Array 1 1554309-1553149 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP081855.1 Limosilactobacillus panis strain MT-01 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ========================================= ================== 1554308 30 100.0 35 .............................. GAATGGGATAAATTCTTACATCAAGTTTTCAATAA 1554243 30 100.0 37 .............................. ATCGTATTTTGAATAGGCAAACTATTAGAGTTAACTA 1554176 30 100.0 36 .............................. ATTGCAAACACTAGCCGCGTCCTGGTATGGGTCGCC 1554110 30 100.0 37 .............................. CAAGTCGTCCGCTGGTAAGGCCCCTCAAACTGGTGCT 1554043 30 100.0 36 .............................. TTCATAATGGGCGAAGAAGAATTTGACGACGGCATG 1553977 30 100.0 36 .............................. ATTTAAAGAGGCGTACCATCAGCTTCAACCGAAGCA 1553911 30 100.0 36 .............................. CTCGTTATCTTTTGCAAAAGTAATCTTATCTAGCTC 1553845 30 100.0 36 .............................. ATCTCTTTGATCTCCTTGCCGGCCTGGTCCGGAATG 1553779 30 100.0 37 .............................. TCATTGTTCTTTACAGCGTAGTCTTCAATCAAACGAT 1553712 30 100.0 36 .............................. CACGTCAAACTTTATGTAAAAGATGAGAATGGTAAT 1553646 30 100.0 37 .............................. CATTTGCAAGTTGTAGCCTCTGTCTTGGATAAATGGC 1553579 30 100.0 35 .............................. GCCACAGGCTTGCTACTACAATTTTTGGGATAAGT 1553514 30 100.0 36 .............................. GTCTTTTACTCTTACTCCGGAATGGCTAACCTGTGG 1553448 30 100.0 34 .............................. ACAACTTACCAAGATATGGTCACTAAGATGACCA 1553384 30 100.0 39 .............................. TCAAGTAGTCATGCACCACTTGAAAGCAATCAAAAACCC 1553315 30 100.0 41 .............................. GCTATACTCTTAATGCTTCTAACGTTAAAAGCAATCATTTA 1553244 30 100.0 36 .............................. ATTTATGCCTGATTACTTACGTCTTACCTTATAGCT 1553178 30 90.0 0 ...................A...C..G... | ========== ====== ====== ====== ============================== ========================================= ================== 18 30 99.4 37 GTATTTATCTAATAGAAGTGGAATGTAAAT # Left flank : GACTACCTAGTACTGGCAACGACTCAGTTAGGCCTTCAGCCACAAGCGATCATTCAACTATACGCCCGAAGATGGCAAATTGAGAATTACTTTAAAGTTGCCAAGCAATACTTGCGGCTCGACAAATCACAAGTTCAAAATTATGACGGGCTTTGTGGCCATTTAGCAATTGTCATGATGACTTATGACCTATTAGCTTGGCAGGAACGGCAAAATCAGGATGATCGCACCATTGGGGATTTATTCTTTATAATGAACGAAGCCATGCCAGATATTGAGTTGTCTCAAGCACTGGTATGGCTTCTAAATTCGTTAAAAACGATTATTAATCATGAAGTTTATGCAAGAAGAGCCCAAATTATTCAGATGATGAATCAGTTCTTCACATTTTTGCCGAAACGGTTAGTTTCGCTGTTAACAGCAAGCTAAATGGTTAAATTAATTAAAATATGCCCTGTGATACCAAGGGATCAGTCTGTCTTCATACTTTCAAGTTTCAG # Right flank : TATAGTTACAAAAAAGAGGTGCCCCATGGCAACCAAGCTAGACAAACAATTCACCCAAGACGTCCTAAACACAGTGGACTTAATCCCGTACGGGTGCGTCACAACCTATGGCCAGATTGCCCGCATGATTTGCCGCCCGCGCAACGCCCGCCTCGTTGGTAAGGCGCTGGGCAAATTTGGCGGGTGCGGTAAGCATCCCTGCCACCGGGTCGTCACTGCAAACGGTCGGTTAGTGCCTGGCTGGATTGACCAACGACCCATGCTAGAAGCGGAGGGGGTGCCGTTCAAAGATGCGACCCATGTCGACATTCAAAAATGTTTTTGGCGCGGCATCTAGTTCCCGTAACCTGGCTCCGTGGCCGATTCCACGCTATGCTGCCGTCCAGCGCCAGACCAAGAATGGCTACGTCCAGGTCAAATACACCTGGGTAGCGGCCGGCTGGCATTACGAGGCCCGCTGGCATAGTCGGGTCCCCACCGCCCAAATCATCACCTACCCA # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTTATCTAATAGAAGTGGAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.10] Score: 0/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //