Array 1 45148-47619 **** Predicted by CRISPRDetect 2.4 *** >NZ_VSUQ01000003.1 Ligilactobacillus salivarius strain FWXBH25_3 scaffold3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ================================================================================== ================== 45148 36 100.0 38 .................................... TNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN 45222 36 100.0 30 .................................... AGGTTCTCTGCTTGCCGAATGGCCTTAAAG 45288 36 100.0 30 .................................... TGCTTTGCGACCAGAAAAAGCAACTCCACA 45354 36 100.0 30 .................................... GTGATGGAAAATGATCGAACTAACAACCGC 45420 36 100.0 30 .................................... GAGTATTCAGTAATGAACATGCGGGGGATA 45486 36 100.0 30 .................................... CATTGAGAAATCGTAACTTCCTTGGCGGTA 45552 36 100.0 30 .................................... CTCTATTTTAAAAGAAGAGCTTGAGAGTAG 45618 36 100.0 30 .................................... ATATCTTCTGTAATCTTGATAGGCTTTATA 45684 36 100.0 30 .................................... CGTAGGTGATGGTGGACCCATAACCTTGTG 45750 36 100.0 30 .................................... TGTCTGTCCATTGCTTGTATCCTCCGTTAG 45816 36 100.0 30 .................................... TTGCTGCAGAGTTGCTATTGAATGATATGT 45882 36 100.0 30 .................................... TTAGGCACTAGCAACTTACCCCCACATTGT 45948 36 100.0 30 .................................... AGTAATCAGTAATTGGGCTAATTACGTTGT 46014 36 100.0 30 .................................... ACGTGTAACTGTATTGTAGTGATGCTGATA 46080 36 100.0 30 .................................... ATATTTTCATTCATAATCAGCTCTCCTTTT 46146 36 100.0 30 .................................... AGAAACTAAAAATTACATCTGGAGTAAAGA 46212 36 100.0 30 .................................... CGAAAGACGCCTACGCTCAAACGCCAGCCT 46278 36 100.0 30 .................................... CATATATAGACAAGTTTTCAAATGCCCCAG 46344 36 100.0 30 .................................... CACGGTGGCAGCTTGTCGCTTGTCTATACG 46410 36 100.0 30 .................................... AAACCTACAAGCCTAGATACTGAAGAAACA 46476 36 100.0 30 .................................... TGTTCAAAACGCGATAGATGCAGCTATCAA 46542 36 100.0 30 .................................... AGACGGTAAATTTACTGTTACTGTTGATGA 46608 36 100.0 30 .................................... AATGACAACTCTAATTGTTGGGGAGGGTTA 46674 36 100.0 30 .................................... AGCAATCCACATCCTGTGGTTATACTTGCT 46740 36 100.0 30 .................................... TCGGTGGTGAGAAAAGTGTTGCTGCAACAT 46806 36 100.0 30 .................................... ACCCTGGATTGGGGACCAAGAGGGGAGCTT 46872 36 100.0 30 .................................... ACCGACAAGCGCAGGATTTAGAGCGAGTCA 46938 36 100.0 30 .................................... GCGATAACTTGACGATTGATAGCCCTACTA 47004 36 100.0 30 .................................... AGCCATTACGATTGTAGCAACTGTCGAACT 47070 36 100.0 30 .................................... CGATGGCACTAACGTCATCGCACTATCCAA 47136 36 100.0 30 .................................... AGATGTTTTAACGTTTATCAACTACAACAG 47202 36 100.0 30 .................................... GTATGCAAATCTATAATGCTGCTTATTATA 47268 36 100.0 30 .................................... TGCTTTTTCATGGTTTTGGTTCGTTCACGC 47334 36 100.0 30 .................................... TTGCTGTCTTACACCTATGTCAATTCAACT 47400 36 94.4 82 ........................A..A........ ACAACTGGAGTTTGAGTACGTTTAGCTTGTGTTTCAGAAGTATGTTAAAAACCTATTATATGTTATAATATGAAAGTGTTTA 47518 36 83.3 30 .....G....T.........T.........G.T..T AGTAATTCACCGCTAGTTAAGTGGTTTTTT 47584 36 80.6 0 ..........A.........T...AG...CG..G.. | ========== ====== ====== ====== ==================================== ================================================================================== ================== 37 36 98.9 32 GTTTCAGAAGGATGTTAAATCAATTAGGTTAAGACC # Left flank : AACAGACCGAATTAGTAAAAAGTATATGAATGTATTAATTAAGAAGATTATTGAAGACATCACAGACGATGAAAGACAAGCAATACTAAAATCAGTAAATAGTTTGTATGATCGTATTCGAGAGGTTTTGTATAAAATTGATATACCATTACAAGTAGATTATGACAATGATTTAACAAGACTATTTAAGTATTGTCAGGTACATACAGAGGCATTGCTATGGAAAAATGCGTATGATAGAATATCTTCAGATGTTAAATTGCATGTGGAACTAAATAGAGAAAGAATTATAGGTCTAACCAATGTCGCACATTATCTCACTAAAGAAGAGTTTCAGGAACTTGTAGGTCTTGTTAAGGCGACTAACTCATCAATGTTTATAATTGAATTCACAGAAAAGAATGGTCAGAGATTCTTTGAAAGCTGTGATAATTACTACATTGATGAGGATTATATTGATTGGTACTAACGAATCGTTAAATTTTGATTATAAAGTAACG # Right flank : CTAAAATACAAAAAATATTTCATAATATTTATAAATCTATCAGAAATTTTCTGGTAGATTTTTTTAGTGTAAAAATTTTTGAGTTTAAGATATATTATGGTTGATAATGTAATATTATATGATATATAATATAGTTGAAGATGAGATATAAAAGAAAGTGAGGGATGATGATGAAAATTCAAGTTAGTTCTGATTTACTAGATGGTTTAGTATTAGCGCTTTTAGATAAGCAAGATTATTATGGATACTCATTGACACAGGATATGCAAAGAGCAATTTCAATTTCAGAATCAACACTCTACCCAGTATTACGAAGGTTAAAGAATAATGGTTTATTAGAAACATATGATCAATCATATCAAGGGAGAAATCGTAGATATTATCGCATAACAAATAGTGGGGAAGAACATTTAGGAAGAGTTAAAAAAATGTGGAGCGACTACAAAGTTAGTTTAGATTCAATTTTCGAAAAAAACTAGGGAGGGGGAATAATAATGAAC # Questionable array : NO Score: 6.11 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:-0.09, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAGAAGGATGTTAAATCAATTAGGTTAAGACC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.70,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-15] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [73.3-85.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.27 Confidence: LOW] # Array family : NA //