Array 1 56-264 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_FWTO01000204.1 Streptococcus pneumoniae isolate Hermans-1638, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence              	Spacer_Sequence                	Insertion/Deletion
==========	======	======	======	=============================	===============================	==================
        56	    29	 100.0	    31	.............................	CTCATGGTACTACCTAAACAGCAATGGCGCT	
       116	    29	 100.0	    31	.............................	TTCATGGTACTATCTAAACGCTAATGGTTCA	
       176	    29	  93.1	    31	.....A...............T.......	TTCATGGTACTACCTAAACGCTAATGGTGAT	
       236	    29	 100.0	     0	.............................	|                              	
==========	======	======	======	=============================	===============================	==================
         4	    29	  98.3	    31	ATGGCGACAGGATGGCTCCAAAACAATGG	                               	       

# Left flank :   AACAGGCTGGAAACAAGAAAACGGTATGTGGTACTTCTACAATACTGATGGTTCAA
# Right flank :  C

# Questionable array : NO	 Score: 2.57
# 	Score Detail : 1:0, 2:0, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:0.4, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     ATGGCGACAGGATGGCTCCAAAACAATGG
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     F [10,4] Score: 0.37/0.37
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  R [-1.90,-2.50] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-2] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: F [55.0-0.0]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [1.05,0.37   Confidence: MEDIUM] 

# Array family : NA
//