Array 1 5546-6130 **** Predicted by CRISPRDetect 2.4 *** >NZ_MUAV01000038.1 Rhodovulum viride strain JA756 NODE_38_length_15413_cov_38.5529_ID_75, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ================================== ================== 5546 37 100.0 33 ..................................... CCACGTCCACCGCTTGTCCAGCACCCCCGGCGG 5616 37 100.0 32 ..................................... GGCCGAGGAGGGCCGAAGGATGACGGACCAAA 5685 37 100.0 34 ..................................... CACGACATAGTCGCAGGTCCAGTCGGGCTCTTCG 5756 37 100.0 31 ..................................... TCGCGCTCTGTCGCGTTGTGAACCACGATCT 5824 37 100.0 31 ..................................... TCGCGCTCTGTCGCGTTGTGAACCACGATCT 5892 37 100.0 31 ..................................... TCGCGCTCTGTCGCGTTGTGAACCACGATCT 5960 37 100.0 28 ..................................... CCGAAGTTTTCATCTCAGCCTTCTCCAC 6025 37 100.0 32 ..................................... GCGCCAGATGGAGGGATACGATGCGCCGCTTG 6094 37 89.2 0 ........................C.....A.T..G. | ========== ====== ====== ====== ===================================== ================================== ================== 9 37 98.8 32 GGCTGAAGACCATGCCCTCGTGACGGGCAACTGCACC # Left flank : GTCCGGTCAGGTCGGCCCAGATCGCCTTGCCCAGCCTCTCGCGGAACTTGCGCTGATAGCTTGACGGTTTGTCCTTGCCCTTGGGCTTCTTGGCGATCTTGTCCATCGCCGAGGCCCACTGGCCTATCACGGCCTCCGGGTCCGAGAGCAGGAAATCGGGAATGTTGCGTGCCGCCGTCTCCATCTTCAGGACGATCTTCCGATCCGAAAGGGAGGTCTGGCTGCGGCCGAATTTCTTGACTATTGGCATCTGAAAACCCTTCGCAGAATATGCCGTAGCGTAACAAATCGTAAAGTTTCGCCAAGATTTTTTGCAGTCAGGATTGACAATGAACCGAAATCAGCTTCGGAAATGCGTGCAAATTGCTGAAGTAAAAAACAAAATTCGTGGTCCTTGGGGGTATATCCGGCCTTGCGCGATGTGCTTTGGCGGCAGATTGGCTTCAGGTTTGGAAAGGCGCCATATTTGTGCTATGCAATCAAAGGCCTCCAGAAGGTGA # Right flank : CGCAGTTCGGACGGTCACAACCGCCGAACATGCCATTCTGCGCAAATGCCGAGGCGGCTGCGTCAACCGTGCGCTCCGAAAACCCCTTGTGGACTTTTGTCCCTTATGCCTTACTTTGAGGACAAAGGAGGTGCGCCATGCTGCAACCCGTGGAGTTTCAGGAAAGCCCTGCGCCAAGCGCAGGCTATTCGCCGGACGAGACCGTCGCCCTTCAGCGCGCGGTCATCAACCTCATGGGGCGCTGGGGCGTCCGCGACGAGGACGCAGCGACGCTTCTGGGTGGCCTGTCGGTCAAGACTTACCGGCGGTGGCGCTCAGGCGATTACGGCCGCGTCGGTCGCGACCTGGCCGACCGCATGTCGAATCTTCTGGGGATCCACAAGGCGCTGCGGATCCTGTTTCAGGACCCCGCCCGCGGATACGCTTGGGTGACCAGGCCGAACGAGGCTTTCGGCGGCCGGTCGCCGCTTGACGTGATGCGGCAAGGCGGCATGGGCGAC # Questionable array : NO Score: 3.20 # Score Detail : 1:0, 2:0, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGCTGAAGACCATGCCCTCGTGACGGGCAACTGCACC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-7.80,-8.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [51.7-36.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0.37 Confidence: MEDIUM] # Array family : NA //