Array 1 326968-324754 **** Predicted by CRISPRDetect 2.4 *** >NZ_LQRN01000011.1 Streptococcus parauberis strain T1 ASN87_contig000011, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 326967 36 100.0 30 .................................... CAAACTAATTGCAGACATCTGTAAGCGTTA 326901 36 100.0 30 .................................... CGTTGAATTGATTGAGAATGAAGAACGCCA 326835 36 100.0 30 .................................... TTGACAGTTGTGCCATTCATGTTATCTACA 326769 36 100.0 30 .................................... GAGCTAGCTTTTTAGCTTCATCTTCTTTTT 326703 36 100.0 30 .................................... TTGATGCAACATATGAGAGCATGTTGAGAA 326637 36 100.0 30 .................................... TTCCAATTTGTGAGCCTTTAGAAGCGTAGT 326571 36 100.0 30 .................................... GGGACAAGCAGTTGATTTATATAAAGAATA 326505 36 100.0 30 .................................... TAAGTGGGAGTACACACTCAAGGTTATGTT 326439 36 100.0 30 .................................... ATAGTTATGTTGAAGAGATGTCTTGCGAGT 326373 36 100.0 30 .................................... GGGACAAGCAGTTGATTTATATAAAGAATA 326307 36 100.0 30 .................................... TAAGTGGGAGTACACACTCAAGGTTATGTT 326241 36 100.0 30 .................................... ATAGTTATGTTGAAGAGATGTCTTGCGAGT 326175 36 100.0 30 .................................... TTGGGCTAACTGCTAGTAAAGAAGTCGTAT 326109 36 100.0 30 .................................... GGAGATTTAGCAGGTGTGCAGGCAGCATAT 326043 36 100.0 30 .................................... GCGACCTTCTGGAATAAAGCTAGTTCCATT 325977 36 100.0 30 .................................... ATTCAAGTGATCACCACCTTTTCTATTATA 325911 36 100.0 30 .................................... ACATCGAAACTATCGACGATGAAACAGATG 325845 36 100.0 30 .................................... AGTTTGGCGACTCTGAGCATGAGATTATCC 325779 36 100.0 30 .................................... TGGTTTTGTTGACTCGTAAATAGTACCAAT 325713 36 100.0 30 .................................... TAAAAGGTACATCATAAAATATTTATCTTC 325647 36 100.0 30 .................................... AACATGACCCTGAAAAATGGCGAGAGTATG 325581 36 100.0 30 .................................... CGTTAAGAAAGGAGTTGTGTCCATTTTATT 325515 36 100.0 30 .................................... CAGTAAAACAATAGTTAAAACATTTAGAGG 325449 36 100.0 30 .................................... TCTCTCTTTGGCTTACGGATAAACTGATCA 325383 36 100.0 30 .................................... GCAGGAACTGGAAGCATTATGATTCAAACG 325317 36 100.0 30 .................................... AACGATTGAGACTTACACGGCTAAGATAGT 325251 36 100.0 30 .................................... TACATTATCAAATTCAGCAGACACTCTTAC 325185 36 100.0 30 .................................... AGTAACGATAATGGTTATAACCTATACGTT 325119 36 100.0 30 .................................... TCAAATTGTAGATACTCAGGAACACTTCTT 325053 36 97.2 30 ........A........................... AGGTCAATTGCAAACAACAAGGGCTTTGTT 324987 36 100.0 30 .................................... ATATCATGGAAATTGATGAAGATGAAGAGC 324921 36 100.0 30 .................................... GCCAGATAAATATTATCTAGGCTTTACCCA 324855 36 97.2 30 .............................A...... GTAACAGCACTACGAGCTACTTTAGGCGCT 324789 36 97.2 0 ..................................T. | ========== ====== ====== ====== ==================================== ============================== ================== 34 36 99.8 30 GTTTTAGAGCTATGTTATTTTGAATGATTCCAAAAC # Left flank : AAAAACCAGAAGTTAAATCAATGGTCGATAAACTTGCTGCGACTATTACAGAACTAATTGCTTTTGAATGTTTGGAAAGTGAACTTGATTTGGAATATGATGAAATAACAGTACTCGAATTAATCAAAGCATTGGGTGTCAAATTTGAAACACAAAGTGACACAATTTTTGAAAAATGTCTTGAAATTCTACAGGTGTATAAATACTTAAACAAGAAAAAATTGCTCGTTTTTATCAATACCGGTTCCTACTTGAGCAAGGAAGAAGTAGAACAATTGTTTGAATACATCTCATTGTCGAATCAATCTGTTTTATTTTTAGAACCACGGAAATTATATGATTTTCCTCAATATATTTTAGATCAAGATTTCTTTCTTATGTCTCCTAAAGTGGTATAATAGTAGTAGAATGGATCCCCGAAATAGGTATCTTTCAAAGTTGAAGTCCTGCTAAGATGAGTAGCGCGATTACGAAATCTTTTGGAAAAATTATTCCACGAG # Right flank : CATTATGTTAATAAGTTTTTGTAGTCTTAGATTTGTTGTTTATTAAAGTCCTTTTTGCCTATTTTATGAGGTATCCACTTGCTTGATCTGCTTATCCAAATGATAGTCATTGCTTTTTGTATTGTCTTTTTCCTTGGGACGATTCTTTTTGTCATTTTATTGGTTGCGGATCCTTTGGGAAATCATTAAATTATCACTCAAGTGAAAGCTATTATCATAAAGGCAATTTTTTATGAAAATGGCTTTTTTGTATAGTTTTGGTGAATTTTTGTCATAATATCCAAACTAGGATTTTTTTTGAATATTTATTATGTTTTTTGGCTAGAATATAAATTTAAAAAGCACTATTTTCATTAATATTCTTTGCAAAATTTCTGTAAAAAGCTTGTAAAATAAGGGCTTATGGTTAATTATCAAATGATTCTAGCTTTTTCTTTGCAAGCCCTTACATATGTGCTATGATGAGAAAAAATAAGAGGAGATCTTCTAATGGAAAAAAC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTATGTTATTTTGAATGATTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: R [matched GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC with 95% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,4.91 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //