Array 1 83041-83619 **** Predicted by CRISPRDetect 2.4 *** >NZ_MOZW01000006.1 Escherichia coli strain 14.2-R3 NODE_6_length_169911_cov_25.7448, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 83041 29 100.0 32 ............................. ACAGTACCGGAGTTTGACGGTGCCAACGGCGG 83102 29 100.0 32 ............................. ACAATCAGGGAACGATTGTTGACACTGTAAAA 83163 29 100.0 32 ............................. GCGACCACGCAGAGCGGCGACAACCTGACGTT 83224 29 100.0 32 ............................. TCGGTTTGCGCGTATTGTTGTTCGGGGTCTAT 83285 29 100.0 33 ............................. TAGGTAAATCACAGCTATTTGATAAGGGCGTGT 83347 29 100.0 32 ............................. AGTCGAAATGAGGCGCGTGTTCTGGAGGATAT 83408 29 96.6 32 ............................T GTGTTTGCGGCATTAACGCTCACCAGCATTTC 83469 29 100.0 32 ............................. AATAGCAATAGTCCATAGATTTGCGAAAACAG 83530 29 100.0 32 ............................. GAGCCTGACGAGACTACTGAGGCCGTTCTGTC 83591 29 93.1 0 .A..........................A | ========== ====== ====== ====== ============================= ================================= ================== 10 29 99.0 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : TGGATGAACTACTGGCAACGCTGACCGATGATAAACCGCGAGTCATTGCACTGCAGCCGATTAGCCAAAAGGATGATGCCACACGTTTGTGCATTGAAACCTGCATTGCGCGTAATTGGCGTTTGTCGATGCAAACACATAAATATCTAAATATTGCCTGATTAAACATTTATAAGCGTTATAAATGGGTGGAACCTGTAAAGACTTCTACTCATTTATATTGTTTGTCGCCTCTGAAAACTCCTCCATTTTACCCATCCAGGGCTAATCATTAGCATTCTCTACAAATTCTGTGGCATTAATTTTTCGCTGGAGTGAAAATTATTGCGGTAAAGTTTGGTAGATTTTAGTTTGTATAGAGTTATTTTAAATATTTACCTTTTTAATCAATGGATTAAGTGCTCTTTAACATAATGGATGTGTTGTTTGTGTGATACTATAAAGTTGGTAGATTGTGACTGGCTTAAAAAATCATTAATTAATAATAGGTTATGTTTAGA # Right flank : ACCATATAACCCGTTATCTCTTTCTCAAGTTTTTATATTAGCAGTACTTGTAATAAGCAACATATCCACGTAACACCTCATGTTCAAAATAGTTCTCCATGCCAGAGAGGTTCACAATTATCGATACAAAAAATTAAATTTAATCAAAGTGTTATTTGTATGATTCTTAAATCGTTAAGAAATTTTAATCTATTATTTTTTTAATATTGAATTAATGCCTGTTAATTTTTTCTTTAGAATAACAGTATATTTTTTAAGCTTGTTATTCATTGGTTAAGTAATAAATCTGGAAGTTTGTCTTTGTTTTGAGGCTAATGAGTGGTTTTACATAACCGCCTCTATACGCTGTTGATGAATAGTTCTTATGAATAAAGATATCCAGTTCATACTTTAAGTGAAAATTGATAAAGTGCGATTCGTATTGTCTTTTATTCTAAAGACATCGAGTGTAGTTAATATTCCTTGTAAAAACAGGGATAAACCGAACTAGTTAAAGTTTT # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 109168-110416 **** Predicted by CRISPRDetect 2.4 *** >NZ_MOZW01000006.1 Escherichia coli strain 14.2-R3 NODE_6_length_169911_cov_25.7448, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 109168 29 100.0 32 ............................. TTACCGCTCTACGCCGCCCCGCCAGCGCTGGT 109229 29 100.0 32 ............................. AGCAGCCAGTGCCGGTAGTGCCTGGTGATGGT 109290 29 100.0 32 ............................. GCCGGGTTAAGAAGGTGTATGGATGGCCCGGA 109351 29 100.0 32 ............................. GGTTACGCCTGCACAGAGTACAATGCGTGGGG 109412 29 100.0 32 ............................. CGGTGATGCGCGGTATCGATCAGCATCCGGCT 109473 29 100.0 32 ............................. GCTCATTTCAAATGGTCAGGTCCGGTGGTTTT 109534 29 96.6 32 ............................C TGATCACATCATGTTTATTCGCGGTCGTATTG 109595 29 100.0 32 ............................. ATTTCATCAAAGCATTAAGGGATGGAATAAAG 109656 29 100.0 32 ............................. TCATGAATATGGGGAAAACGAACAATCTGTTT 109717 29 100.0 32 ............................. ATGACCATTGGTGAACGCATCCGCTTTCGCCG 109778 29 100.0 32 ............................. ATCGGACGATGGCGATCGCAATCGCGCGGGAA 109839 29 100.0 32 ............................. AGGACGAAACGACCGGAAAACTGGCGACGGGC 109900 29 100.0 32 ............................. CGTCCGCGGCTGCAACTGATGCCGGGGCTTAT 109961 29 100.0 32 ............................. AACCTTGTCGGGTCGCCCGTGCGTCATGATGA 110022 29 100.0 32 ............................. AGTTCCCACAAACCTGGGTGCATCTCGCGTTC 110083 29 100.0 32 ............................. ACTGCAAAGTTCTTCACGCTGGTTTTTATGCA 110144 29 100.0 32 ............................. CCAGCCGAAACAACGCCAGCAAAATCGACCGC 110205 29 100.0 32 ............................. GGATATAGAGCGGGTACTCGAGCGAAGCGGGG 110266 29 100.0 32 ............................. CCAGGACAGGCCGTGACGGTTGCCATTGAGTC 110327 29 100.0 32 ............................. TTTTTGTTCTCTTCAAAACGCCGAACAACCAA 110388 29 93.1 0 ............T.....A.......... | ========== ====== ====== ====== ============================= ================================ ================== 21 29 99.5 32 GAGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : CGTGCTTGCTGCTGGAGAAATACAACCGCCGGCCCCACCTGAAGATGCACAGCCTGTTGCCATTCCGCTTCCCGTTTCTCTGGGAGATGCCGGACATCGGAGTAGCTGAGATGAGTATGTTGGTCGTGGTCACTGAAAATGTACCTCCGCGCTTACGAGGCAGATTAGCCATCTGGTTGTTGGAGGTACGTGCAGGGGTATATGTAGGTGATGTATCCGCAAAAATTCGTGAAATGATCTGGGAACAAATAGCTGGACTGGCGGAAGAAGGCAATGTAGTGATGGCATGGGCAACGAATACGGAATCGGGATTTGAGTTCCAGACATTTGGGGTAAACAGGCGTACCCCGGTAGATTTGGATGGTTTAAGGTTGGTATCTTTTTTACCTGTTTGAAAACAAAGAATTAGCTGATCTTTAATAATAAGGAAATGTTACATTAAGGTTGGTGGGTTGTTTTTATGGGAAAAAATGCTTTAAGAACAAATGTATACTTTTAGA # Right flank : GGACGCACTGGATGCGATGATGGATATCACTTGGAGTTCCCCGCCCCTGCGGTAGAACTCCCAACTCCCATTTTCATACCCATCAAGACGCCTTCGCCAGCTCCTTCACCAGCGGTAGCATTATCCGCATAACATCACGGCAGCGACGTTCTATTCTTCCTGGAAGTGCCTTATCAATATGTTGTTGATTATCCAGTCTTACGTCATGCCAGCTATTTCCCGCAGGGAATGCAGCTGTTTTTGCGCGTTGCTGATAACCATCCTTATTCCCAAGATTCCAATTTGTTGCTTCTACCGAAAGTACGGCAATACCGGCTTTGTCGAAAACTTCGGCGTCATTACAACAGCCAGTACCCTTCGGATAATTTTTATTCAAACCCGGATTGGTCGTTGCGGCAATTCCATGACTACGCGCAATTGCCAGTGCCCTGTCGCGCGTTAATTTCCTTACTGCTTCAGGGGTTTTTACACCACTGTTGAAATACAATTTATCGCCAACA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GAGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GAGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [70.0-41.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //