Array 1 1576-52 **** Predicted by CRISPRDetect 2.4 *** >NZ_BMAQ01000038.1 Paenibacillus sp. DA-C8 sequence38, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ===================================== ================== 1575 33 100.0 34 ................................. AATGTTTTCCGCGATTGGAGTACGTCAAAGACAA 1508 33 100.0 35 ................................. CTTGCTGTACCCCTCCACATCGTCGGCGGTGTACG 1440 33 100.0 34 ................................. TTGATCAGGTTCTCCCGGCTGTATTTCTTGGACA 1373 33 100.0 33 ................................. CAAACCGAGCGGAATTTCATCAGGAGGGTCGCC 1307 33 100.0 33 ................................. TATCCTTATATAGAGGTGATCAACATGTACGGC 1241 33 100.0 35 ................................. TTGGACGATTTTCGGATTGACGTTATTCGCCAGAA 1173 33 100.0 36 ................................. TCGCAAGGCTATAGCCTTACGCAGACTGTTTACAGT 1104 33 100.0 35 ................................. CCTCGATCCCCAGAAGCATTTTGAGCTTTTTGAGA 1036 33 100.0 34 ................................. GATACGGTTTCCAGCGGTCTGATCTCAACCTGGT 969 33 100.0 35 ................................. TTCGATGGATTCGCAACCTCGCAGAGCGTCTCGTA 901 33 100.0 36 ................................. TAATGTAGTTAGGAAGGAGTTTTGTACCAGCATGTA 832 33 100.0 37 ................................. AAAAGCTCCTCCTCCGGAAGCCGTTGTCGTCCTACTA 762 33 97.0 34 .....................T........... TGTTCGACGCAATTTCAAACGGTGCCTTGAAGAA 695 33 100.0 36 ................................. CGTCAGCACGCCTTTAATCAGATCGCCTAAGAACTT 626 33 100.0 33 ................................. TGATATACAGATAAGGTTTTATGAAAAAAATTT 560 33 100.0 34 ................................. TGATAGTAAAAGTTTTAAGTGCGGCTTTATTCCG 493 33 100.0 35 ................................. ATGCCTAATTGCTCTACATCGTAGTAACCATCATA 425 33 100.0 35 ................................. TATTAATAGTAAAGTTAATTCGATCCAGTTTCCCT 357 33 100.0 35 ................................. CGATCTGGCGGAGCTGATTACCAATAGCATTTTTC 289 33 100.0 36 ................................. ACGGCTCAACCAATAGTGAGCATGTAGAGTGGGAGT 220 33 100.0 35 ................................. GATACTTTAATATGTGCCATTACATAATCATTAGC 152 33 97.0 35 .............C................... AAGCATGCCAACTGTGTTTTTATGTGCTACATATT 84 33 97.0 0 .............C................... | ========== ====== ====== ====== ================================= ===================================== ================== 23 33 99.6 35 GTCGCACTCCGCATGGAGTGCGTGGATTGAAAT # Left flank : ATTGTTTTGGTATGATCTGAAGCGTTACTCTAATAGAAGGAATACGAAGATGGATTTAAGCGGATTGTTAGGAGCTATGACCTTTGAGGGGGACTTAACGATATTCGCTCCTTGGCTGCATGCAGCACGGGTTCTGCATATCGGTCGTAACGTTACTTTTGGCTGCGGACAAGTAGAGGTGGGACTATATTGACAGATATGAGAAAATGAAAGTACATCTGAAATCAGGGAATTTGTTTATAATGGATTCCTTTGTTGATTCCTTCGCTTGGTCAGGATATACATCTGCATAGGTTTTAGATGAATTGACTGAAGATCGTTTATGTTCATGGGTGCGAACCCCAAGTAAACATGAAATCCCTGGGAGGTTCGCACCTCCCGTCGCTGTAAGGCTCACAGCGATTCATGTGTAAATTTACGCCAAAATGTGGTAACCTAAAAATAGGTTCGCACTTTTAGCTCCGCGAAGCCTTGATGTTCAAGGCTTCGCAGTACGGGCT # Right flank : TCTTGAGCTTCTCGGCATCCCAATCCCCTTCGATCGTCGCACTCCGCACGGA # Questionable array : NO Score: 9.24 # Score Detail : 1:0, 2:3, 3:3, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCCGCATGGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [8,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCTCTCCGCAAGGAGGGCGTGGATTGAAAC with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-6.00,-6.20] Score: 0/0.37 # Array degeneracy analysis prediction: R [0-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [33.3-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.68 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 10467-8594 **** Predicted by CRISPRDetect 2.4 *** >NZ_BMAQ01000038.1 Paenibacillus sp. DA-C8 sequence38, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ======================================= ================== 10466 33 93.9 35 ...........C.C................... GTAGATGATTGCACTTATTATGACTGCTAGAATAA 10398 33 93.9 34 ...........C.C................... TCCGGCGTCGGAACTTCAAAGAAAATACACTGAC 10331 33 93.9 39 ...........C.C................... CAGCACGCGGCGTCTGATTTTTTCCTCGTTATCATCGAT 10259 33 100.0 35 ................................. TTTTTGTTCCGTCTCCACTCGCAGGGTTTTGTCAC 10191 33 100.0 33 ................................. ACCTCTTTTTTAAAATAAAAAAATCATCACTCG 10125 33 100.0 33 ................................. ACTCCAGACATGCAGATCATCTTTCCAACCATT 10059 33 100.0 36 ................................. AAGAGCAGGAAACGGGAGGCTGAGGCTTTTCAGGAT 9990 33 100.0 35 ................................. GTCTAGTGCTACGAATCCGGTTTTTGTGGAGGGAT 9922 33 100.0 39 ................................. CCTATCGATACGCTCTTCCTCAATGTCCCGTGCAGCTAA 9850 33 100.0 35 ................................. ACTTCGAGCGGTGAGATCGTCGCGTTCGTCGAGAC 9782 33 100.0 34 ................................. ACTCCAATTATCTTAGCAAAATCCTACACACAAT 9715 33 100.0 39 ................................. TAAATTCGTGACTCCTGATATAATGCGGTCACGCTCCAG 9643 33 100.0 34 ................................. TCAATGAAGTCAAGAGAGCCGCCAACCGGGAGGA 9576 33 100.0 35 ................................. TTGTTCGTATGTGTATTTGAGGTATTCAAAGATCA 9508 33 100.0 34 ................................. TCAATGAAGTCAAGAGAGCCGCCAACCGGGAGGA 9441 33 100.0 34 ................................. CTTATATGTCACATAGTGGTAAAGGGTTTTCATA 9374 33 100.0 36 ................................. GATGGCTGCTCGGTATTGCCCCTCTGCCAAATCACG 9305 33 100.0 34 ................................. TTAGAGCTTTACGGATCCCCCACATTACAGCATA 9238 33 100.0 35 ................................. AAGCGATATGCAGCCCCAACTTCGGTTAATGGCAC 9170 33 100.0 36 ................................. AAGACGCGCAGGGCTGATTCCGTTTTTAGCAGCTAT 9101 33 100.0 36 ................................. ATATAAAACACGCCGAGCGGGATCCATTCGGCAACA 9032 33 100.0 37 ................................. GCTTTGCCATCACGCTCAACCCACCCAGGCATGCGCC 8962 33 100.0 34 ................................. TCCAGATGGGCGCAAGTGGAGACTAGAGTGCGCC 8895 33 100.0 35 ................................. TCAATTTGTTACCGTAGAGGCTTTTTATCCTCTAC 8827 33 100.0 33 ................................. TGTATCCGGCTTCGAGCGTTCAGCCTCGTCAAT 8761 33 100.0 32 ................................. CCTCCCAACTCAATTCTTGATACTTAGTCCAA 8696 33 100.0 37 ................................. AACTGCTCATTGAAGAAGTTCGGACTGGTCAGTAGTT 8626 33 100.0 0 ................................. | ========== ====== ====== ====== ================================= ======================================= ================== 28 33 99.3 35 GTCGCACTCCGTATGGAGTGCGTGGATTGAAAT # Left flank : GTCCGGGAATGTCCGGGAATGGGTCTGGGACTGGTATGAAGATGATATTATAGAGAGCGGTTACTATCGCATCGTGCGGGGCGGCGGCTGGATCGGCGATGTGGTGAACACCGAGATATCGATTCGCGGCAGATTCGAAGCCAGCGGCCTAGGTCCCGATCAAGGTTTCCGCTTGGCGCGCAATGCTTCCTAAGTAATAGGATTTAGGGATGATGCAGATATTCAACAGGGTTGAGCCGTCGATCAGAGTGGTTCCTATAAGTTTCTAGATAAAAGATGAGAGGGTATGATCGCAATTCTGTAATCTATCATGAATCCCTCTCTTTATTCTGGTGCGAACCCCAAGTGAACATGAATTCCCTGGGAGGTTCGCACCCCGCGCCGCTCTAAGGAAGTCGGCGTTTGGTGTACCAAAATACAGGAAAATATAGTACACTAAAAACAGGTTCGCACTTTCGGGTCCGGGAGACCTTGAGGAACGAGGGCTCTCAGCCCCGGCT # Right flank : TTCGCCGAGGCAGCACGTTCTTTGATGCTCTTTTGTCGCACTCCGTATGGAGTACTGTTTAAGGTCAAAATAAATACTATTTTTGCATTTCTGCGCATTTTTACATCGCACCCTAAATGGGTGCGAGTTTTTTGTATTCCGAACTATAACTTTTTATAAATTATTGAAGTTTCTCTGATTAATAGGAGGATATAGGAAAATTGGCGTAGAATCTATCAAAAGAACTAATGTAAGAATGTGTTGCTAGTGGAGGGCAGATATTATGCAACATATGTCACTTGAAAATTCAAAAGAGAAAGCGCTGCAATCCGAAAAGACAAAAGACTGTAAACCAAATAAAGACGTAATTGTGGATATATATAAGAACTATCGATATATAGAAAGTTCCATAGTAAATCAACTTTATATGAGAGTTGCAGTGCATTCGGGTATGACGGGGTTTGCTCGTGAAGATGTATGGTCTCAACTTTTTGAAATGATCATTCCTAAGAAGTTCGTCA # Questionable array : NO Score: 9.22 # Score Detail : 1:0, 2:3, 3:3, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCCGTATGGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [9,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-6.00,-6.20] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [50.0-36.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,4.5 Confidence: HIGH] # Array family : NA // Array 1 30-609 **** Predicted by CRISPRDetect 2.4 *** >NZ_BMAQ01000008.1 Paenibacillus sp. DA-C8 sequence08, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ===================================== ================== 30 33 100.0 35 ................................. CACTCTTTGCTGTCATAAAATTTCCGTTTTTGTTC 98 33 100.0 37 ................................. CAGGCGGTCTTAATGACATCTGAGGTAAGAGCCTGCA 168 33 100.0 35 ................................. TCAGATGATAAAGAAAACCGTTATATATGGAAAAC 236 33 100.0 37 ................................. TAAAAACCATGAATGATATCGTTAAACGCAATTTAGA 306 33 100.0 33 ................................. GCTGATCGGGTTGTCAAATGAAACCAGAACCAG 372 33 100.0 34 ................................. GGAAGAAACCAGCGTACAAACCAGTACAGGTACC 439 33 100.0 35 ................................. AAGCATGTTGTCAAGTGTGGTGTAAGTCGATCTAA 507 33 100.0 37 ................................. CGTGATAGATTGGCACTTGGTGAGATGACATGGCAGT 577 33 97.0 0 ...............A................. | ========== ====== ====== ====== ================================= ===================================== ================== 9 33 99.7 36 GTCGCACTCCGCACGGAGTGCGTGGATTGAAAT # Left flank : ATCCCCGGCTTGTCGCTCTGTGGATTGTAG # Right flank : TCGGCGACCGCCGCGCACAAATCCGCCGACGAACGGTCGCACTCCGTATGGAGAGCCCGCTTCGGTACACTCCATACGGCTCTAACTCACTTCTCATGCAACGTGAGAAACTTTAGCTTCTTATGTCGTCTTGTTTAGAATCGCATTTATATCAGAATCATTGTGCCAACGATTACAACACAACGAATTCATGGATATCAATTCGAAAACCAAGCTAAATCTTAAAACTCCCCAGAAAGGGGTGTTTTTGACATATTCGCGAAAATTCTAACTAGATATGATGACTTTTGTCGCCAATATGGTAAAATAAAACTAATTATCCATGAGCAAGAGGGGATGACGGTGGTCTATATTGCCCATGTTCGGGAGTACGACAAGGCAATCCAATCCGTGAGGGACCATCTGATTGGAGTATGCCATTTAGCTGAACGGTACGGAGAGAAGCTGGGACTTCGATCTGTCGCAGGATTAGCTGGTCTGCTCCATGACTTAGGCAAGTA # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCCGCACGGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [7,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCTCTCCTCACGGAGAGCGTGGATTGAAAT with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-6.70,-6.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [21.7-30.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 9127-10245 **** Predicted by CRISPRDetect 2.4 *** >NZ_BMAQ01000008.1 Paenibacillus sp. DA-C8 sequence08, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ===================================== ================== 9127 33 100.0 34 ................................. GCATCATTTGACGATCACTTCCAATCCGTTGCCC 9194 33 100.0 33 ................................. GCTTGTCCATTGCTCGAAGCTTTGCTGCGTTTT 9260 33 100.0 33 ................................. ATCACTGTCTTTTTCATTCGTCCATATGGTAGT 9326 33 100.0 37 ................................. AGATGATAATAAACGTTGCTTATCGAAATCCCTAGGA 9396 33 100.0 34 ................................. CTTGTCGAACAGAACTTGTCTGCCTTTCTGAATA 9463 33 100.0 37 ................................. AGATACTGCTGACCGCGCTTTTCAGCTTCTTCGAGCT 9533 33 100.0 33 ................................. TCGATGAATCGTTGGAGCGAACATGTAAACAAC 9599 33 100.0 34 ................................. GACATGTCGCGAATTCCTTGCTCCAGCTGAGCAA 9666 33 100.0 37 ................................. AGATGATAATAAACGTTGCTTATCGAAATCCCTAGGA 9736 33 100.0 35 ................................. CAGATTTAGAAAGTCTGAAAGCAAAGGACATGGAA 9804 33 100.0 35 ................................. CCCCGACTGATGGAGGATAAGGGTGCGGATCGTCA 9872 33 100.0 34 ................................. AAAAAGATCAGCAAGCATAACGAGCCGGCATTCC 9939 33 100.0 36 ................................. ATTAGTGCCGTCATCAAGTGGATCTTTCCGAGTTCG 10008 33 100.0 35 ................................. TTTGATCCACTCCACGGTCTTAGGTACCGCATAGA 10076 33 100.0 34 ................................. CCAACGGTCAGATAAATGATCGGCTTCATAATCA 10143 33 100.0 36 ................................. ATTTTCCGATACAACATTGCTGGTACGGAATTTCTA 10212 33 100.0 0 ................................. | T [10243] ========== ====== ====== ====== ================================= ===================================== ================== 17 33 100.0 35 GTCGCACTCCGTATGGAGTGCGTGGATTGAAAT # Left flank : GCCATTTCTATGGAAGTAGATGAGGGCAGGTGATGGAGTGTGTTGGTGCTGATTACGTATGACGTGCAAACTTCCAGCCCAGATGGAGCCAGGAGACTGAGAAGAGTGGCGAAGGTTTGTCAGAATTATGGGCAGCGCGTACAGCATTCGGTCTTTGAATGCATTGTTGACGCAGCACAGTTAACTAAGCTAAAGCTAGAACTTATGGAATTGATCGATCATGAAAAGGATAGCTTACGAATCTATCGATTAGGGAACAAGTATCGAAACAAAGTGGAACATATCGGTGCGAAACCTGCTTTGGATCTGGAAGGCACCTTGATCTTCTAATGGTGCGAACCCCAAGTGCACATGAAATCCCCGGGAGGTTCGCACCCCGCGCCGCTGTAGGGTTTGTGGCTTTTTTGATATAAAATCAAAGGAAAATATGGTATCCTAAAAAGGGGTTCGCACTTTCGGGTCCGAAAGGCCTTGTTGGACAAGGACTCTCAGATCCGGCT # Right flank : TAATGCCGAAATGGAAGAAACATACAAACCCCCATCCCATTCACCACAAAAAAATCCCCGCGAACAGGATGCTTTGATATCGCGGAGATTTTACGTTCCGTTATTTTTTACTTCGTTTCTCTTTTTTTGCTTGAAGCAATAACGATCTGCAAATTTCAACTATAATCAATGCTATTGTGAGAGTAATTTGCACCATATATGCGTCCCCAAAAAGCTTGAGATTATGATAGACAAACATTCCCCTTTCAAGAACTTGCTGCTACTGAACAGATGAAACGAAATAAAGCAGCCCCCCAACATCTGTCGAGGGGCTTTATTATGTATGTACGAAGCATGACAACTTATGATGGTGTTCGGTGCGTAATGGCGATCTTGCCATTCCAACACAAACCTCAGCAGAGCGAACTGCCTTGTCGCAGGACAGGCGGTTCCGTCCGCTGAGGTATTTTTTGCGCATATATAAGCAGGCTGTCTCCTTCTCAATGCCTCCGCCGTTTGGC # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCCGTATGGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [7,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-6.20,-6.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [43.3-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.64 Confidence: HIGH] # Array family : NA //