Array 1 123057-121899 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_VCYE01000001.1 Pediococcus acidilactici strain C5 contig00001, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
    123056	    36	 100.0	    30	....................................	TCGACCTTATCGGACGTGTTCGTCCCATCT	
    122990	    36	 100.0	    30	....................................	TAAAAATTACTCTTTTGGCAGTCCGTACGA	
    122924	    36	 100.0	    30	....................................	TCTGTTTTGCGCGATATGCCAAAAAACTCC	
    122858	    36	 100.0	    30	....................................	GGTCTCCCTTAATAATGCTATTACTATCAT	
    122792	    36	 100.0	    30	....................................	AACGAATTATTAGAATTAGAAGAGGTTAAA	
    122726	    36	 100.0	    30	....................................	TTGATATCCATTATTAATTTCCTCCTTTAA	
    122660	    36	 100.0	    30	....................................	TACCAAAAATTAGAGGTATGGACGAACTTC	
    122594	    36	 100.0	    30	....................................	ACCATAACATTCACAACAGCAATCTGTCGG	
    122528	    36	 100.0	    30	....................................	AGGCTAAAGATGAAGAGATTGACCTTCAAG	
    122462	    36	 100.0	    30	....................................	AAATCATAATTGGCACATTACAGTTGCAGG	
    122396	    36	 100.0	    30	....................................	TATAGTTGATATTTCTGGTGACACCAGTTA	
    122330	    36	 100.0	    30	....................................	AGTGGGTCACTGGGAAGGAGCAGATCTTAT	
    122264	    36	 100.0	    30	....................................	TCGCCTAAACTAGTTTAAGAACATATACGG	
    122198	    36	 100.0	    30	....................................	ACATAAGATGATTAGCTTGCAATTTCTTAA	
    122132	    36	 100.0	    30	....................................	ACGATTTGTTTTTAATGGAACTGCAACGGG	
    122066	    36	 100.0	    30	....................................	CGTTCTACGCTGTTCATAAGTACCATTTGT	
    122000	    36	  97.2	    30	..............................G.....	AAAATGCTGTGGCTTATGAACTCGATGACA	
    121934	    36	  77.8	     0	......A.......CC............C...TCAA	|                             	
==========	======	======	======	====================================	==============================	==================
        18	    36	  98.6	    30	GTTTCAGAAGGATGTTAAATCAATAAGGTTAAGATC	                              	       

# Left flank :   CCAAGATTTAGTTATTCAAAAATATTTAACTAAGATTGAACGGGTTTTTGCCGAAGGGTTGGTGGATGAGCAGCGTAACCAAATTCACGATCAAGTTAACCAGCTATTTAATACGGTTGCTGAACAATTATTTATGCTAGATTTACCGATTAGCGTTAATTATGATTTTGATTTGAAAAAGTTATTGAAGTATTGTGGAGTGCACTTTGATCTGCTAAGCGTGGGTAACCCGTATGGTATAATTGAAGCGATTTTGAAGATTCACGAGGAGTGCGCGATTAATTCGTGTGTCGTGTTAACTAATGTTGCACATTATTTGACAGCGACCCAAATTGAAGAGCTTACCCAGCTAGTAAGTCAAACGAATCAAGCACTCTTACTAATCGAATTCACAGAAATAGGTAATCAGGAGGCCTATGGAAATAGCGAATTCTACTACATTGACAATGACTTTGTTGATTGGCATCAGTAATTGATGAAATTTTAGTTAGAAAATAACG
# Right flank :  AAATAGACATGATTATTTGTTTTAATATTGCAATCCTTAAATCTCCCCCAGCAAAGCAACGAGCTACTTGATAAAGTGTGACAGCTTTTAAGTAGCTTGTTGTTTTTTAGTAATAAAAAACAGCCCAACCGAATCCCAATCCAGTCAGACTGTCTTAAATTTCCTACATCACCAGCGGCAATACCACCAGGCCGTTCATCAAAATGTGTGCGATCATTGAAGTTTGGATGCGTCCCGTTTTATGGTACAGCCAGCAAAATAGCAGCCCAATCGCGGCGTATAAAAAGATGTGGCTGTCGTTATGCATAAAGGCGAACGCTAAGCTGGAAATGATCGCCATGATCGTCAAGCCTAAGTTCGAGCGCATCCCGAACAGCGTGCTTAAATTGCCAAACAAAACTTTTCGAAAAACTAACTCTTCCATAATGGGCGCCCCAACGGTGATTGCCAACACAAAAAACGGGTTGATTTTCGCTAGGGTAACTAACGTAGCCGTGTTC

# Questionable array : NO	 Score: 6.19
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTCAGAAGGATGTTAAATCAATAAGGTTAAGATC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:69.44%AT]
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  R [0.00,-1.10] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [9-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [68.3-71.7]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,0.78   Confidence: HIGH] 

# Array family : NA
//