Array 1 226433-226949 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JAGEXH010000004.1 Escherichia coli strain BfR-EC-17660 4, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence              	Spacer_Sequence                 	Insertion/Deletion
==========	======	======	======	=============================	================================	==================
    226433	    29	 100.0	    32	.............................	CCGGAAATTGACCGGGCCGCACTGATGGCGCG	
    226494	    29	 100.0	    32	.............................	CAAATGCATCTCTGACGGTGAAAGTCAAAGAT	
    226555	    29	  96.6	    32	.......T.....................	GCATCTTTTACTTTCGTCGGTTTATTTGTCTC	
    226616	    29	 100.0	    32	.............................	AATTTCTTTGGTTGTATGTGTCATCTTATTTG	
    226677	    29	 100.0	    32	.............................	TTTATAGAGGTCGGTTGTTTCGTGTGATGTTC	
    226738	    29	 100.0	    32	.............................	AGCGTGATTAGTTGCGACTCCATCAGGCCTTT	
    226799	    29	 100.0	    32	.............................	AATAAATATCAAAAATTACGCGTGGCGGCAGA	
    226860	    29	  96.6	    32	..........T..................	TCATTAATAAGGAAAAACAAGCATTTAATGCA	
    226921	    29	  96.6	     0	............................A	|                               	
==========	======	======	======	=============================	================================	==================
         9	    29	  98.9	    32	GAGTTCCCCGCGCCAGCGGGGATAAACCG	                                	       

# Left flank :   TGGATGAACTACTGGCAACGCTGACCGATGATAAACCGCGAGTCATTGCACTGCAGCCGATTAGCCAAAAGGATGATGCCACACGATTGTGCATTGAAACCTGCATTGCGCGTAATTGGCGTTTGTCGATGCAAACACATAAATATCTAAATATTGCCTGATTAAACATTTATAAGCGTTATAAATGGGTGGAACCTGTAAAGACTTCTACTCATTTATATTGTTTGTCGCCTCTGAAAACTCCTCCATTTTACCCATCCAGGGCTAATCATTAGCATTCTCTACAAATTCTGTGGCATTAATTTTTCGCTGGAGTGAAAATTATTGCGGTAAAGTTTGGTAGATTTTAGTTTGTATAGAGTTATTTTAAATATTTACCTTTTTAATCAATGGATTAAGTGCTCTTTAACATAATGGATGTGTTGTTTGTGTGATACTGTAAAGTTGGTAGATTGTGACTGGCTTAAAAAATCATTAATTAATAATAGGTTATGTTTAGA
# Right flank :  ACCATATAACCCGTTATCTCTTTCTCAAGTTTTTATATTAGCAGTACTTGTAATAAGCAACATATCCACGTAACACCTCATGTTCAAAATAGTTCCCCATGCCAGATAAGTTCACAATTATCGATACAAAAAATCAAATTTAATCAAAGTGTTATTTGTATAATTCTTAAGCCGTTAAGAAATTTTAATCTATTATTTTTTTAATGTTAATTAATGCCTGTTAATTTTTTCTTTAGTATAGCAGTGTATTTTTTAAGCTTGTTATTCATTGATTAAGTAATAAATCTGGAAGTTTGTCTTTGTTTTGAGGCTAATGAGTGGTTTTACATAACCGCCTCTATAGGCTGTTGATGAATAGTTCTTATGAATAAAGATATCCAGTTCATACTTTAAATGAAAATTTATAAAGTACGGTTTGCGTTGTCTTTTATTCTAAGGACATCGAGTGTAGTTAATATTCCTTGTAACAACAGGGATAAACCGAACTAGTTAAAGTTTTT

# Questionable array : NO	 Score: 6.21
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GAGTTCCCCGCGCCAGCGGGGATAAACCG
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     F [6,3] Score: 0.37/0.37
# 	Reference repeat match prediction:         F [matched GAGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-13.50,-12.00] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [1-2] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [75.0-68.3]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [5.65,0   Confidence: HIGH] 

# Array family : I-E [Matched known repeat from this family],   
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