Array 1 1955811-1955102 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP012069.2 Olsenella sp. oral taxon 807 strain F0089 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ====================================== ================== 1955810 31 96.8 36 ...A........................... ACGGCTAGGATACATAACATGACAAGCGCAGAGGGT 1955743 31 100.0 37 ............................... GAGATTGTGTGCTCCTACGATACGGAGACTACAAAGT 1955675 31 100.0 36 ............................... TTGACCGATAAAAGCTCTGGTAGCTCCTCCAGCCGT 1955608 31 100.0 37 ............................... CGAGTGATCTCGTGATGGGCGATGAGCTAATCGCGGT 1955540 31 100.0 38 ............................... TCGCGCTAGCGGTGCGCGTGCTGCCGGACGATCCGGGT 1955471 31 100.0 37 ............................... AGTCAACTCCCAATGGCCAACAAGTGGCAGGTCAAGT 1955403 31 100.0 37 ............................... GAGGTCGCGCATCCCGAGATAGACGATACTGAGAGGT 1955335 31 100.0 38 ............................... GAAGCTAGCTACTGCAACATGACTACCTCGTACCAGGT 1955266 31 100.0 36 ............................... TCGGGATCCGTCTGGAGCGCAGGTATCTCGGCATGT 1955199 31 96.8 36 ...............A............... CTCAGCTGTAGCTCACAGGCGGCGCCACCTGGCCGT 1955132 31 74.2 0 .........CA............GGAAG.T. | ========== ====== ====== ====== =============================== ====================================== ================== 11 31 97.1 37 CGCGCCCCGTGCGGGGCGCGTGGATTGAAAC # Left flank : GCTGGTGCCTGTGGCAGAACGAGGAGTACATGTAGGGTGTCCTACCGGCGGCGACGGCGCGCTCGGCGTACTCGCTCCACAGCAGGGTCATCGTCACGCCCCTGCGGCCCATCTCCCTCCGGGCCCACTCGTGGTCGATCTCCGCCTTGCTGGCGTCGGAGCGGTCCTGAGGCGGGCAGGGCCTGGCACGGATGGCCTCGTCCCCCATCTCGTCGGACAGCGGCCACTCGAGGCGCCGCGTCGCCGCCTTACGCTGCACCTCCTGCACCGTCGTCTTCGAGCATCCCACGGAGCCGGCTATGCTCCGCTGGCTTATCCCCAGGGCCGTGAGCCTGAGGATCTCCCCGTGCCTGATCATGTCTTCCCCTCTCTCGGGAGACGGGGCGACCCAGTGCGCCCCACTGGGTCAATCATGGTCGGTGATGCGTGCAGCGGCGGTCGGCGGAGCCTGGAACTGCGGTCAGTGGGAGATGGAATGCCGGTCGCTAGGGCCTGCTGTA # Right flank : CCGATCTGACGACGCCTTTGTTTATGTCCCTATACTGCTCCCGCGCAGGGATGATTCCGACGTTATGCAGGACCTGCAGGAAGGAGACGGACACAGGCCTCGATTCCTCACCCAAGTGTGTACTCGTCTCATTGCTCATTGTGCCTCAACCGAGGCAGCTTCAACCCGTCTCTGCCCGCTACGCCGCCACGGTCCCCGCCTGTGGCGGCGTAGCGGGGGAATGCCCCTGTCGAAATGACCTGGACTTCCCCTGGTTGTGGTATGCTCTTCGTAAAGTCAGCTGGGGCCCGGTTAATTCAGGGTTACTCGGCTGGCTTCCCTCTTACGTAATGTCTGATCCTGCCGTCGCGAGACACGATGATCATCTCTCTGACTTTCGGAAACTCGTCACCTTGGTCCTCGAGCCACGAGTACATCTCATCGAACGACAGGCCGCTCTCCACGTTCGAGATGAGGACCCTGTCGCATTGGGGTTGCATGTTCCCTGTCCCGGAGGCCTT # Questionable array : NO Score: 9.11 # Score Detail : 1:0, 2:3, 3:3, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CGCGCCCCGTGCGGGGCGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CGCGCCCCGCACGGGGCGCGTGGATTGAAAC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.30,-10.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [9-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [45.0-33.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,9.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 1963789-1961131 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP012069.2 Olsenella sp. oral taxon 807 strain F0089 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ======================================= ================== 1963788 31 100.0 39 ............................... GTGAAGGACAGTGAGGGTAAAAGCGCAGGTAGATGGGGT 1963718 31 100.0 37 ............................... CGGCCCGTCGCACCGAATCCAGCCGTCAGCAGCTTGT 1963650 31 100.0 37 ............................... GCAGAGGGTCAAGTTAAGCAATCGCCGGTGCTTCGGT 1963582 31 100.0 36 ............................... AGCCTTGAGAACGACAAGGACAAAAGAGTCACCCGT 1963515 31 100.0 37 ............................... CGGCCCGTCGCACCGAATCCAGCCGTCAGCAGCTTGT 1963447 31 100.0 35 ............................... GGGAACGCGCGCGCTCTGAGTCTCGCCGGCCATGT 1963381 31 100.0 36 ............................... TTGCATCAGTCTGGCCTCCGGATCCGATTAGTCAGT 1963314 31 100.0 36 ............................... TCGCGATAGATGAGGCACACATCATCTATGGCGCGT 1963247 31 100.0 35 ............................... AAAGGTTTACGGCTCGTGCTGGGCGCTGAGATGGT 1963181 31 100.0 36 ............................... TGCCTGTGTCATGGTGGACCAGTCGCGTATCCCTGT 1963114 31 100.0 36 ............................... AGTTAATCCCGCTAGTGATTGGCGCTGTGCGCGCGT 1963047 31 100.0 38 ............................... AGGGTATCCATTAGAGTTGTTAAAATAGAGCCAACCGT 1962978 31 100.0 36 ............................... TTACTACGTTGATGGGTGTACTTAATTCCATGGGGT 1962911 31 100.0 36 ............................... CGCTTGGCCTTGCCCTTGTTGCTCTTGACCGGCCGT 1962844 31 100.0 36 ............................... AGCTGGTCTGACTGTGGGGTGACGTGATGCTTGCGT 1962777 31 100.0 36 ............................... TTGTCATCGACGAAGCCCAGCTCATGCTCAACGCGT 1962710 31 100.0 38 ............................... TTGGCCCTATCATCAGTGGTCTTGCGCTTGGGCATCGT 1962641 31 100.0 37 ............................... TTGATCCTAAGAAGCCACATACGCATATCTTGCTGGT 1962573 31 100.0 36 ............................... CGAGAGAGGGTGAGCGTGATGTACCAGAGCTGCTGT 1962506 31 100.0 37 ............................... CGAATGATAGGCTTACTCCGCAACTGCTTGAAGACGT 1962438 31 100.0 37 ............................... CAACTGGTCCATGCCAACAAGACCGAGGTCACGGCGT 1962370 31 100.0 36 ............................... TGCTCGGCTGGGGTAGCGGTATGGTGATGGGGTGGT 1962303 31 100.0 36 ............................... TGCTCGCGATAGACGAGGCACATATCATCTACGGGT 1962236 31 100.0 36 ............................... AGGGACTGCACGAGGAGCAGCACGGTCCAGCCCTGT 1962169 31 100.0 37 ............................... ATCTACTGTCCTACCTCTCTCGTAAGTCTCTTGAGGT 1962101 31 100.0 36 ............................... TGCCTTGGTAAAAACATCAGGTGCCATAACCATAGT 1962034 31 100.0 36 ............................... GCGCGACGCACGGCTCCGGTCCGAGTACGTCATCGT 1961967 31 100.0 36 ............................... GTGCCGTGGTACAATTTATGTGTGAGCAAGGGAGGT 1961900 31 100.0 37 ............................... CTTGCCCATCCGGTCGTACTTTGCGTCCATCGCTAGT 1961832 31 100.0 35 ............................... CTGTCCTTAGCCCGCGATAACTTCGTGCCGGCAGT 1961766 31 100.0 36 ............................... AATAGCTATGAGCTTATCCCGCTTTGCATTGGTGGT 1961699 31 100.0 36 ............................... CGAGCCAAGGCGCGCATCTCGCGAATCCTGACGCGT 1961632 31 100.0 36 ............................... CCATCTGCGTAACGAGGTCGATTAGTTTCTGAACGT 1961565 31 100.0 36 ............................... TTAACCGACAGCAGCTCGGGAAGCTCCTTTAACCGT 1961498 31 100.0 36 ............................... TTGGGTCCGCTCGCGTCCTAAGGGTACGTCGGTCGT 1961431 31 100.0 35 ............................... GGTTAAGCTTGGGTTTGCTCTCAGGGTCGATTCGT 1961365 31 100.0 36 ............................... GCTCTGCTGGTATTACGATATAGGGAGGTAGACGGT 1961298 31 100.0 38 ............................... AACCATCAGGAGATAAAATGCCATCACGAAGCTACAGT 1961229 31 100.0 37 ............................... CATGGAACTATCAGAGAACACATCCTGGATGCAAAGT 1961161 31 100.0 0 ............................... | ========== ====== ====== ====== =============================== ======================================= ================== 40 31 100.0 36 CGCGCCCCGTGCGGGGCGCGTGGATTGAAAC # Left flank : GATCTTAATGATTACCCCGCGTTTCTCTGGAGGTAGCGGTGTATGTTCTGGTGACATATGATGTCGCAAGCGGAGACGTGGGAGGTCCGCGTCGTCTTCGCCGGGTTGCAAAGATCTGCACGCAGTATGGTCAGCGAGTGCAGTACTCGGTATTTGAATGCCTGGTGGACCCTGGCCAGTATGAAAGTATGAAGCATGAGCTCGCTAGGATCATCGATGAGGGACGGGATAGTCTACGTTTCTATAACTTAGGGAAAAACTGGAAGAACCGCGTTGAGCATATTGGTGCAAAAGACAGCTATGACCCGGAAGATCTGTTATGCATCTAGAGGACTTTTTGCCTGCGCGAACCCTTAGCGGTGGCTAAGACCCTGTAGGTTCGCGCAAAACGAGACACGAAAAGTGGCGGTTTTCTGGGATCGGTAAGTTCCTCTGTCGTCATTTTCTTCGATAGTGTATATAAAATTATATAAATTCATTGATACGTATGAATTGACGGT # Right flank : CACGAGCTGAATGACTGCACAGACCTGGGATACATGGTCGCGCCCCGTGTGCGTACAGCAGGCTACAAGGACCATGATTCCACCTTCTGCCGACCACGTTCCAAGCCCCACCGACCAGTTATGCACGGTGCGCCGACCACCCGCGCACCGTGCCAATCGCTAGCTCAGGACCACGGTCAGCCCTCTTCGGCCATGCGCTTGCGCATGGACTCCCTCCCCTCGATGTGTATCATCCTGGAGTTGTACACGACGCGGTCAAATGCTAAGTCGTACGTTATGCGAAGTCCGGGCAGGAGGGCCCGCCCGGGCAGGTCCAACGCTCCCGCCAACTTCGCATAACGTGACGGTCTACAGCAGGTTCCTCAGCCATTCCATGATCGCGGACTTATCCTCCTCCCCATACGCGCTCCCCATTATCAGATTGGCGGCGGCTTTCTCCACAGCCTTCTGCCTTGACTTCGAGCTGATCTTGGCGTAGATCTCGGTCGTCTTGACAGAGG # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CGCGCCCCGTGCGGGGCGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CGCGCCCCGCACGGGGCGCGTGGATTGAAAC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.30,-10.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [40.0-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.64 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //