Array 1 565-3 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_LGTK01000090.1 Oceanobacillus caeni strain HM6 contig00090, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                 	Spacer_Sequence                     	Insertion/Deletion
==========	======	======	======	================================	====================================	==================
       564	    32	 100.0	    35	................................	AAGATTATGAACAAGCTCTTGGAAGGGCGTATAGA 	
       497	    32	 100.0	    33	................................	TTGAATAAAAACCCTATCTGTCGTTATATCATG   	
       432	    32	 100.0	    33	................................	TGGTGTAGCATGGCGAGAATCATTTAGGTGATA   	
       367	    32	 100.0	    36	................................	ACTAACTTTTTTTATCATCATAGCCAAGATTTTTTT	
       299	    32	 100.0	    34	................................	CGATTAGAAACTAATACTCAAAGCAGGGCAGTAT  	
       233	    32	 100.0	    36	................................	CTTTTGCTTTTGCTTGGATTGAAGAATTAGCAGAAT	
       165	    32	 100.0	    34	................................	ACGTTAAAAACATGTAAGGAGAGATATTAATGAA  	
        99	    32	 100.0	    33	................................	CAACCGTGCCTTTGATACCCTTTGACCTTCATA   	
        34	    32	 100.0	     0	................................	|                                   	
==========	======	======	======	================================	====================================	==================
         9	    32	 100.0	    34	GTCGCACTCTACATGAGTGCGTGGATTGAAAT	                                    	       

# Left flank :   AATATCCACCATTTTTATGGAAGTAGGTGAAGTGATGCTAGTAATAATCACATATGATGTTAGTACGTCAAGCAATGGAGGAACAAAAAGGCTTAGAAAAGTTTCGAAGGCATGCCAAAATTACGGTCAACGAGTACAAAACTCTGTTTTTGAATGTATTGTAGACGCTACACAATATACAATATTAAAACATGAATTAGAGAAACTTATTGACCCTACAAAAGATAGTCTTCGATTTTATAATTTAGGTAATAATCATAAAGCGAAAGTGGATCATATTGGAATAAAAGAATCTATAGATTTAGAAGAGCCATTATTATTTTAGTTAATGGTGCTAACCCTAAGCGCACATGAAATGCATAGGGGGTTAGCACCAGAAAATAGACTACTAATAGATAAAAAACTGGAAAATAGTAAGAATAAGTTATGTGATATAGTATATTTTTAGAAGAATAGTATTCTTTTGGAATATATGTTCTTGTTTTTTAAAGGAATTCGCT
# Right flank :  TTC

# Questionable array : NO	 Score: 9.26
# 	Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTCGCACTCTACATGAGTGCGTGGATTGAAAT
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         R Score: 4.5/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:53.12%AT]
# 	Reference repeat match prediction:         R [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-2.60,-4.00] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      NA [0-0] Score: 0/0.41
# 	AT richness analysis in flanks prediction: R [1.7-76.7]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,9.64   Confidence: HIGH] 

# Array family : I-C [Matched known repeat from this family],   
//


Array 2 9350-9514 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_LGTK01000090.1 Oceanobacillus caeni strain HM6 contig00090, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                 	Spacer_Sequence                    	Insertion/Deletion
==========	======	======	======	================================	===================================	==================
      9350	    32	 100.0	    35	................................	TCGTGACAAGAAAAACATAAACTTACTAGATTTGA	
      9417	    32	 100.0	    34	................................	GTGATAAAAGTCGTTGAAAAAGCACCCGTTCACC 	
      9483	    32	 100.0	     0	................................	|                                  	
==========	======	======	======	================================	===================================	==================
         3	    32	 100.0	    35	GTCGCACTCTATATGGGTGCGTGGATTGAAAT	                                   	       

# Left flank :   TCTGTATACTTTCCCAAGTCATGAAGCAAGCCTGCTAAACCAGCAACATGCATAAGTCCTAATTTTCCGCCAAATACCTCAGCTAAATGTTTAACACCATTTAAATGCTCGGAAACGGTTTGAATTTCCTTATCACTTTCACGCACATGGGCAATATAGACCATTTTAAACCTCCTTTAAGAATTCCATAAATAAATAGTACCACTAAATGAATAAATTTACAGTATTTGGTTACTAAATTTTCACATTATCATATTTTAATCTATTCTTATGAAGTGCTAATAGTATGTTTGTATAATTTTGCTAGGGAGGTCGTTATTATTTTAGTTATGGTGCTAACCCTAAGCACACATAAAATCATTAATAGGTTAGCACCAAAAATAGCCTCGTTATATGTATTTCTTTGTGATATGATGTGTTTATATTATAAAAAGTTACATATTTTTGTTTAGAATATGTCTTTTTCAAAATGCATGTTCGCATTTTGGGCGAAATTCGCT
# Right flank :  CAAAGCCTGTTTGTAGCGTTTGTTTTGTAGATAT

# Questionable array : NO	 Score: 8.67
# 	Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTCGCACTCTATATGGGTGCGTGGATTGAAAT
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         F Score: 4.5/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:53.12%AT]
# 	Reference repeat match prediction:         F [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 94% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-2.50,0.00] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      NA [0-0] Score: 0/0.41
# 	AT richness analysis in flanks prediction: F [68.3-36.7]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [9.64,0   Confidence: HIGH] 

# Array family : I-C [Matched known repeat from this family],   
//