Array 1 15775-17651 **** Predicted by CRISPRDetect 2.4 *** >NZ_CAJETC010000020.1 Staphylococcus pseudintermedius isolate 18S02019-1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 15775 36 100.0 29 .................................... TAAAACTGAGTTGTTTTTGTATATTAACA 15840 36 100.0 30 .................................... TTTGAAAAAGAATTTAAAAATATACCCAAC 15906 36 100.0 30 .................................... CAGAAGTAACGATTCTATTCGTAACATAAT 15972 36 100.0 30 .................................... TTATTTACTCCCTCTCATATTGATATTTAC 16038 36 100.0 30 .................................... AGAAAATCAAAAAGTTACTGATGAATTGTT 16104 36 100.0 30 .................................... GCATAATTTATGGTAAGCGTAAAACACGCA 16170 36 100.0 29 .................................... CCATCGCCCCCAGAACCACCAGCACCTTT 16235 36 100.0 30 .................................... AGGATTTAACTTCATTAAGTAGTCAAGTAA 16301 36 100.0 30 .................................... CTAATGGCTTTCCTTCGTAATTACCTACAT 16367 36 100.0 30 .................................... CAGGTCTCATGCGACAACAACTTAATTTTA 16433 36 100.0 30 .................................... AAAAGAATAGTTTGATTAACGCATTTACAC 16499 36 100.0 30 .................................... TTGATATCAGAAATCAGAACATTCAAAAAA 16565 36 100.0 30 .................................... TGAAAAAGTCATAGCATTATAATCAAAATT 16631 36 100.0 29 .................................... TTAAATTCTGGTGATATTATTACCTACGA 16696 36 100.0 30 .................................... TCACTTATCTGATGCTAAAGGTGAGTTTGT 16762 36 100.0 29 .................................... AACTGTCAATAATACCCCCTACAAGATGT 16827 36 100.0 30 .................................... GACGAAGAACTTTATGTTTTGAAATACAAA 16893 36 100.0 30 .................................... ACGATGAATAACCTCTTGTACACCACCGCC 16959 36 100.0 30 .................................... GGCGCCTTAACGTTCAATTAATATCAATAA 17025 36 100.0 29 .................................... TTGTGAAGGAAAAATCGACTTCACGTTGG 17090 36 100.0 30 .................................... GACTTGCGGTGAACGTTGAATATCTTTTTT 17156 36 100.0 29 .................................... AGACATACTAACTAAAGTGAAAGAGGTGT 17221 36 100.0 29 .................................... AGAAGCTATATTCAAGCAAATTATTGATA 17286 36 100.0 29 .................................... TGATTTTTGGTTAGGTCAACTTATGACAA 17351 36 100.0 30 .................................... AAAGAATACTATAAAGAGCAAAGTAAATAC 17417 36 100.0 30 .................................... AATTATCGATGTCATTCAAAATGGTGGACA 17483 36 100.0 30 .................................... GTAAACACTGTTTATCATGTTGAAGTGGTC 17549 36 97.2 30 ............................A....... GTTATGATGTTTGGCGATATGGGTCGTCGT 17615 35 86.1 0 .........T................-.CA.C.... | TC [17648] ========== ====== ====== ====== ==================================== ============================== ================== 29 36 99.4 30 GTTTTAGCACTATGTTTATTTAGAAAGAGGTAAAAC # Left flank : TTTTAATTATATTATTTCCGGAATCACATCTTGGCATACACGATATTAAAAAGTTTATACACCTTATAAAGAGATATAAATTTACCACGATTATTTTCACTAATCATCCTTCTATCATTATTAACGAGGAAAACATATTTCTTTGTAAAAGTAATAAGAAGTGCCACGACATCGAAAAAATATATGAAGAATTAATGTTATTTGTTCCTGAAGAAGTAGTGAGTCATCAATTAGTTAACATGATTGCATATCACGAATTCGTTGGTGAAAACCTTTCCGAGTATGAGCGATATTTTAAGTTTATCAATCATTACAATTAGGCTATACTATATTTAACATTATATGATAGAGAAAAGTTGATCCAACGATGAAGTAATGACTATGTGACTTCATTCGTGATGAAGAGTGTTAACTTTATCATCGAGTATCATATCTGACTTCTTTTAATAGTGCTAAGCCTCAATTTTGAAAAGGATTGAGTTAATGTTTTTGGATTTGAG # Right flank : CCTTCTTTATAATCGTACATCAACCTCACTATGCTTTCAAAATAATTAAGAGGCATTGTGGGCTTTTTGTGTTTATACGAAATGTTGTATGAATCTCTCAATCGTGCCACCATGTTATAATAGGTATAAATTGTTCATAAAAGATAAATAGAAAGCAGGGGAAATCTATGGAAGCAATTATTGCAACTCAACCGTTCCAATTAGCAGAAGGTCAAAAGTTTGAAAAAGTATCGCGTGAGCTCCCAACACCAGAGGCGCATGATATTTTAATCAAAGTGTACGCAACAGGGATCAATCCGGTTGATACGAAAATGCGGCAAGCCCCGTTAAATGCTGAGGCACGTGTCCTAGGTTTTGATGCGGCAGGTGTGGTTGAAGCGGTCGGCGATGCGGTTACGGATTTCAAACCGGGTGACCGAGTATATTATTCAGGATCGAATCAACGAGATGGCTCAAATCAGACGTATCAGCTCGTGAATGAAAATTATTTAGCGCATATG # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGCACTATGTTTATTTAGAAAGAGGTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: F [matched GTTTTAGCACTATGTTTATTTAGAAAGAGGTAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.20,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //