Array 1 131673-130607 **** Predicted by CRISPRDetect 2.4 *** >NZ_NESP01000002.1 Limnohabitans curvus strain MWH-C5 LimA-MWH-C5-C2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 131672 29 100.0 32 ............................. ACGTTTATGCACGCTTCGATCAATGAGCCTAT 131611 29 100.0 32 ............................. AAGGACAAATTGGTGTCGAAAGCGCATCGTCG 131550 29 100.0 32 ............................. GCTAAGAACAGAGCGCAAAAGTGCGATCCAGC 131489 29 100.0 32 ............................. TGCCCCCACTAGCCGTACCACTGAATTAGAAG 131428 29 100.0 32 ............................. CTGTCCCGTTGTTAGCCGCTCGCCCTGTTTGG 131367 29 100.0 32 ............................. GAAGAAGCCTGCGCCCTGTTCTCTTGTCGCAG 131306 29 100.0 32 ............................. ACGAAGTTGCAGGCCAGAAATCGAAGAAGCCT 131245 29 100.0 32 ............................. AGAAGAGACACCGATCAAAGCGCAAGATTTAT 131184 29 100.0 32 ............................. TTCACCAACTTCGAGCGCAAGGCAATTCGATG 131123 29 100.0 32 ............................. TGCGTGATTGGACTAATCATTTTTCGAACCTC 131062 29 100.0 32 ............................. ATAGCTCGAAGAACATTGGAAGAAGGGTGACG 131001 29 100.0 32 ............................. TGGGGCGACTGGTTTTATTTGCATGCGGAGTC 130940 29 100.0 32 ............................. ACAGCGGAGAACAGCGACTCTCTATCGGGGAA 130879 29 100.0 32 ............................. CATTTTCTTAGCTGTTCGCGCCGAATGTCTGT 130818 29 100.0 32 ............................. AAGATTGAGCCGGAGCGGGTTTGGACTTTCAG 130757 29 96.6 32 ............................T TCGCACGCTGGACTGACCCGCTGACAAGCCAC 130696 29 100.0 32 ............................. TTGAATGCTCTTCGACTGCGGCGACAAGACCA 130635 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 18 29 99.8 32 GGTTCCCCCGCGCATGCGGGGATAGGCCC # Left flank : AGCAGAGCGAAAAATCTGGGGAAGTTATGGACCGCGTTGTGCGCCGTGAAGCGGCCCGTGTTTTCCGTAAAGAGTCGGTCATTCCATCCATGATTGACCGCATCAAACAAGTATTACGCATGGACGAGGTGGCGCATGGCGCTGGTGACGATAGTGACACGTGATGTGGCCGACCGCTTTCGTGGTTTCCTGGCATCTGTGATGTTGGAGGTGGCGCCGTGCACCTATGTCAGCCCACGCATGAGCAAAGGCGTGCGCGAGCGTGTGTGGCGTGTGATGACGGAATGGCACACCACAGAACCACGCGGCAGCATTGTCATGATTTGGCGCGAAAGGGAGGCGACGGGAGGTGTTGGTTTGGCGAATTTGGGGACGCCAGCCAAAACTTTGATTGAAATAGATGGCATGTGGATCGCACGTGCGGGCGGTTGAATTTTGCTCTTTAAAAATTGGATGTGAACATTGGAATTCTTTTCTGGATCAAGGACTTATGATCAAGA # Right flank : GTGCGTTTTTTGAGCCACCCTTATTCAAAGCTTGGCGCGCCGCGACAATTTGCCCGAACTGTTCAGCTAATACGGACAGGTGATCATTGATGAGGCGCATCATCTAACCGCAGAAACATTCGAAGCAGTTTTGAAGCAAGCCAGCGCACGCTTCATTCTCGGGCTCAGCGCCACACCCGTTCGCAGCAATGGGCATCATCCAATCATCTTCATGCAGTCAGGTCCCGTCAGGCATATTGCAAAACGCCCGGCACACGTCCCTGATCAGCTATTGGTTCGGGTCCAGCCTCTTCCGACTCCGTCTGTTCCACTGAACGCCAGTATCCAAGAGGTTATTCGGCTATTTGCTGAGGACAATGATCGAAATACACGCATCGTCGCCGACGCGACCAATGCCCTGGAAAACGGGCGCAAGGTGCTGCTACTGACCAAGAGAACGGAACACCTTGACCTGTTGCACACGCAATTGGGAATGTCGGCTACCCATGCTTCATGTTGCA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGTTCCCCCGCGCATGCGGGGATAGGCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [46.7-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,1.05 Confidence: MEDIUM] # Array family : NA //