Array 1 69551-70494 **** Predicted by CRISPRDetect 2.4 *** >NZ_SHJX01000008.1 Escherichia coli strain EC_102 NODE_8_length_224731_cov_43.932634, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 69551 29 100.0 32 ............................. CCAATACGGAGAACCTTCATCGGTAATGGGGT 69612 29 100.0 32 ............................. GAAGTTGCGCGCACTAAGAAAAACAGGTTCGA 69673 29 100.0 32 ............................. CTGAAATCAATCGCCGGTCGTCGCCACGTTAC 69734 29 100.0 32 ............................. TCGGGACGCTGCGCGATCTGCATAGCAACGCA 69795 29 100.0 32 ............................. GTATTTTTGCTGACGGATTCTCAGAGAGTTTC 69856 29 100.0 32 ............................. TTTCTATCTCCCAGTGGGAGAGAGATGACAGT 69917 29 100.0 32 ............................. GTTTTGGCGATATCACCTGATGCCTGCAATCC 69978 29 100.0 32 ............................. GGGTATCGCACTGCGGCAGATGTTCCGGGGCC 70039 29 100.0 32 ............................. CATGAATATGGACGATGAAAAAATAAGAGAGG 70100 29 100.0 32 ............................. TAAAAATCATCATGGAAAATCAACCCGGCGAC 70161 29 100.0 32 ............................. AGCGCGCGCGGGCTACTGCACTCGGTGATAAC 70222 29 100.0 32 ............................. GCGATCTCGCGGAATACACCGACGAGGCGGGC 70283 29 100.0 32 ............................. TAAGGCCGTCGCCGGATCAGCCTGGCTATGCC 70344 29 93.1 32 .A.C......................... TTCTTGCGGGTGTTGCAAATATTCTTCACGTA 70405 29 93.1 32 .A.C......................... GACGCCGCCGCCGCGAAGCCGTTTCCGATGTT 70466 29 89.7 0 .A.C........................A | ========== ====== ====== ====== ============================= ================================ ================== 16 29 98.5 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : TGGATGAACTACTGGCAACGCTGACCGATGATAAACCGCGAGTCATTGCACTGCAGCCGATTAGCCAAAAGGATGATGCCACACGTTTGTGCATTGAAACCTGCATTGCGCGTAATTGGCGTTTGTCGATGCAAACACATAAATATCTAAATATTGCCTGATTAAACATTTATAAGCGTTATAAATGGGTGGAACCTGTAAAGACTTCTACTCATTTATATTGTTTGTCGCCTCTGAAAACTCCTCCATTTTACCCATCCAGGGCTAATCATTAGCATTCTCTACAAATTCTGTGGCATTAATTTTTCGCTGGAGTGAAAATTATTGCGGTAAAGTTTGGTAGATTTTAGTTTGTATAGAGTTATTTTAAATATTTACCTTTTTAATCAATGGATTAAGTGCTCTTTAACATAATGGATGTGTTGTTTGTGTGATACTATAAAGTTGGTAGATTGTGACTGGCTTAAAAAATCATTAATTAATAATAGGTTATGTTTAGA # Right flank : ACCATATAACCCGTTATCTCTTTCTCAAGTTTTTATATTAGCAGTACTTGTAATAAGCAACATATCCACGTAACACCTCATGTTCAAAATAGTTCTCCATGCCAGAGAGGTTCACAATTATCGATACAAAAAATTAAATTTAATCAAAGTGTTATTTGTATGATTCTTAAATCGTTAAGAAATTTTAATCTATTATTTTTTTAATATTGAATTAATGCCTGTTAATTTTTTCTTTAGAATAACAGTATATTTTTTAAGCTTGTTATTCATTGGTTAAGTAATAAATCTGGAAGTTTGTCTTTGTTTTGAGGCTAATGAGTGGTTTTACATAACCGCCTCTATACGCTGTTGATGAATAGTTCTTATGAATAAAGATATCCAGTTCATACTTTAAGTGAAAATTGATAAAGTGCGATTCGTATTGTCTTTTATTCTAAAGACATCGAGTGTAGTTAATATTCCTTGTAAAAACAGGGATAAACCGAACTAGTTAAAGTTTT # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 96194-98052 **** Predicted by CRISPRDetect 2.4 *** >NZ_SHJX01000008.1 Escherichia coli strain EC_102 NODE_8_length_224731_cov_43.932634, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 96194 29 96.6 32 ............C................ CGGGTAAAGTCTCGGCTGAGCGCGTATTGATG 96255 29 96.6 32 ............C................ TGTTTCGGTTATCAGTAATCCGGTAAACGCCG 96316 29 93.1 32 ............C...............C ACAACATCAGGATTGCGATCCGTAGCGTTACC 96377 29 93.1 32 ............C...............T GTACCGTGGCAATAATTCTCTTGAGAGCATAA 96438 29 96.6 32 ............C................ GCGGACGGCAAAACAATCGGGAGTCTGGATAA 96499 29 96.6 32 ............C................ ATTTTTACTGAAATGACGGCTCGATTTACAGC 96560 29 96.6 32 ............C................ CAACGGAGGCCCAGGGCGTGCCGGTTTCGAAA 96621 29 96.6 32 ............C................ GTTAAAAACCATTTACGGAGATAATAAATAAC 96682 29 96.6 32 ............C................ TGAACACACTTCCAAAATTCAACGGTGACGCC 96743 29 100.0 32 ............................. CCGCTTCCCCGCTGGCTGTGTCTCGTCTCGTT 96804 29 100.0 32 ............................. ATTGCATTAAAGAGATCATGCGCGCCCAAAAT 96865 29 100.0 32 ............................. TCAAAAGATGAAATTTTGCAAATCAGGGCAGC 96926 29 100.0 32 ............................. TATTCGGTCACTCCCACAAATTTCCCAGGCCA 96987 29 100.0 32 ............................. AGGGCTGGTGGATTCGGGTAACTGGTTTGCTG 97048 29 100.0 32 ............................. TTGCGGGCGAAAGTGTCGATTCTGACACGATA 97109 29 100.0 32 ............................. GATTTACAAGAGGAACGATCATGACGGGTTTA 97170 29 100.0 32 ............................. GAAAATGCTCTTTGAAAATGCAATGCCCCGCG 97231 29 100.0 32 ............................. CAGACCCAGCGTGCCGCCCAGCGCCCGCGAGC 97292 29 100.0 32 ............................. CAGATACCTTGTTTTGTAACTGCGTTAATGTC 97353 29 100.0 32 ............................. CCACCTTTAAGCGCCATACCATTTCACATATG 97414 29 96.6 32 ............................C TAATTTTATGACAAGCGGTGGTGATGCTGAAC 97475 29 100.0 32 ............................. TTGCTCATTGCGAATCCCTCATCTGGCCTTAT 97536 29 100.0 32 ............................. GACATCATTTTCACAGCGACGCAAACAGCCGT 97597 29 100.0 32 ............................. CCAGTGGATTGAGACCACATACCAAATCACCG 97658 29 100.0 32 ............................. GAAGATATTTCTGGCGTTGGCCTGCGCGTGAC 97719 29 100.0 32 ............................. GCGGATCAGATAGAAAAACTATTCCGACAGTT 97780 29 100.0 32 ............................. TAAACGCACCTGGCGCGCCACTTTATCAACAA 97841 29 100.0 32 ............................. ATCATCCTTGCTGCGACGGACTACAACCGCCG 97902 29 100.0 32 ............................. GTCCAACGACATGAGGCGGTGGAACGATACGT 97963 29 96.6 32 ............C................ TCAGCAACAATTATTTTCGTCGCATCGTCATA 98024 29 96.6 0 ..................A.......... | ========== ====== ====== ====== ============================= ================================ ================== 31 29 98.5 32 GTGTTCCCCGCGTCAGCGGGGATAAACCG # Left flank : GTCCTTGCCGCAGGTGAAATTGAACCACCACAACCCGCGCCGGATATGTTACCGCCTGCCATCCCTGAACCTGAAACGCTGGGTGATAGTGGTCACCGGGGGCGCGGCGGATGAGCATGGTCGTGGTTGTTACAGAAAATGTCCCTCCGCGCTTACGTGGACGGCTCGCAATCTGGCTACTGGAAGTGCGTGCCGGTGTGTATGTTGGTGATACATCAAAACGTATTCGGGAGATGATCTGGCAGCAAATTACCCAACTGGCTGGTTGCGGAAATGTGGTGATGGCCTGGGCGACAAATACTGAGTCTGGTTTTGAGTTTCAGACCTGGGGCGAAAACAGACGTATTCCGGTGGATTTGGATGGGTTACGTTTGGTTTCTTTTCTTCCTTTTGATAATCAATAAGTTAGACGTTCTTTAAAAATAAGGAAATGTTTGAATTTAGTTGGTAGATTGTTGATGTGGAATAAATTTGTTTAAAAACAGATATGTATGCTTAGT # Right flank : GGACGCACTGGATGCGATGATGGATATCACTTGGAGTTCCCCGCCCCTGCGGTAGAACACCCAGCTCCCATTTTCAAACCCATCAAGACGCCTTCGCCAACTCCTTCACCAGAGGTAGCATTATCCGCATAACGTCACGGCAGCGACGTTCTATTCTTCCAGGAAGTGCCTTATCAATATGCTGTTGATTATCCAGTCTTACGTCATGCCAGCTATTTCCCGCAGGGAATGCGGCTGTTTTTGCGCGTTGCTGATAACCATCCTTATTCCCAAGATTCCAGTTAGTCGCTTCCACCGAAAGTACAGCAATGCCCGCTTTGTCGAATATTTCTGCGTCATTACAACACCCAGTGCCTTTCGGATAATTTTTATTCAAACCCGGATTGGTCGTTGCGGCTATTCCGTGACTGCGTGCAATTGCCAGCGCCCTGTCGCGCGTTAATTTCCTTACTGCTTCAGGGGTTTTTACACCGCTGTTGAAATACAATTTATCGCCAACA # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGTCAGCGGGGATAAACCG # Alternate repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGTCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [73.3-41.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0.41 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //