Array 1 26992-26656 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_AJVJ01000056.1 Nitrosopumilus sp. AR contig11597, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence          	Spacer_Sequence                             	Insertion/Deletion
==========	======	======	======	=========================	============================================	==================
     26991	    25	  96.0	    44	....................G....	TGCGTTTAGAAGCAGCCTTTCTCTTAGGTGCTGCTTTTCTTTTA	
     26922	    25	 100.0	    44	.........................	TTTTAGCTGCAGTTTTTCTCTTTGGAGCGGCTCTGCGTTTTGCT	
     26853	    25	 100.0	    44	.........................	TTCGTTTAGCTGCAGTTTTACGTTTTGGAGCGGCTTTTCTTTTA	
     26784	    25	  88.0	    26	.....T........A..T.......	TAGCTGCATTTTTCCTTCGAGTTGCT                  	Deletion [26734]
     26733	    25	  84.0	    29	..............AC.T......G	CGGCTTTTAATGCTTCAGCTGCTGCTTTA               	
     26679	    24	  84.0	     0	.....A.........C...T.-...	|                                           	
==========	======	======	======	=========================	============================================	==================
         6	    25	  92.0	    38	GCTGCCTTTCTCTTTGGAGCTGCTT	                                            	       

# Left flank :   GGATGAGAAAGTAATCAAATTATTTTCAGAAAAAAACTTGGTCTTTATTGCAACTGTCATGAAAGATGGTTCACCACAGGTTTCCCCTGTTTGGGCAAATTACGAAGATGGATACGTGCTGGTCAATACTGCAGAGGGTCGAATAAAACACAAAAATGTTTTACGTGATTCGCGAGTTGCAGTTTCTGTTGTTTCAAAAGACAATCCACTTGACATGACAACCATTCGTGGTGTTGTAGAAGAGTTAATTCCTGATTATGATTACAAACATGCAGACAAACTTACACAGCAATACATGGGACGAGAACACTATCCTTTCAAATGTGATGATGAGAAAAGAGTAATTCTAAAAATAAAACCTAACAAAGTTTTTGTCTTGCCTGAATTGAAGATGAACGAGTAGCAATTTAGAATATTTCTAAACTCGAATTTAGAAACATAATACATTCAGTATGGTAAATAGAAAAAAGATAGCATAGACAGCTTAACGTCGACGTTTA
# Right flank :  GCTGCTTTTTTAGCTGCTTCGGCTCTCTTGGCTTTGGATACTGCCATGATTGTTTGCAAAAATCATCGGTGTTATATGGTAAAAGTCACACATTACTACGCAGTATATAGAAAAATTTGACACATTTTTTGTTTTTTTGAAAATTACGATCAGCAATTTGTAATGCAAATCAAAGCTGTATCGACAGTTGATTGATCTTTTTGCGGACGAATAATTATTTTGTATTGTTTCTCTTCATCAAATGGAATATCAAACTGTGTTGTTCTTTCAATTGATTGATCGGGTTCTAACCATTCTAAAAGTAGGTCTTTGGATGAAAATTCTCCGTAAACTGCTTCGTGTTTCTGCTCTTTTTCATCAACAATGTATAATTGTCCTCCTGAAAACAGAGTTTTTTCATCACCAATGTTTTTTGCAGTGATCCCGATCATTACAAACGTGTTTTCAGGTGTAACTTGCTTGCTTCCTTCATGTGTTCCCTCAAAAGTTACCATATATTC

# Questionable array : NO	 Score: 2.50
# 	Score Detail : 1:0, 2:0, 3:0, 4:0.60, 5:0, 6:0.25, 7:-0.04, 8:1, 9:0.69,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GCTGCCTTTCTCTTTGGAGCTGCTT
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     F [11,1] Score: 0.37/0.37
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  NA [-1.20,-1.30] Score: 0/0.37
# 	Array degeneracy analysis prediction:      R [8-1] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: R [55.0-68.3]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.37,0.68   Confidence: LOW] 

# Array family : NA
//