Array 1 165488-165716 **** Predicted by CRISPRDetect 2.4 *** >NZ_FOKI01000001.1 Clostridium frigidicarnis strain DSM 12271, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 165488 30 100.0 36 .............................. CCAAGTATTCTTTAATTATATTCTAACTTTACAAGG 165554 30 100.0 36 .............................. TCCTTGATTGCTTAATAATTCTTGCCAAATATCATC 165620 30 100.0 37 .............................. GAAAAGTATTTCCTCAAATAGAGATATTAGAATTTAC 165687 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 4 30 100.0 37 ATTTAAATACATCTTATGTTAAGGTTCAAC # Left flank : TCAAGAATTGTACTTTCAATAAGTTTTCTTATATCCTTAGATATGTTTTTTATTAAAGTAGTATCTTCTATTTTAAAACTGTCTAAATCCTTAAATAATTTGTTATCTATAACTTTACTTATGTACCTATCATAAGCTACTGTTGAAACACAAAATCCTTCTGGTATTTTAAAACCAGCCTGTGTCATTAATCCTAAATTTAAGCCTTTTCCCCCAACTAATTTTAGATCCTTCTTCTCAATGTCTTTAAAAATTACTATTAAATCACTCATGAATTCCCATCCTTAATTTTAAAAATTATTTATTCTTTATTTGTATTCAATTCCACTAATTTTCTCTCCAAAGGTTATTTCGGTTATTTTACCCATAAATTAACATACCCCATTTAAAGTTATATATAAAATTTTAGCACTACAATTTATTATATTGTAGTGCTAAATGTATTTTTGTATATGTTTTTCCACAATAAATATAAATTATATATTTATTCCGGGATTGTA # Right flank : CCACTGTAAAATCAACGTTCCTATGATTAATAATATACCCTAAAGCCTTATAAATCAAGCAATTCTAAAAAATTTACCAATCGACTTTGATTTTTTTTGTTTCACAGGTAAAAAACCTCTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Questionable array : NO Score: 5.86 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTAAATACATCTTATGTTAAGGTTCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.40,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [80.0-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0 Confidence: HIGH] # Array family : NA // Array 2 168084-167794 **** Predicted by CRISPRDetect 2.4 *** >NZ_FOKI01000001.1 Clostridium frigidicarnis strain DSM 12271, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 168083 30 100.0 36 .............................. CTTAAAAGAAAAGAATTTATCGGTAAAATAAACAAT 168017 30 100.0 35 .............................. TTATACCCCATTACCTTTTTTAATCGAATTCATAT 167952 30 100.0 35 .............................. GGTATAGATTTATATTGTTCTTTAATTTCTTCATT 167887 30 100.0 34 .............................. TCTATCTCTCCCATATTGTATAGAGCAGCAATAA 167823 30 76.7 0 ................T.C.AA..GA...A | ========== ====== ====== ====== ============================== ==================================== ================== 5 30 95.3 35 GTTGAACCTTAACATAGGATGTATTTAAAT # Left flank : TAATCAAACAATGTATGCAATACGAACTTACAGTATAATAAATTATTTTACCAACAGAATATTAAAAGAAAACCTGTTAAACTATTGATATTACAATAGTTTAACAGGTTTTTTATATACAAATTTCAAAAATCGAAATCAGTTGGTAAATTTTTAAGGAAATCCTTGATTTATAAGGATTTAGGGTATATTGTTAATTATAGGAACGTTGATTTTACGGTGGGTTGAACCTTAACATGAGATGTACTTATTTTAGTGACAAGTTGTAGAGTGGTAAGTAACAAATTAATTAAATTATCTATTTAATAGTAAGCTCACATTATATTTTACCAACCGTATTTTAAAACAAAACATCTTAAATCCTTTTTAATTCAAAGGGGTAGGAGGTTTTTTAATATGTAAAACTAAAAATTAGAATCGGTTGGTAAATTTTAAAGGAATCCTTGATTTATGAGGTTTTATGATATATCATTAATTATAGGAACCTTGATTTTACAGTG # Right flank : GTATATGGTGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Questionable array : NO Score: 5.82 # Score Detail : 1:0, 2:3, 3:0, 4:0.76, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACCTTAACATAGGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.20,-2.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [13.3-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.05 Confidence: HIGH] # Array family : NA // Array 3 180143-178467 **** Predicted by CRISPRDetect 2.4 *** >NZ_FOKI01000001.1 Clostridium frigidicarnis strain DSM 12271, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================================================================================================================================================================================================================================== ================== 180142 30 100.0 34 .............................. GATTTACAAAATAACATACAAGATATGGACTCTG 180078 30 100.0 36 .............................. GAAGAGTATAGACTTTCATTGGAAACTGCTAAACAA 180012 30 100.0 36 .............................. AGAGAAATGGCTGACTGCTTAGTAGCATAGGCAGAC 179946 30 100.0 35 .............................. GCAATAAATCCGTTATATCCTGTAAATCCAATATC 179881 30 100.0 36 .............................. ACATATTCTACACCTTCTGAACTCAAAGTTGATAAA 179815 30 100.0 36 .............................. CCTTTATAGTAATGGGATTTACGGGTCCTAAGGCTG 179749 30 100.0 35 .............................. TTTATTGGTCCAAGTTCGTTTAAATCAATGGTAGA 179684 30 100.0 35 .............................. GGCTCTTTTTGTGATAATAGTGGCTTTTCATTTGT 179619 30 96.7 36 .......C...................... AGCTTATATCCTGTATCTGTTGTAAAAGTTGAATAA 179553 30 90.0 37 .......C.......GA............. TTGTACTTATCGCAGAAATCTAATAAGTTTCTGCTAA 179486 30 73.3 239 .......C........T.C.AA..GA...A GTATATGGTGAAGAGATACTTGGAGTTCAACAAAATAATACAGGAGAAGATCTTATAATATAATTTTACCAACCTCATTTAAAAATAAAACCTCTTAAAACCTTTTAAATTCAAGGGATTAAGAGGCTTTTTATTTGTGAAACAAAAAAATCAAAGTCGGTTGGTAAAATTTTTAGAATTGCTTGATTTATAAGGCTTTAGGGTATATTATTAATTATAGGAACGTTGATTTTACAGTG 179217 30 90.0 36 .......C.......GA............. CACCTTTTGCCTTACTAAAATGCTTACAGTCTGGAC 179151 30 90.0 35 .......C.......GA............. ACAAAATAATAAAGAAAAAGAAAATGTTGAGATTC 179086 30 90.0 34 .......C.......GA............. AGATTCAAACTTGGTTCAAAATGAGATAGCTAGG 179022 30 90.0 36 .......C.......GA............. CATGTTTGTATTTCTTTTTATCTAACCATTCAATTA 178956 30 90.0 36 .......C.......GA............. CATAATATCTACCTTCATCCTTGCTATCAAATTTAA 178890 30 90.0 36 .......C.......GA............. GGATTATTAAGTACATAAACACCTCGATTAAACCAT 178824 30 96.7 34 .......C...................... TCTAATTTAATAGATAAATCTACTAATAGATTAT 178760 30 96.7 34 .......C...................... GAATGGCACACAATGTAAAAGAATTATATAAAAA 178696 30 96.7 35 .......C...................... AGTATAATGTTTGCTGTTGCTAATGCAACTAGAAA 178631 30 96.7 36 .......C...................... TTGTTACTGAAACTATATAATTTTTGTGCTACAGGT 178565 30 90.0 35 ...A...C....T................. GTTTTAACTGGAGTAAATGTAAAAAATGCAAATGC 178500 30 86.7 0 .......C.......GA..A.......... | GTTA [178474] ========== ====== ====== ====== ============================== =============================================================================================================================================================================================================================================== ================== 23 30 94.1 45 GTTGAACATTAACATAGGATGTATTTAAAT # Left flank : TTAAACCTTTTAGTTTAAAGGAGAACATGTAATATGGGTGAAAAAATAAAGTATAACTATGCATTTTTGTTCTATGATGTTAATGAGAAGAGGGTAGGAAGAGTATTCAAAGTGTGCAAAAAATATCTGTCCCATTTTCAGAAATCAGTTTTTAGGGGAGCAATAACTCCATCAAATTTAATACTTTTGAAGAAAGATTTAAACAATATAATAGATAAAGAAGAAGATTTTATATGTATTATTAAATTGCTAAATGAAAAAGTATATGGTGAAGAGATACTTGGAGTTCAACAAAATAATACAGGTGAAGATCTTATAATATAATTTTACCAACCTCATTTTAAAATAAAACCTCTTAAAACCTTTTAAATTCAAGGGATTAAGAGGTTTTTTATCTGTGAAACAAAAAAATCAAAGTCGGTTGGTAAAATTTTTAGAATTGGTTGATTTATAAGGCTTTAGGGTATATTATTAATTATAGGAACGTTGATTTTACAGTA # Right flank : GGGCTATTGAATTATAACATTACATTTATGGTATTAACAGATATATCATGAATGTAAATTAGTATATACAGTAAAAATAAGGATTAGATTCTAGACTAATAGAATCTAATCCTTATTTTTATGCTCATGCATTAATTGATTTTTACCAAAGAAAATGTTATTGTGTAATTAAATGGTACAATATAGAGTAATTTGGAAAAGTAAAGAGGGATAATTATGAATTTTGTGGAATTAACAGTTACAGTATTGCTTAGCAATGATATATATTTTTCTAATAGTGGATATATAATTGGTAAAAATATAAACAAGAGCATGTTATTAAGTGATAGGTTAAAAGAATTACATCCTAAAAAAGAATATAAGAATTATGTTTTCAATAGTTTCTATCCTTTAGAAAAGGAGAAAACTTATAAAAAAGATAAGTTATATATTTTTAAAATAAGGGGACTAGATAAAGAGTTAATGAAAGAAATGCAAGAATGTTTAAAAAAACTAAAAAG # Questionable array : NO Score: 4.56 # Score Detail : 1:0, 2:3, 3:0, 4:0.72, 5:0, 6:0.25, 7:-0.94, 8:1, 9:0.53, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACATTAACATAGGATGTATTTAAAT # Alternate repeat : GTTGAACCTTAACATGAGATGTATTTAAAT # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-1.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA // Array 4 191065-190361 **** Predicted by CRISPRDetect 2.4 *** >NZ_FOKI01000001.1 Clostridium frigidicarnis strain DSM 12271, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================================================================================================================================================================================================================================== ================== 191064 30 100.0 37 .............................. TTAGCTGAAGCAATCCATTCCTTTTCTTCTAAGTTAA 190997 30 100.0 37 .............................. TTTATAATATATTCTTCCCATGTCTTGAAACTTAAAA 190930 30 100.0 36 .............................. GACATTTCTCCATTTACTTTAGGATTTAATTTATAA 190864 30 100.0 38 .............................. GAATATAAGAAATATATTTCAGATTTGATAGATGAAAA 190796 30 90.0 248 .......................C...TT. TAGTGACAAGTTGTAGAGTGGCAAGTGACAAATTAATTAAATTATCTATTGAATAGTAAGCTCACATTATATTTTACCAACGGTATTTTAAAACAAAACCTCTTAAACCCTTTTGAATTTAAGGGGGTAGTAGATTTTTTAATATGTAAAACTAAAAAATTAGAATCGGTTGGTAATTTTTAAAGGAATCCTTGATTTATGAGGTTTTATGATATATCATTAATTATAGGAACCTTGATTTTACAGTG 190518 30 93.3 34 ...............AG............. TATTGACCACTTAACAATGCAAATAGAATTACCG 190454 30 93.3 34 ...............AG............. TTTCTTAATCCTACAGCACCCAAACAATTATCTG 190390 30 93.3 0 ...............AG............. | ========== ====== ====== ====== ============================== ======================================================================================================================================================================================================================================================== ================== 8 30 96.2 66 GTTGAACCTTAACATGAGATGTATTTAAAT # Left flank : TAGGAGTTAAAGTTATGCCAAGAGTAAAATTAACTATAAAAGAAAGTAAGTGTAGAAGCGGATACCATAAGAAGGGTGATGTCTTTATTGTTGAAGATATATGTCCTCCTATTTGTCATGAGCTTTGGAATAATATATATCCAAATGTATACGCTCTTTTAAATGGGGCTACATTGGATTATGGTAATTGTAAAGCGAAGAAATTTGAGATGAAGTGTCCTGATAATGGTAGAGTTGTTATTTTGGGAGAGGTAGAAGAAGAAGAGAATAGTTAAGTAACAATTTAGTTAAAGTATATATTTAAGAGTAAAGTTATATTATAGTTTACCAACCGTATTTCAAAATAAAACCCCTTAAAGTCTTTTAAATTCAAGAGCTTAAGAGGCTTTTTAATATGTAAAACTAAAAAATCAGAATCGATTGGTAAATTTTTAGAGAAGTGCTTGATTTATAAGGGTTTAGGGTATATCATTGATTATAAGAATGTTGATTTTACAGTG # Right flank : TTACTTAATTAAGAAGTTGTATTAGATTTTTACGGGTTGAACCTTAACATAGGATGTATTTAAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Questionable array : NO Score: 5.96 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACCTTAACATGAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //