Array 1 1093487-1098234 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP084318.1 Leeuwenhoekiella palythoae strain F5 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================================== ============================== ================== 1093487 46 100.0 29 .............................................. TTGATTGCCGATAAGCTGCTTGGGATTCC 1093562 46 100.0 30 .............................................. GAACTTTCGATGCGCATTTGCATAATTCAA 1093638 46 100.0 30 .............................................. TGCAATCATCTTCTTGATGGTCTTAGCCTC 1093714 46 100.0 29 .............................................. ACCTTTTATTGTAAAGTGAATTGATACAT 1093789 46 100.0 30 .............................................. AAATACAACGCGCTTTGGCTGATTTTGAAT 1093865 46 100.0 29 .............................................. GGATGCGTAAAAATATCATTTTGAGAGAC 1093940 46 100.0 30 .............................................. ACCCGAATACCGGAGAATACAAAATACAAT 1094016 46 100.0 30 .............................................. GACAGGCGTTAACGCTTGCTGTGGTAGTTG 1094092 46 100.0 30 .............................................. AAGAATTTATAACGGATGCCGGCACGGCTT 1094168 46 100.0 30 .............................................. TAGTATCTAGCATATACGCACGCCTTTAGA 1094244 46 100.0 30 .............................................. TAAGACAATCGGCTCTTCTTGTATTAGCTT 1094320 46 100.0 30 .............................................. TTGGAATATTAACAGCCGGAAACGGTACGG 1094396 46 100.0 30 .............................................. AACCTGCCGCGGTATCAGTAGCGGTGACTT 1094472 46 100.0 30 .............................................. GCATCGGTGCAAATACCTTGAGCCAATCCC 1094548 46 100.0 30 .............................................. GACAAAAGCCCGAAACGATTGAGTTTATCA 1094624 46 100.0 30 .............................................. TCGTGGCTACTCGAAATTGAATAATCGGTT 1094700 46 100.0 30 .............................................. TGGATTTTAACAATATTAATATTGTAAAAT 1094776 46 100.0 30 .............................................. AAGCAACGGTTATACCAGTCTTCAAAGTAA 1094852 46 100.0 29 .............................................. TAGAACTTCGCATTCACCAGTGCGCGTAT 1094927 46 100.0 30 .............................................. ACGACTTCATCGCTTGTCGCTTTGGTTTCA 1095003 46 100.0 30 .............................................. GCAACTGAGGCTGAAATTAGAGCCGATTTA 1095079 46 100.0 29 .............................................. AGTGTTATTATTCTCAAAACCAGACAAAT 1095154 46 100.0 30 .............................................. AAGAATTTATAGATGATGCCGGAACGGCTT 1095230 46 100.0 29 .............................................. TTATCTTTTTTAAATTGAACGTTATATTT 1095305 46 100.0 30 .............................................. TGAGGCTAACAATCTTACCAGACACTTACG 1095381 46 100.0 30 .............................................. ACAACTACCGTAAAAAGCCTTTAGTGTCTC 1095457 46 100.0 30 .............................................. GTGAGAATATCAAAATAGGCTTCTTCCATA 1095533 46 100.0 30 .............................................. GTAGTTTTCGTGATTTTGTTACCAATCTTG 1095609 46 100.0 30 .............................................. TGGTCATTCTTGTGGTTTTGGTTTTGGCTG 1095685 46 100.0 30 .............................................. CGGAGTTACTTTTTTAACCTGGTACTACTT 1095761 46 100.0 30 .............................................. CTACAAATATCAAACGATATGCCAACAAGC 1095837 46 100.0 30 .............................................. GATTACACCTTTAATAAAATCTTTTCATTT 1095913 46 100.0 30 .............................................. GGCGGTTTAAACACCGCAAAACCACGTAAA 1095989 46 100.0 30 .............................................. TGATATTTTATCATAGTATCGCTCTTTACT 1096065 46 100.0 30 .............................................. GGTAGTTCTCTATTGCAAATATAGCGATAT 1096141 46 100.0 30 .............................................. TGTAAATAATCTTTACGTTGATTAGTAATT 1096217 46 100.0 29 .............................................. TCAGCCCTGTCTTGAATTTCTTTTGTTAA 1096292 46 100.0 30 .............................................. ATAATAAAAGAGTTTATTTGGTATGAGTAG 1096368 46 100.0 30 .............................................. AAGACGTTCTCGAGTCTGACGGTATTGAAG 1096444 46 100.0 30 .............................................. AATAAATCAAATGACTGAAACTAAGTTACA 1096520 46 100.0 30 .............................................. ACCACTACCATATAAAGAAGCGGGTATAGC 1096596 46 100.0 30 .............................................. GGCAAAAGTAAATAGTCAACTGCAAGATTC 1096672 46 100.0 30 .............................................. ACAAAGTGGTCAAGTTCGTTGCGTTCATAC 1096748 46 100.0 30 .............................................. TTCACCGCCAGGCGCTCACCATTTTTATAG 1096824 46 100.0 30 .............................................. ATGATCTACTAACCGAACGTGAAGCAAGCA 1096900 46 100.0 30 .............................................. GTAGAATATCGCTTCTCCCCGTTTTTCTCG 1096976 46 100.0 30 .............................................. CCGGAATAGGTTCCCAAGGCAAAATTTGCA 1097052 46 100.0 30 .............................................. GGCACCCACAAATTTTTTGACAGTATCTCT 1097128 46 100.0 30 .............................................. TTTCCTGCTTTACCAGTTGCGCTATCAAAA 1097204 46 100.0 30 .............................................. GGTTGCATCAATCGATACGTAATCGTAACG 1097280 46 100.0 30 .............................................. ACTTTACAGACGCGCAACTGTCACAGTTTT 1097356 46 100.0 30 .............................................. GAGGTGAAGGCGGTGAAGACAAGCACTTCA 1097432 46 100.0 30 .............................................. TACTAACCAACATATTATGAACGGTGGTAA 1097508 46 100.0 29 .............................................. CAATTCTCCAACCTTGAATAGAATTAAAA 1097583 46 100.0 30 .............................................. TAGATTAATCACTACAGGAATATTGCTCAC 1097659 46 100.0 30 .............................................. GAGAGAATATTAAAATAGGTTTCTTCCATA 1097735 46 100.0 29 .............................................. GAAAGTCACTATAAAAAGTTAGGGATGCA 1097810 46 100.0 30 .............................................. TTGGCATCTTTCGCTAAGATTTTCTTATCG 1097886 46 100.0 30 .............................................. CCGGTACTTCAATTACCGTTTCTTTGACGC 1097962 46 100.0 30 .............................................. GTGATGTCACCGCCTAAATAAGTTGCCATT 1098038 46 100.0 29 .............................................. ACTGAATGTTCAGAGCAAAGAACATACTC 1098113 46 100.0 30 .............................................. CCGACATTCTCCCGAATTTGCACAAATCAC 1098189 45 76.1 0 ..........A............AG.A...-...TA..GAA...T. | A [1098211] ========== ====== ====== ====== ============================================== ============================== ================== 63 46 99.6 30 CCTGTGAATCCTCACTAAAATTAGTATTCTGAAAGCAATTCACAAC # Left flank : TATCCTGAATATACAGTCAACAGATCGCTTGAATGATGCAGGAAAGCAATTTTTCAAGACTTAACCAATACCGTTCTATGTGGGTACTTGTATTTTTTGATTTACCAACAGAAACGCGCACCGAACGTAAGGTCGCAGCACGGTTTAGGAAAAACTTACTCGATGATGGGTTTGCGATGTTTCAGTTCAGTATTTATATGCGTTTTTGCGCAAGTCGTGAAAATGCCAGCGTACACATAAAGCGCACCAAAAACAACTTACCAAAAAAAGGAAAAGTCTGTGTTATGCAGATCACCGATAAACAATTTGGCATGATGGAACTTTTTCACGGTCAAAAAGAAGTAGAACCCGAACAACCTTCACAGCAACTCGAGCTTTTTTAAAAACCCTAGAAATTAAATTGTCAGGTCGAGCGCAGTCGAGACCTTTTTTCTACCTCACTTTTTTAAATCCTAAATTAACACATAAAAAACAGGATACCAGCTCTTTAGAACGGGTAT # Right flank : CAACTCGTTATAGTTTTTAAATTGGCTAGCGTCTACAAGTCTTTACTAATTTCAGTTTCACTGTACAGATATCTATAAAATCAAAGAGAGGAATAATTGTATTTTTAAATTTCTAGCCAAAATAGATCATTGATGAAAAAATATATACTTTTAGTTTTACTCTTTTGTTCTTTCGCATCCTTTTCTCAACAAAAAGAACTTATCCTTGCTTCCTGGAACATTCAAGATTTTGGAAAAACCAAAAACACAGAAGAACTTGAGCAGATTGCAGAAATACTCAGAGATACAGACATAATTGCTATTCAAGAGGTTGTTGCAGGTTATGGGGGAGCTCAGGCAGTAGCTAAGCTATCAGACATTCTAAACCGCAAAGGGGCTAAATGGGATTACGTAATAAGTGACCCTACGAATAGTTCGAAGTACGTAACTGAGCGCTATGCGTTCATCTGGAAAACTTCTAATATTAAAATTAAGAATAGGGGTAAGCTTATCGCTGCTCT # Questionable array : NO Score: 3.24 # Score Detail : 1:0, 2:0, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCTGTGAATCCTCACTAAAATTAGTATTCTGAAAGCAATTCACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:65.22%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.30,-2.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-12] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.37 Confidence: LOW] # Array family : NA //