Array 1 29767-33092 **** Predicted by CRISPRDetect 2.4 *** >NZ_BMOF01000024.1 Calditerricola satsumensis strain JCM 14719 sequence024, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ========================================= ================== 29767 30 100.0 37 .............................. CTGTTTTCGAATCAAGCCGCGAGAACCATGCCTCTTG 29834 30 100.0 37 .............................. TGTCTTTGGTACTGGCCGCCTCTTTCGCGATGATATT 29901 30 100.0 37 .............................. ATCTTCTTCGCGTCAGCTAACGCCTGCTCCGTGGCGC 29968 30 100.0 39 .............................. ACGCGACGACCCACCCAACGGCTGGAAAGCCGGGCGAAA 30037 30 100.0 37 .............................. CCTTCAAACGGGGCATAACCAACACCACCTTTCACTA 30104 30 100.0 39 .............................. CCCGTTAGCGTCGTAAGTGAGTTCAACGTTACGCGTATC 30173 30 100.0 36 .............................. CGCCGAAGGACACCCGTCTGGGCGTACACGGCATAG 30239 30 100.0 37 .............................. GTTAGACGACAAGGCGGTCAATACGTCGGATAGGAGA 30306 30 100.0 36 .............................. GGTTGAAGGTGAGGGTGAGGAGGCCGAGGCTAATGC 30372 30 100.0 38 .............................. ATCATGGAAAACCGCGCCATACCGCCCCCTCCGCGGGT 30440 30 100.0 37 .............................. CACGATGGACGAGCTGTTCGAGGCAGCACGTGCGAAG 30507 30 100.0 39 .............................. GCTACTTCAATGGTACTGGGAATACCAACCGTATCACGA 30576 30 100.0 38 .............................. GCGCAAGAAAAAGCGCCGCGTGGGGCGCTCTTCTCCTC 30644 30 100.0 39 .............................. CCGGACATCATCGAGGTGTTCGGGCAGAACGTCATCGAC 30713 30 100.0 37 .............................. TGTTTTCACTACGTGAAAACAAAATCGGGCGTGGGCA 30780 30 100.0 38 .............................. CCGTCGATAACCGCAAGCCCAGCAAAGCGCCAGAGCTT 30848 30 100.0 36 .............................. ATGGTCATGTTGTCTCCCTCCTAGTTCGTTTTTTTG 30914 30 100.0 36 .............................. TCGGAGCCGTAGGGGTTCGCCATCACGCGTCACCCT 30980 30 100.0 36 .............................. AGCTGGCCGGGGTTCCGAACTACACCGAGGTGTACG 31046 30 100.0 37 .............................. GACCACCAACGCATTGCTTCAGCAAACGACATTTCGG 31113 30 100.0 35 .............................. ACACGTATCGCCTCCTGCGCTCGCGTGGCATTCCC 31178 30 100.0 36 .............................. CCGGTCGCCCTCGGACCGCGAGCGCAGGGTCGGCCC 31244 30 100.0 38 .............................. GATCTAGAGCATGGTACCGATCCCATAGACGCTCGATC 31312 30 100.0 37 .............................. TGCCCCTGCTGGTACATGAAGGCGATTTGCTGAATCG 31379 30 100.0 38 .............................. TTAAGGTTGCGCAGAAGCAAAAGGGAGTCGGTATTACC 31447 30 100.0 36 .............................. CTGACCCAGTAGTTATACCCGATGCCAGCCCATCCG 31513 30 100.0 36 .............................. GAAGACGGCGAAGAGGGGGCCCGCGAGGCCGTCCGC 31579 30 100.0 36 .............................. ACGAGGTGGAGTTTCGGGAGGACACCGACGAGCAAT 31645 30 100.0 41 .............................. GTCCGCCGTCCGGCAGACCGGCGCACCCGTCTTTTCCCCCG 31716 30 100.0 37 .............................. ATCGGCTCCCGCATGTCCGTCTCCACCTGAAGGGAGC 31783 30 100.0 38 .............................. CGTTTGAAGCCAAAAAACTGAGGGAGGGGTTGTGATGA 31851 30 100.0 38 .............................. ACTGCACTGGTGTTCTTCGTCGTCGTGGACTATGTATC 31919 30 100.0 37 .............................. CCCCAAACAAGGGCAACAAAAAAGCCCGGCTCATTGG 31986 30 100.0 36 .............................. AGTATACAAAGTAGCGGCCGATGATAAACCCTTCGT 32052 30 100.0 38 .............................. AGGGGAACATCTACGTCTACCGGGCGGTCATGACCATT 32120 30 100.0 37 .............................. GCCGGGAACGCGTACATTGAGGCGGTCCGGCCGACGA 32187 30 100.0 37 .............................. ATGATATCCTCTGCCGGAATGTCGTCGTACAGGACGG 32254 30 100.0 37 .............................. GCCGGTCGGCCTCGACACCGTCCTCACCGTCTGTTGC 32321 30 100.0 37 .............................. CTGGGGATCACCGATGATGTCCAGCTTGTCAAGGTTG 32388 30 100.0 38 .............................. TGTTCAAATCGGCCACGGAGATTTACGACACCACGTCC 32456 30 100.0 36 .............................. GGGCTCAGCAAGACCGTCTCGTCGATTTTTGTCGCT 32522 30 100.0 38 .............................. TTCCTGCGAATAAGCCTGCCGTAAACAAAAAAATACGC 32590 30 100.0 36 .............................. CGCTATCGTTCCAGTAATCCTCCCGACTTCCGCCGA 32656 30 100.0 39 .............................. AACTTTGGAACGTGAGCGAAAACACGATCCGCACGCTCA 32725 30 100.0 37 .............................. CCCCGCACCAAAAACGGCTGAGAGAGGCATTTCCGCG 32792 30 100.0 38 .............................. CCACTCCCGTGGGCCGCTCCGAAGACTTGAAGCTGCCC 32860 30 100.0 38 .............................. ATCCGTTTGGCGCCGTGCTCCCGCGCCATCGCCAGTGC 32928 30 100.0 36 .............................. ATTCTCATTGGCGATCAGGATGATGAGGAGTTCATT 32994 30 100.0 40 .............................. ACGCGGGACAATTTTCGCGCCTTCGCGTTTGCCCCGTACA 33064 29 76.7 0 ...................-.C...CCTGT | ========== ====== ====== ====== ============================== ========================================= ================== 50 30 99.5 37 GTTTGGAGCCTACCTATGAGGGATTGGAAC # Left flank : CCGCCTTCAAGGCCGTCAGCCACTGCTACCTGCGCCCGCGCTACGAGGACTGGCCCTACAACATCTTCACCATGGTCCACGGCCGCTCGCTGGAGGAATGTGAGGCCATCCTGAAATCGATTGAGGAGGAGACGGGCATCACCGACCGGATCGTGCTCTACTCCACGAAGGAGTACAAGAAGACGCGCGTCGAGTACTTCACACCGGAGACGTACGAATGGGAAGCGAAAGTGGCGGAAGAGATGGGGTTGTAAAGCGGAATTCCCCTGTTCCACGGTTCCTACGCGCGGCGATCCGCCGCAGGCAATGGCGGGTCGCTTGTTTTTTGTGTCGTCGACCGGCAGTGTTGCAAAAACTCCGGCAGGTCGACGACACTTCTGCAAAATCCTTTCTCCAAAAAGCCCTCTTGCGGCGCGGTCTTCAGTGGTGTACAATACTTTCGTAAGATTTTGCGAGCTTCGCGCTCACACTTATCCCCTTGTTGGGGCAAGGTTTTTGGG # Right flank : AATGAAACATGCGGGGGTTTGAGCAAATGAAAACCTCCTGATATCG # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGGAGCCTACCTATGAGGGATTGGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [7,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.70,-0.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [48.3-43.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.37 Confidence: MEDIUM] # Array family : NA // Array 1 17848-18248 **** Predicted by CRISPRDetect 2.4 *** >NZ_BMOF01000042.1 Calditerricola satsumensis strain JCM 14719 sequence042, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ====================================== ===================================== ================== 17848 38 97.4 33 G..................................... TTGCAACGGCGATGCGTATCGCAGTTGGGTGGC 17919 38 100.0 35 ...................................... ACGCGGTTCCGGTGGAAGCCGTCGACGACGATGTA 17992 38 100.0 34 ...................................... AAGGGTAGAAGGTTATGGGGTATATTGTCTGTGA 18064 38 100.0 34 ...................................... ACGCCTGCCCTGCCTCAAGACATCAAAAAAATTG 18136 38 100.0 37 ...................................... CGATCATGCGCTTGCCGAAATCGGCCCCAAAGTCCCA 18211 38 84.2 0 .............................C...CCTGT | ========== ====== ====== ====== ====================================== ===================================== ================== 6 38 96.9 35 CGTTGCATTCGTGTGACTCGCTTCAAGAGGATTGAAAG # Left flank : CTCCTCGAGGCCGAAGGGTTCGTCAAGGTGGTCGCCGACAAGGAGACGGGCACGGTGCTCGGGGTGCAGATCGTCGGCCCCGAGGCGTCGGACCTCATCGCCGAGGCGGCGCTAGCGGTCGAGATGGGGGCGACGCTGGAGGACATCGCCCTCACCATCCACGCCCATCCGACCCTCGGCGAGACGATGATGGAAGCGGCCGAGGTGGCCCTGGGCCACGGCATCCACGTGCTGACGAAGTGACGCGCAGCCACAAGCCGGTCTTGCTGATGCGGCAAGGCTGGCTTGCGTATTTTTGATGGCTGTGGTTTCATTTCACGGTTAAATGGAATGAATATTCAAATAGTTAACCGGTGTTCTTTCGCTTCTTTTCACTTTTTCGTGGCTGCCCCCTTGTTTTCGTGCAAAGCGGCGATTTTCGAAAAAAATCGTTGGTAAAAGGAATAAGCGTGTGGTAAAATCCCAGACAGGACAAGGATTCTTGGCTCCTGAGGCACTCG # Right flank : TAATGAAACATGCGGGGGTTTGAGCAAATGAAAACCTCCTGATATCGTGGTGGTGTCAGAAGAAGCACCCGCCACCACGAAAATCAGGAGGTAGTACCCCTATGATAGCACAAAATCGCAAGCTTGCCACCATTAACGATTCCACGCTCATCGTAGCCGTTGATATCGCGTCCCAGAAACACGTGGCACGTGCGATTAACTGGCGTGGGCACATCCTTGGCGAACCGTTGATCTTTGACAACCGACTTGAGGGGTTTGAGGTGTTCTTACAGTGGATCCGTCAGCTGCAGGCGAAACACGGGCTTGTGGACGAAAATGAGAAAATAGTGCATTTTAAAAAATTTTAGTTTATTTTTTACAAATTTGTGACAGTAAAAGCAAAAGAATTTGTCGAAAAAGTTGGTAGAAAGCGCTTTCATTTAGGAGGGATTCTGATGTCCGATCAAAAACAGCGCCGAAGAGTGTTGATGGCCAGTCTTGTCGGGAACTCCATTGAATGG # Questionable array : NO Score: 6.11 # Score Detail : 1:0, 2:0, 3:3, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CGTTGCATTCGTGTGACTCGCTTCAAGAGGATTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:52.63%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.40,-0.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [48.3-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : NA // Array 1 2280-465 **** Predicted by CRISPRDetect 2.4 *** >NZ_BMOF01000045.1 Calditerricola satsumensis strain JCM 14719 sequence045, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================== ================== 2279 37 100.0 36 ..................................... CATCTTGCGGGCCGCCTTGGCCGCGTCAAGGCTCCC 2206 37 100.0 36 ..................................... ATTAACGAGATCGCGAACCAAAAATCGCCAGACCCC 2133 37 100.0 36 ..................................... TTGCTACTTCGCTCATCCCCTGAAGCGCGCGCTGAA 2060 37 100.0 38 ..................................... CGCCGCTTCTCCCGCTCTCGGCGGTCGTGTTCGAGTCC 1985 37 100.0 39 ..................................... GCGCCCTTAGCGTCGGGTAATCATATTGCGCAAGGGCAG 1909 37 100.0 36 ..................................... GTAAACGGTACGTATTACGACTATACTGCCGCGTCT 1836 37 100.0 37 ..................................... GCGCGACATCGAGGTGTTTTATCAGCGGTTCGCTATA 1762 37 100.0 38 ..................................... GTACGTGAACGCCGCCGCAGATGGGCACGCAATTCCAC 1687 37 100.0 37 ..................................... AGAGCTTGGGACAGTTCGTTCAAAGTCGGCGCATACC 1613 37 100.0 35 ..................................... CAACACCATTGATTTTTGTGCCGGTTACGTCCAAC 1541 37 100.0 37 ..................................... CGGGGCTAACTACCTGCCGGCCGACACCGGGCTCGTC 1467 37 100.0 34 ..................................... AGATGTATCCTGCTATCTCACGCAACAGGTTCTG 1396 37 100.0 35 ..................................... GTTGACTGCGTGCGATGGGTGCCAGCGGAAAAGGT 1324 37 100.0 42 ..................................... GTGCTGTTGATCTCCTGGGCAATGCGCTCCAGCACGCGGCGC 1245 37 100.0 38 ..................................... TTTCGAGTTCATCTAGCAAACGCGGCAGGATATTTCGA 1170 37 100.0 38 ..................................... ACGACCCGCAGCCCGTATCTGCCAGGGGCATACTCACC 1095 37 100.0 38 ..................................... CCGGTTCTCCCACGACCTTGCCTACGATCGTGGTTGTG 1020 37 100.0 35 ..................................... TGTCATCGTATCTCGCGTGATCGACGGGGACACGT 948 37 100.0 39 ..................................... TCAACCAGCCACGGGAGATCGGCATCGCACCAAAGAGCC 872 37 100.0 36 ..................................... ATTTCCACCACCTGCACTCCTCCCCGGCTGGGCTTC 799 37 100.0 37 ..................................... CAGCGCGACGTATTGAGCAAGCTGGTCGTCCGTCAGC 725 37 100.0 36 ..................................... TTAGCCTTTTGGAATGCTTTAACGGCATCTTCAGTC 652 37 100.0 41 ..................................... CCGCCGGCCGCGGCCGTGTTCTCGTCGTCCTCTTCGCGCTC 574 37 100.0 36 ..................................... TCCTTACGTCACCGTCTTGCTCACGCTCGTCAGCCG 501 37 83.8 0 ............................C...CCTGT | ========== ====== ====== ====== ===================================== ========================================== ================== 25 37 99.4 37 GTTGCAGAAGACTGACTCGTTGCAAGAGGATTGAAAG # Left flank : AAGGCCTTTCTGTATATCATCCCGGAGAAGCGTGCCCACAACGTTCCCATTACCGAGGGGCTGCGCACCCACATCCGGCGCATGCTCACCATGATGCGCACCATGGTGGAACGGGAAATTTTTCCCGAGCCGCGATCCCGTGCCCGCTGCTTTAGCTGCGAGATGCGCCGCTATTGCAACGATCTCGATGATGCGTCCGGCGCGTTTGAGGAAAGTCCCGCTCAAGCCAAACGGTTGGTCGATTGCTTCTGAAAATTGGCATTCGTGTTTTCAAACGTCCCTTGCGCTCGCAAGGGGCGTTTTTTATTTCACCAGGGTTCAGATGTACTGATACGTTCGGGGATATTTGTTAACACTAATAAAAAAGAAGTTAACAATTTTTCGTGGCTGACCCCCGGTTTTCGTGCAAACCGGTCATTTTCGAAAAAAATCTTGGCAACGAGCGGGGGTATATGGTAAAATCCCAGACAAGACAAGGCTTTCACGGCTCACCGACATCG # Right flank : TAATGAAACATGCGGGGGTTTGAGCAAATGAAAACCTCCTGATATCGTGGTGGTGTCAGAAGAAGCACCCACCACCACGAAAATCAGGAGGTAGTACCCCTATGATAGCACAAAATCGCAAGCTTGCCACGGCTCTAAGTCAATAACTGTGGATGTGAGGTCAACCAAGCCAAGGGCATAAAAGCGAGGAGCATCTTCCGCACATAGATTTCGCGGTTGCGGAACCCGTAGCTGATTCGTTTGAGCAGCTTGATCTTGGTGTGAACGCCCTCCGTGTAGCCGTTTGAAACACGCCAGGTGTGGTAGGCCAGAATCGCCTCGCGCCAGCGGCGGAGCGTGCGTCCCCACTGCATGAGCGCGGCATCGCTTGCCGACTGGGTCTCAAAGATCACGCGGTCCAAGATGGCTGCGGCTTCGTCTCGATTGGAGGCGCGGTAGACGTCTCGCAGCTGCTCCTTGACCCAA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:0, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCAGAAGACTGACTCGTTGCAAGAGGATTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:54.05%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.90,-2.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [55.0-46.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : NA // Array 1 590-37 **** Predicted by CRISPRDetect 2.4 *** >NZ_BMOF01000051.1 Calditerricola satsumensis strain JCM 14719 sequence051, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 589 37 100.0 37 ..................................... TAGTAACTCCGCCGCTATGTAAATCAGCCCGTCCAGC 515 37 100.0 38 ..................................... TTCAGGGGTGGGATACATGGACCCCTCCCAGGAAGCAC 440 37 100.0 36 ..................................... ACTTCCATACACCAACAGGGCCACCAAAACGCCGCT 367 37 100.0 36 ..................................... CGTCTTTAGGGCCTGGCATGCCAGCGCCAGGGCCAT 294 37 100.0 37 ..................................... TTACGCCGCATGGCAGAGCAACTTCGGCGGCATCCGT 220 37 100.0 34 ..................................... CTCCGTTTTTATCCGTCACCGTCAGGCCATCGCC 149 37 100.0 39 ..................................... GTAGATCGAAAGTATCTACGTGATCTCGTGGAACGGGTG 73 37 83.8 0 ............................C...CCTGT | ========== ====== ====== ====== ===================================== ======================================= ================== 8 37 98.0 37 GTTGCAGAGAGTTGACTCGTTGCAAGAGGATTGAAAG # Left flank : ACGTCCTGACCAAGGAGGAAGGCGGTCGCCACACGCCGTTCTTCAACGGCTACCGTCCGCAGTTCTACTTCCGCACGACGGACGTCACGGGCACGATCAAGCTGCCGGAAGGCGTGGAAATGGTCATGCCCGGCGACAACGTCAACTTTGAAGTGGAACTGATCGCCCCGATCGCCCTCGAAAACGGGACGCGCTTCGCCATCCGCGAAGGCGGCCGCACGGTCGGCGCGGGCGTCGTGACGGAGATCATCGAGTAATTCGCGTGGGGACAGCTGCGCGACAAAACCCCCGGCCCAACGAATGGGTCGGGGGTTTTCTCATGTGCGCGGGTTTAACCAGTAGGAAATGTAAACCAGAGGAACCCATACGGTTGACGGAATTTCGTGGCCGCCCCCTGATTCTGTGCAAAGGCGTGATTTTCGAAAAATCTGTTGGCATAAATGGGATGCATATGGTAAAATCACAGACAGGACAAGCCGTTTCCGCTCCAACCCGAATCG # Right flank : TAATGAAACATGCGGGGGTTTGAGCAAATGAAAACCT # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:0, 3:3, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCAGAGAGTTGACTCGTTGCAAGAGGATTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:54.05%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.10,-2.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [35.0-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : NA // Array 1 2706-1 **** Predicted by CRISPRDetect 2.4 *** >NZ_BMOF01000061.1 Calditerricola satsumensis strain JCM 14719 sequence061, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 2705 30 100.0 36 .............................. AAAAAGGCCTATCCGAGCCTCGCATCCTCACCGCTC 2639 30 100.0 37 .............................. AGTGGGTGGAGCCAAAGAACACGAGCCGTACCTGCCC 2572 30 100.0 37 .............................. ACTGCTGGTGTGGTTAACAACAAAATGTATGCAGTAG 2505 30 100.0 36 .............................. GCTCCGGACTCGGTTCCGGCGCAGGATTCGGATTCG 2439 30 100.0 36 .............................. CCGTTGCTGGGCTGTTTTATCTCGTTGGATTGTGGT 2373 30 100.0 36 .............................. TCGGTCGTCCACCCACGCCACGCCATTCAAGCCGTC 2307 30 100.0 38 .............................. TCTCGCGCGCCGCCAAACGCTATCTCGCGTACAAGAAC 2239 30 100.0 36 .............................. CGATATGCTGTACCAATTGCAACGCTCGAAAGACGA 2173 30 100.0 37 .............................. TCGCCTTTCCGCAATCGTTCCGGCCTCATCTGCGCCT 2106 30 100.0 37 .............................. ACCGGTGTCTGTGTGATACTGGTCCGGTGTCTGTGAG 2039 30 100.0 36 .............................. TCGATGATTGAGACGCTGGCCGGCATTGCCGGTTGT 1973 30 100.0 38 .............................. TGCGCAGCTCATAAGTCTTCGCGTAGCGCTCACCTCGT 1905 30 100.0 37 .............................. AATCAAAAAGAAAAGCCCTTTAAAGGGCTTTTTGAAA 1838 30 100.0 38 .............................. AAACGGCGTTCCTCAACTTCGTTGCCACGCTGTTCGGC 1770 30 100.0 36 .............................. CTCGCGGAGCGTGCTGGTATAACGAAGACGGCGATC 1704 30 100.0 36 .............................. CACAACTCGTACACGAGCCACGGGCTCCATTCACCG 1638 30 100.0 38 .............................. ATACGGCATGTTTGGTCGGGCTCGTCGGCATGGAACCG 1570 30 100.0 37 .............................. ATCCTACAGGGGATGATACACGATGATTTTTGCGCGG 1503 30 100.0 36 .............................. TGCGCTTTAGAGGAATGTCCCAATGAGGATGAGCTA 1437 30 100.0 36 .............................. CTTTGGTCGCCGCATTGTACCATCCGTCGCCAAAAA 1371 30 100.0 36 .............................. AAGTGTCGTCCCATTTCAGCCCTCCTTCTTGCTTTC 1305 30 100.0 38 .............................. TCGCTTCATCTTCTGTTTTATGGTAGGTAACAATAAAG 1237 30 100.0 37 .............................. GCCGCTATTTCCGCAATGGTCAGCCACTCGCCCTCCT 1170 30 100.0 35 .............................. ATGCGACGCTAACGGTTGCGAGCCTGTCGGACATC 1105 30 100.0 36 .............................. CCGGAACGGCGCAGACCAATGACCAGGCCGACGACC 1039 30 100.0 36 .............................. GTGATTTGATATGCTTTATTGATGCTTTAAGGGTGA 973 30 100.0 38 .............................. CTGCACAATCTCGATTACCCTACGCGCTGGGAGATTGG 905 30 100.0 37 .............................. TGCATGTCCTCGCTGAATTCGTGGATGGCGTAGTAGA 838 30 100.0 37 .............................. TGCGACGTGGAGATGCTGAGATGAATTTCGCATACAA 771 30 100.0 39 .............................. AAGCTTTAGAGACAATTCAATGGGTAGAAAGTGCATTCC 702 30 100.0 37 .............................. TTCGTATTGGGTGGCCCGTAGCATATGATGCCGGGCA 635 30 100.0 38 .............................. AACAGAACACCTGCTTCATCGAAAATAAGCAGGCATTG 567 30 100.0 37 .............................. CCATTTCTGGTTACAAGTCTTACACAATCGGGATCTG 500 30 100.0 37 .............................. CCACATCGCTCGAACGAGCGATGAAAGACTGGGCCTA 433 30 100.0 38 .............................. AGGCCGTAGCAAGCTTCCGCAGCACACGATCCTTAAGG 365 30 100.0 37 .............................. CTCCGGTCTCAATTTGGTGTACGCGTAGTAGCGGCCG 298 30 100.0 37 .............................. CACGCCTATTTATCGCCGCGTCGAGAACCGCAATTTC 231 30 100.0 38 .............................. GAGACGCAATCAATGCCTATGAAGCGAAACGGGGGTGA 163 30 100.0 37 .............................. TCGTGGGCCGCCTCGCCTGCATTCATTTCCCGCACCG 96 30 100.0 36 .............................. TGACACCGCACGCTGTTCGTCAATTTCAGCAGCGTG 30 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ======================================= ================== 41 30 100.0 37 GTTTGGAGCCTACCTATGAGGAATTGGAAC # Left flank : CCCTTTGTCAGCCGGTGGTGAATGCTCGTGTACGTGATCTTGGTGTACGATGTCGATGTCAAGCGCGTGGCCAAAGTGCTCAAAATCGCCCGTCGGTACTTGACTTGGGTACAAAATTCGGTCCTCGAAGGAGAGCTGACTCCCAGCCAGTACTTCCAACTCAAAAATGAGCTCCGGCGTGTGGCCAATCTCAACGAGGATTCGTTTATTTTTTACGTCATGCGTACCAGCCGCTACAGCGAACGCGAAATCATGGGCGTACAAAAAGGCGGATGGGAGACCATTTTGTGAGGTTCCGAATGCGCATCGCAACTTCTCTGCACTTGGTGTCGTCGACCTCCAGTGCTGCAAAAATGCCAGGGGGTCGACGACACCCATTTTTTGTCTCTCCTCGCCATTTTCCTCTTGCCTGCGGACCTTCCGTTCATGTACAATGATTTCGAAAGCTTTGGCATGGTGCCCGGTGCCCTTAAGAGGGTGCTAGCATCGCGATTTTTTGG # Right flank : C # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGGAGCCTACCTATGAGGAATTGGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.20,-1.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.37 Confidence: MEDIUM] # Array family : NA // Array 1 10746-10483 **** Predicted by CRISPRDetect 2.4 *** >NZ_BMOF01000065.1 Calditerricola satsumensis strain JCM 14719 sequence065, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 10745 37 100.0 38 ..................................... TTGAACCCGTCGTAGAGGTCGGACAGGGCGCGCGCCGT 10670 37 100.0 39 ..................................... TTAATCGCGTACTCGACGTTGTACCCGCATTTGCGAAGC 10594 37 100.0 38 ..................................... GAGAGCACCAAGACCGTCGAGCCGTATGGGAAGCAGGC 10519 37 78.4 0 ....T...................CCT.T.A....TA | ========== ====== ====== ====== ===================================== ======================================= ================== 4 37 94.6 39 GTTGCAGAGAGTTGACTCGTTGCAAGAGGATTGAAAG # Left flank : GGGAGAAAACGTGCGAATGAGTGAGCAAAACGGAGAAAAAGGGTTAGTCATTGAGGGAGGATTGAAAGTCAAGTCTCCGACCGTCCCAATGCCCTGCGCTAAA # Right flank : CATATGAGCTTGAGCATATAAAGGCGCTCTTGAGATCCATTGCCGTGGTTATGTACGGGGTGAAAGGACAATTAGGAAGTAAAAGAGTAAAAAAAGTAAAAATAATTATACATCCTGCTATAGTATGAGTAGTCGTTTGATTTAATTAAGGAGGGATACCTGTGAGCAACTGCATCTTTTGTGCAATTGCCCAAAATACGGCGCCTGCTTGGGTGATCTATGAAGATGAGCATACGATGGCGTTTCTGGACATCGCTCCAGCGACAGATGGCCACACCCTGGTGATTCCCAAGCGACACGTACGGGATCTCTGGGAACTTTCTGAGGCGGATGGTCGTCATGTGATGGTGGCGGCGAAGCGGGTTGCCGAATGGATCAAGCGGGCGCTTTCTCCGGACGGTGTTAACCTGTTTCACGCAACGGGAGCCGCGGCTTTCCAGAGTGTCTTTCACTTTCATCTCCACGTCGTCCCGCGGTACAACGGCGATAGGGTGCGAAAG # Questionable array : NO Score: 5.59 # Score Detail : 1:0, 2:0, 3:3, 4:0.73, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCAGAGAGTTGACTCGTTGCAAGAGGATTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:54.05%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.10,-2.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [51.7-48.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : NA // Array 1 32-2748 **** Predicted by CRISPRDetect 2.4 *** >NZ_BMOF01000082.1 Calditerricola satsumensis strain JCM 14719 sequence082, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================== ================== 32 30 100.0 37 .............................. CGTTCACGCGGCATCCCCGCGCGAAGCGCGTACGAGA 99 30 100.0 38 .............................. GGTAGACGTTAGCCCCTTTGGGCAGGTCGGTTTGGCTA 167 30 100.0 36 .............................. CCGGTGATTCGTACTGGTACATGCCGCAGGAGGCCG 233 30 100.0 36 .............................. ACCTGTCGGCGCTGTCGGGGTTCGAGCACGAGAGCT 299 30 100.0 37 .............................. TACACTCGCAACGATACCATTTCAACCCCCTTCCCGA 366 30 100.0 36 .............................. TCCCCTTTCCAAAAAGTCTTAGCGACGCCGGGGATC 432 30 100.0 37 .............................. CCGCCGGGTGGTCATCGGTAATCACCACCGGATACGT 499 30 100.0 37 .............................. GCAGCCTCCGGGAGGGCGAAAACCTCCCGGAGCAAAG 566 30 100.0 38 .............................. CGGCAAGGAAGCCAGCAACTATACGAAAAGCCAATTAA 634 30 100.0 38 .............................. TTGGACAAGGACTCGAACCGTGGGAAGTGGCGCGCCGT 702 30 100.0 37 .............................. CCGTTCCCACCACTTGCGGTACTTAGCTCGCTTTTTC 769 30 100.0 36 .............................. ATCGGGCACAGAGATGGTTCTACACAGCGAAAGCTA 835 30 100.0 36 .............................. CCGATCCGAAGGCGGTGGTGGGCAAGAGCGTCAAAG 901 30 100.0 38 .............................. AGGTCGAGGAGCTTCCGCCGAGCGAGCGCGGAGCCGGC 969 30 100.0 36 .............................. ATCGGGCACAGAGATGGTTCTACACAGCGAAAGCTA 1035 30 100.0 38 .............................. GCCGGTGAACAGGTGGCCGGCGAAATGGCCCGCGTCGA 1103 30 100.0 37 .............................. TCGTTGGAAGCGGCGTACCGCAATGATACGCCCTTCC 1170 30 100.0 37 .............................. TTGGCCGTAAGCCGCTCGCCCCGTTCAAAACGCTGGC 1237 30 100.0 39 .............................. TTGGTATCCGTTCCCTGTTCTCAACCAAGACATTTCCCG 1306 30 100.0 36 .............................. GGATCTACCTCGAACCTCATGTAGTCGACCGTTTTA 1372 30 100.0 37 .............................. ACCGCTTGCACTGCTTCTTCGACGGTGGCGTAGGTGC 1439 30 100.0 38 .............................. GGCCTCACCAATGAAGTGAAGCGGGCCGCTGCCGGTAT 1507 30 100.0 37 .............................. CTGACCGGCGCGAATACGGTGTTTTTGTATCTGCTCA 1574 30 100.0 38 .............................. CCCTCTCGCCCGCTACGAGGCGGAGGGCGGCGAGTATG 1642 30 100.0 37 .............................. CCTCCGGGGCTGTGAACACCACGCACATCGCCGACAA 1709 30 100.0 40 .............................. CCAAGGTCGACGGAATCGCTCTCCACCACATGGCCCACCC 1779 30 100.0 36 .............................. CAGAGATTCTTGGCGTCCCTGTTGGCCGAGTATATG 1845 30 100.0 37 .............................. AACCGCATTGGCGCGCGCATCAGTGAGCTGCACACCG 1912 30 100.0 36 .............................. TCGGCGCTAGCCTTGGCGGACTTGGCCGCCGACCAC 1978 30 100.0 37 .............................. CGCTTGTACGGGGGCAGGAACGTGCGCTCGAATGTGT 2045 30 100.0 37 .............................. AGCTATGGCCGGTTGATGGCCGTTTGATGACCGTATC 2112 30 100.0 37 .............................. CCGACGAGATCGAGGAGGCGAAGCAGGTGGCTGCCTC 2179 30 100.0 37 .............................. CCTCTAGCTCGATTTCAATCCGCGGGTTTTTCCTGTC 2246 30 100.0 38 .............................. CCCAAATCCGAACAAAGGCGCGTCAGGTGCGGCGTGAG 2314 30 100.0 37 .............................. CAAAGCCCGCCCCCAGCTTGTAGCGGTCGTCCGTGTT 2381 30 100.0 36 .............................. TTGTAACGAATAACAAAGACCCTGAAAAGAGAGGAA 2447 30 100.0 39 .............................. TGTACGTGCCGCAGGAATTTTCTCTTTCCAATTTTCTGG 2516 30 100.0 38 .............................. CCTTCGATGGCCGGCATTCTGACGAATTTGGCATCTAC 2584 30 100.0 37 .............................. CTGAACTGGGGGAGCGGGTGAGCCACGAGGCAATACG 2651 30 96.7 38 ...........................G.. CCCGCGGATCACGCGCACGATCTCCGCGCATATGCCTC 2719 30 86.7 0 ................C........CA..T | ========== ====== ====== ====== ============================== ======================================== ================== 41 30 99.6 37 GTTTGGAGCCTACCTATGAGGAATTGGAAC # Left flank : GCTGCGCGAAACGGGCGATGGACCTTGGGGAG # Right flank : TCGTGTAAGGTACCGTCTAACTTACAGAGTGAATAGACATCTGGTTTGGCTGTGCGTTGCTAAAATAGAACGACCGCCCCCAAAGGCGTTTGATTCGCCTTCAGGGGCGGTCTTTTTGTGGATGTTGGCGTTGGTTACGGGCGCCGCAGCGTGACGCACGCCTCGTCGTCATAGTAGAGGTCGGTTCCGAGCTCGAGGCGGCCAGTGTAGAGAGGCTTCGGCGCTTCGGTCAGCTCCAGCCGGTAGACCGTGCTGATGTAGAAGGGCACATCAGGTTCGCCGACAGGAACGGGCGCCATCTTGGCCACCGGGTAGCCCTGGGCCACAATGTTCTCCAGCTGGTAGTCCTGGAAGGCGCCGAGCATGTCCGTAATGGCGAAGCCCATGTCAAGCAGGCCGCGCTGGATGTCACGCCACTTCTTCCACGAGGATTCGAGGTACGAGAGGCCGAAATACCCGGCCGAACCGGGACCCCGCAACGCTTCGGTGCAACGGCTCAA # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGGAGCCTACCTATGAGGAATTGGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.20,-0.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [16.7-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.27 Confidence: MEDIUM] # Array family : NA // Array 1 2729-91 **** Predicted by CRISPRDetect 2.4 *** >NZ_BMOF01000057.1 Calditerricola satsumensis strain JCM 14719 sequence057, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= =========================================== ================== 2728 29 100.0 39 ............................. CGTGGTCCACTCTTCCACCATCACCCCCGTTCGCCCAGC 2660 29 100.0 38 ............................. CATATCTTCTACAACAGCTGCACGAGTTAAAAGAATAT 2593 29 100.0 37 ............................. CTTTTCCTGGAGGCCGTCTGGTATACTGGAAAGTGAC 2527 29 96.6 39 ......................G...... GCCAAACTACGGGGGTGCCCGTGACTATATCGATACCGA 2459 29 100.0 38 ............................. CTTGGTACCGCCTGGGACTCAACAACCACGTTTGCCCG 2392 29 96.6 39 ...........G................. CAGCGGGCCGGCCTTCGCAGGCGAATGCGGCATGTAGGC 2324 29 100.0 40 ............................. CACAAATGAATCACCGATAAGATAACAAAGTCGTTTAAGC 2255 29 93.1 38 .GG.......................... TGTTGCTGCAATTGGCAAGACAAACCGCGCGTCTTCCG 2188 29 100.0 37 ............................. CAGTGCGCCCATGATTTCGTCCTTTTCGTACTCCCGC 2122 29 100.0 43 ............................. CTCACCGCCCCTCGCCGTGGTATAATGCTGGTAAGTCAATCCC 2050 29 100.0 38 ............................. CAACGGTTGTGGACGCATTGCTACCAGCCAGCAGTTAT 1983 29 96.6 41 ...............G............. CGGCTCTGGTTCCAATTCCAAAAACGCCAGCTGTTCGCCCA 1913 29 96.6 22 ....................C........ CATGACCAGCTTGCCGCAAGTG Deletion [1863] 1862 29 72.4 37 ..CC...GT....GCT.......A..... CCCGTAGTCTAGCACGCGGAAGTCGGCACCGTCGGAA C,G [1850,1859] 1794 29 100.0 38 ............................. CTTCTTTGTCATCCTTGCGTGAATAGCTTCCACCACGA 1727 29 100.0 40 ............................. TTGTCTGCGCTCGTTTAGGCTCAGCCACCACGCCTCTTTC 1658 29 100.0 40 ............................. TCTGTTTAGCCCTCCGCTCGCGCTCCTCGCGTTCGGCCTG 1589 29 96.6 38 .....................A....... TAGCAGCAGGGCCCCACCGATCCCCTTAATGTCCCGTT 1522 29 100.0 39 ............................. CACAGCCTGCGAGGTGACCGGTCGTGAACATGGCATTCG 1454 29 100.0 40 ............................. CCGCTTCCCTTCAAACGCCTCTTGCGCCTTCACTTTGAGG 1385 28 96.6 39 ..........-.................. CCCGGTTCGCGGCTCGTTAAACAAGGCGACGCCGCGCAG 1318 29 100.0 38 ............................. CCGTGTACCCCCAATCAGCCATGGCCCTCTCCATGGCC 1251 29 100.0 39 ............................. TAAGAGACGTGCAGCTTCCTCAGCGTACGGACGAACTGA 1183 29 100.0 38 ............................. CGCCGCCTTCATCACCAGCGTGCTGGTGACGTAGACGG TA [1167] 1114 29 96.6 37 ...........T................. TGCGCGTCAAACGCTGCACGCTCGTCGGGGCTAAGCT 1048 29 100.0 38 ............................. CCTCGGATTGTTTGGTTTTCTCAGCGCCACGGTGATCC 981 29 82.8 27 .G.......................CTGT TGGCCGGGAAATGCTGCACAGCGTCGC Deletion [926] 925 29 96.6 37 ........A.................... CCGAATAAGCGTATGGGCCAACGGTTCAAAACTGATC 859 29 96.6 37 .........................A... CTTCTCGCGCACCGCGTAATAAACCACCTTCATGCTA 793 29 96.6 39 .......................T..... CAGCTACGGCTCGCTCATAGATGCCGGTACTCTCGCTTC 725 29 96.6 38 ............T................ CCGGCTACAACCAGGGGTCTTCAATCGTGTAGCAGATT 658 29 96.6 39 .....A....................... TCGGATCTGTTGGCCACCAATCTGGTACTTGCGGCCACG 590 29 96.6 39 A............................ CTCGGTCACCACCGCTTGTTGTGCGTAAAGAGTTTGCGC 522 29 100.0 38 ............................. GACGACGACGGGGATGACGGCGACGGCTGGTTTCGGTT 455 29 96.6 38 ............T................ CGAGCTTGCAACCACAAGCTCCTCGGGGTTTTGGAGGG 388 29 96.6 38 ..............A.............. CCGCAAGTCGTTCTCCTCAGGTCGGCAACCCCAAATCC 321 29 100.0 40 ............................. CTCGAGATAGTTCAGGGTCTTGTTGTTTACAACATCAACA 252 29 96.6 37 ............................C AACTCGATGGGGTAAATGTACATGACCCCATCGCGCA 186 29 96.6 37 .............C............... TTCGTAGGGCAGCCCGAGCTGCACCAGCATCCCCGCC A [167] 119 29 79.3 0 ........TC...CG...G........G. | ========== ====== ====== ====== ============================= =========================================== ================== 40 29 96.7 38 GTTTTGACCTGAGTTATAAGGGACGGAAA # Left flank : CAAAACCGCGAAGCCGTTGCGACCTTGAACAAGACCTTGAACAAGTCTCGGGATATGCTAGATCGGGCCACCGGGATTAAAGCTCTTAAGGAGGTCTTGAAAGATAAAGAATTTATTCAGATACTTGAGCTGGAGGTCAATGCGCAGAGAAGCAATTCGGTGCAAAAAATGAAACTGGCAAAGCTTCTCGACGAATTGACGGAAAAACGGCATGCTTCCGTGGTGGCACACGGCATGAAACCGGTGTCGGAAGAAGACGCTGTAAACGGCTTGGCCGCCGCCAAAACGCTGTTGTCCAACCTGTTGCCGGATGGAGATGCGCTGCTTGCCTCTTATCCCTTGCAGCGTGCCCAGATTGAGCAGCTGATCGACTACTTGGCCAAGAGTTGACTGCAAGGTTTCGTCGACCTCCCGGCTTTTTTGCACGATTGGAGGTTGACGACATATTCAATGTGATTGAGCAAACGAAAAGCTTGATGTAGCAAGGTTTTTGAATGGGG # Right flank : ACTTACCCACTCTAAGCTGCTAGCAAAAAATCCCCGGCTCTACGCTAAAAAGTGTGGATGCCAAGAAGGAAAAAGGCGGTCAGCGAGCCAA # Questionable array : NO Score: 2.77 # Score Detail : 1:0, 2:0, 3:0, 4:0.84, 5:0, 6:0.25, 7:-0.01, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTGACCTGAGTTATAAGGGACGGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.62%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.00,-3.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [17-18] Score: 0/0.41 # AT richness analysis in flanks prediction: R [51.7-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.64 Confidence: HIGH] # Array family : NA //