCTTCAAACGGACGGATGGCGCA 328212 33 100.0 33 ................................. ATACGGTGCAGGTGGTCACCCGCTTCCGGCCCC 328278 33 100.0 34 ................................. GGCTCCATAAATGGTGACTCATCCAGAGTGAAGC 328345 33 100.0 34 ................................. GACGAAGAGGGAGGAGACCCCTATGAACCCCATG 328412 33 100.0 34 ................................. GCCAAGCGCCCCGAGCCTGACAGCCTGGAGAGGC 328479 33 100.0 32 ................................. TCTGCGGCCTGCTCGTCCTCGGCCTGGATCGA 328544 33 93.9 33 .......A..........G.............. TACACGAAACAGCCCGCAGGCTTCCAGCCCTCT G [328558] 328611 33 97.0 33 ..................G.............. CACAGCCCCATAAAGCACACGTCCAATTCCGCA 328677 33 97.0 33 ..................G.............. AGGGATTCGCACGGGTCAAACCGCCCTGTTTGT 328743 33 97.0 33 ...................A............. AAGCGCCTCATCCGGGGCATGGTAGGATGCGAT 328809 33 100.0 34 ................................. CTTGGGACTGAGAACAAGGACATTAAGGGTGATT 328876 33 97.0 34 .........................G....... GAGTGGCCGAGCCGCTCCTGCACCGTCCGGGCGT 328943 33 97.0 34 .........................G....... GGCGGTGCGCTCAAGCAGGGCGTGGTGATGAGAG 329010 33 97.0 33 ..................G.............. GGGACCCAGTACGAGGATCTCGAGTCGAGTCTC G [329024] 329077 33 93.9 0 ..............................G.C | ========== ====== ====== ====== ================================= ==================================== ================== 28 33 98.9 34 GTCGCTCCCCGCAAGGGGAGCGTGGATTGAAAT # Left flank : CAAAATGCTGACGGTTATTACCTACGACGTGAATACAGAGACCGCTGAGGGGCGAAGGCGATTGAGGAAAGTCGCCAGGCATTGCGTCAACTATGGGCAGCGCGTCCAGAACTCTGTGTTTGAATGTGTGGCAGATGCTGCCACAATGGTCAAGATAAAAGCAGATCTGATTGCCATGATGGGGGAGGATGACAGCCTGCGCTTCTATGACTTGGGCAACAATTACGCTGGGAAGATCGAGCATTACGGCAGTCATGAAACTTATGAGGCAGAGGGCTTTCTCTCGTTATGACCCGTTCCGAGCGTAACGGCCTGGTGGGCGCTGACTTATCTGACGAGATCGGGCGGACGGTGCGAACATGGGGCGTTCAGAATAACTGCGTGAGGTTCGCACCGCTTTGAGGCGTGATATACGTTTTCAAGAGGTTGGTATACCCCCAATACGGGATGCAGTTCGGCATATCTTGACATCAAGCACCTTAACAATGCAATATGTAGCG # Right flank : CAGTGGGGCGGTCTGCGCCACGGCAGCGATGAAGCCTCCTCTCTGCGGGAAGGGTGCAAGCGTTGTTGGGCGGAGTGTTGGAAGTTCGGCGGGCAAGTTCTTTTACGCCAGCCCGCTCGGGTATGAAATTCGCACGTTGTTGTTTAGATGCTCGACATGCTATTCGCCCACCAGCCCTTCTCGGAGACGCGCGCCCTTGAATATAGGGGTGCTCCTGTGCCCCCTACGGCTTGCGGTGGGGAGGGCTGGGGGCGCAAAAAACCCGCCCCAAGGATGACGACCAGAAGGCGGGTTAGCACCCCGAGGGGCGCGGTTCGGTTCCGCGTCCCTTGGTTTGGAACAGTATACACCCGATGAAAGGGGAAGGGTGTGAAAGAGTATCGGTTCAAGCCCCCGGTCACGGCGGCTGTCAAGTGCGTCGGCATCGACGAGGAGCAGGTTTTGGAGCAGTGGCATTCTGACTAGTGCTCAAACTCGCATGCCCTTCGTCGCTGGGCTCG # Questionable array : NO Score: 9.21 # Score Detail : 1:0, 2:3, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCCCGCAAGGGGAGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: F [7,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCTCTCCGCAAGGAGGGCGTGGATTGAAAC with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-9.30,-8.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [56.7-31.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [10.42,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //