Array 1 65786-69244 **** Predicted by CRISPRDetect 2.4 *** >NZ_AXLL01000002.1 Deinococcus wulumuqiensis R13 contig2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ============================================ ================== 65786 37 100.0 36 ..................................... ATTCATATCTCCACCCACGCCGAAGGAAACGGCACG 65859 37 100.0 36 ..................................... TGCTCCTCGCGCTGCTGGTCGGCGTGCTCGTGGGCC 65932 37 100.0 36 ..................................... TTCGGTCCCCGGCCGCCATGCAGCGCCAGGTGCTTG 66005 37 100.0 36 ..................................... CGGTGAGGCTCGCTCGCAAAAGGCCCTGAGCAAAGT 66078 37 100.0 35 ..................................... GACGGTCCAGTTCCTGCACGGCCTGTTCCACCGCA 66150 37 100.0 36 ..................................... ATTCATATCTCCACCCACGCCGAAGGAAACGGCACG 66223 37 100.0 35 ..................................... CCGAAGGCGCCCCGAAGATCATGTTCGTCTGGAAG 66295 37 100.0 36 ..................................... AGTGTCTGGACACCGAGCGCGGCACGGTGCGCGGCA 66368 37 100.0 36 ..................................... GTGTAGATGACCCACTCATCGCCGTTGGGCAGCACC 66441 37 100.0 33 ..................................... AGTCAATCGGCGTCTGGTCGAAGGCCAGAGCGG 66511 37 100.0 35 ..................................... TCTGCCATGTACGCGGCGTAACCGGGCGTGGCGGG 66583 37 100.0 37 ..................................... GAGGAACTGACGGGGCGGTTCGTGTGGGCGTCCCTGC 66657 37 100.0 38 ..................................... TGCCGCTGCCGGAAAAACCCCGGCCTGAGCCTCAGCCG 66732 37 100.0 36 ..................................... TGGTCCATATGGACACGGCCATCAACAGCGGGCCGG 66805 37 100.0 37 ..................................... AGTTCGGGGCTGAGTAGGGCCTGGGCTTTTGCTTCGA 66879 37 100.0 43 ..................................... CATGCCCTGGAGTCAGGCCTTCGTGCTGGCCCTGATCGCGTTC 66959 37 100.0 37 ..................................... GTGATTCGCGGGGACTGGGGGCGCCGGTGAAGCCCGG 67033 37 100.0 35 ..................................... TGACCACCACGCTGCTGCTGACCAACCCCGGCCCC 67105 37 100.0 35 ..................................... CGCCTCGGCTCCCGCTTCTCCTCCACCTTCTCCGG 67177 37 100.0 35 ..................................... GTCTCGCGCAGGATGATGTTCGGCTCCTTGAACGC 67249 37 100.0 35 ..................................... GTCTATAACCCGGACGGCACTCCCAAAATGGCCTA 67321 37 100.0 36 ..................................... AGTTCAAGCCGAAAGCGGCAGGTAGGTGTGAGAGGT 67394 37 100.0 35 ..................................... CAGCAGCCCGGAAATGAGGCGCGTGGGCTTAGGCA 67466 37 100.0 37 ..................................... GTGATTCGCGGGGACTGGGGGCGCCGGTGAAGCCCGG 67540 37 100.0 35 ..................................... GTCTCGCGCAGGATGATGTTCGGCTCCTTGAACGC 67612 37 100.0 35 ..................................... GGCACCAGTCGCTGATTTCTCGCTGGGAAGCAGAC 67684 37 100.0 35 ..................................... AGCCACGTCATCTTCTGGTGGCAGAAATCGGCAGA 67756 37 100.0 37 ..................................... GACTGACGCCGTAAACGTAGCCGGAATTGAGGGAGCC 67830 37 100.0 34 ..................................... GCTCAGGGCACGGTCATTCAGGGCAACGTGCCCG 67901 37 100.0 35 ..................................... AGCGCAGCACGCACGGCACGGTGCTGCTCACGCTC 67973 37 100.0 36 ..................................... CGCCATCATCGGGCCTATGGGAGTGACCACATGGCT 68046 37 100.0 34 ..................................... CCGAGTGAGCAGGTGCGCGAACTTGGGGCGTACC 68117 37 100.0 34 ..................................... CCCGCTCGGCCAGCGCCACAGCCTGGGCGTGTAG 68188 37 100.0 34 ..................................... CTGTTGCTGGCGGTGGGACTGCTGCCCTGCCCAA 68259 37 100.0 35 ..................................... TCCGCGACGGCGCGACGTGGCAGGAAGTCACCAGC 68331 37 100.0 35 ..................................... GCTCAAAAAGTGGGGCGACGAGACGCTAGACCTCT 68403 37 100.0 37 ..................................... AGTTGGACGAGATCCTCCAGGCGAACGAAAGCCTGAA 68477 37 100.0 37 ..................................... AGACGCTGCACGTCACCAAAGACGGCGCAACCCTCGA 68551 37 100.0 35 ..................................... TACCTGCTGTTCCAGGGCAACGCGAACGCCGCCAA 68623 37 100.0 34 ..................................... CCCGCGACGGCGAGTACATCGACGGCGGCGACAA 68694 37 100.0 35 ..................................... TGCGGCGTGCCATAGCTGTCGCGCTGGGTCAGCCA 68766 37 100.0 36 ..................................... GTCAGCGCAGGCTTGTTCATCTCGGCTTCGAGGTCG 68839 37 100.0 35 ..................................... CTCACGCCGAGCCATGTGCGGAGCCTCGCCCGGAA 68911 37 100.0 44 ..................................... CGGCAGAGGAGAGGGGCGGCAAGCGCAGGCCAAAGGCCGGGAAC 68992 37 97.3 35 .........G........................... GGTAGGGGAGAGGGCGCTTCGGGCATCGGGACGAA 69064 37 97.3 37 .........G........................... AGGAAACAGGGCTTGCGCTGCCTTCATCGCTTCGAAT 69138 37 97.3 33 ...........................C......... AGACAGCAGCGGCAGCAGCGAACTCCGGCGAGC 69208 37 94.6 0 ........A.G.......................... | ========== ====== ====== ====== ===================================== ============================================ ================== 48 37 99.7 36 GCCACATCGAAGAAGCCCAGCGTTAGGGCACTGAAAC # Left flank : CCCTGCTCGTTGAGGCCGAACTGGGGCTGACTTGCCCCTATGGGTACTGGCACTCGAGCCGCACCCGGCAAACCCATACCGTCCCCATAGATACCCGATTGCGAAGGCGTACCCTTCAAGCGATTGCCGAAGTGCGCGCTTTCATTGAGCTTGAGCGGTGCCCGCCTCCCACCTCAAAAACGGTAAAATGCTTGGAATGCGAACTGAGGAACTTCTGCGGAGATACGCTGTGACCCGTTCGCAAAAGCTGAGGCTGCACGCAGAGCCGCCTGATTTGCGAAGCGTTGTCACGGCAATTTTGCCGCTTTTCGGTGATGAGCAACCCAGAGATCCGCTCCTCATGGAAAATAAGAGTGTGTCAGACACACCGCAAATGGCCCTATCCAACGTCTCTCCTGTCATTTGCGACCAACATGGACAGGCTATACTTTTGCCGTGATGGAGGCATCACGCGCTACATGACAGCCCAAATGAATTTGAGAAAACGCGTGAAATAAGCG # Right flank : ACGAAGATCAAGAACCTGCGCCGGCCGCTGGCTCGTGGCTGGGCCGCTAGACCAAGGATTCGCTTACCCAGAATCGACCTGTCAACACGGAAAACAGCCAAGGCTTTTGTGCCACAGTTGTGCCACAGTTTTTCTGGAAAGCCTTGGAAAAAGCCGGAAAAAGCCAGACGCCTCACACGCAAAAACCCTCTCCCAGTGGGCGTTTTTGGAACATCACGGAAAATGCCGGAAAACCCGGATGAGTATTCGTAATCAGTAGGTCGTCGGTTCAAGTCCAACCCTCAGCTCCAAGAAAAAGCCCCGCCTAGCGCGGGGTTTTTGCTTTAGTGGTTTGCAGTAGGTGCGCCACCAAACGGGTTGTGCCACAG # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCCACATCGAAGAAGCCCAGCGTTAGGGCACTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [12,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-7.00,-7.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [51.7-36.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0.37 Confidence: MEDIUM] # Array family : NA // Array 1 42-5900 **** Predicted by CRISPRDetect 2.4 *** >NZ_AXLL01000003.1 Deinococcus wulumuqiensis R13 contig3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================== ================== 42 37 100.0 33 ..................................... AACGTCAAAACACTCGCCGACGCCTGCGCCTGC 112 37 100.0 34 ..................................... TCCGGTACGCAGACCATGCTGCTCATCACCTTGC 183 37 100.0 34 ..................................... TCGCGGTCCTCGGTCTGCCGCTGCGTCACGGCGT 254 37 100.0 35 ..................................... GCTCCCCCCAACACGCATCGGGGGTACCCCTCACC 326 37 100.0 35 ..................................... ACGCTAAATCTGGCAGGCAACCCGGCCTACTTCGT 398 37 100.0 33 ..................................... CGCAGCCAATCCACGTCCTGCATGGTGGCAGGG 468 37 100.0 34 ..................................... CCGATTGGCCGGTTCGCACCAGGTGGATGTTGTT 539 37 100.0 36 ..................................... ACCGGGACGCCTACCGATAAGCATGACGACCAAGTG 612 37 100.0 33 ..................................... TGTAGATGAGGCGTTGCAGTCCATGCTTGACGA 682 37 100.0 35 ..................................... ATCCGGTCAAGCTGAATCGCGTGGTCTGGGTAGAG 754 37 100.0 35 ..................................... CTGCGGGCATCGCCAAACAAGCCCGGCAACGCAAA 826 37 100.0 34 ..................................... CTCCGACAGTGACTCATCCTCCGAACGGTAGGAC 897 37 100.0 34 ..................................... CAGAACGGGTCTAGAGCCACCTCGCGCACCGCGT 968 37 100.0 33 ..................................... TCCTGAAGGACAACGGGCGCGGCAGGCAGCGGG 1038 37 100.0 35 ..................................... ACCGACGAAAACGGCAACCCCGTGGAAGCCGTGAG 1110 37 100.0 35 ..................................... AGTGCTGCTCAGTGCCTCGGCGCGGGCCTGCTCAG 1182 37 100.0 34 ..................................... ATACCGCACGCGCTCCGGCACACGCTGGGCGAGG 1253 37 100.0 34 ..................................... CTCTCCGATGAGGGCGGTTGGGATACCCCGTTCC 1324 37 100.0 33 ..................................... AACTCAAGGGCGTGAACGGCATGAACCAGACGA 1394 37 100.0 32 ..................................... AGCGCGTCGGTGTCGCTGACCTCAGTGCCGGG 1463 37 100.0 34 ..................................... AGCATTAGTCATCCATTGACCCTAAGAGCATGGA 1534 37 100.0 34 ..................................... AGCGGGGAGTGGCCTGAGTTCGTCGGGGTCAAAG 1605 37 100.0 34 ..................................... AGGCGGCCTTGCCGACGACTGCCGCCATCAGCCG 1676 37 100.0 34 ..................................... TTCCAGGAGCCGCACCGCCTCTTGGTCCAGCGCG 1747 36 81.1 33 ...........................C.-C..CGCT GGCCGGTGGCGCCCGAGATGTTCCGCCAGCGCG 1816 37 100.0 34 ..................................... GGCTCTGGAACCTCGGTGCAGGCGTCCTACTCGG 1887 37 100.0 34 ..................................... ACACGCGCATGGAAAACGCTACAGAGGCGGAACC 1958 37 100.0 34 ..................................... TTCTCGCGCCGCCGCTCAAGCTCCATGGCGGCTC 2029 37 100.0 35 ..................................... CGGCCCGGAGGCGCGGCCACCGAACGTCTTGAGCG 2101 37 100.0 37 ..................................... TTCGCGCTGGTGGTCGCGTGCGCGGTCAACTGCTGCA 2175 37 100.0 35 ..................................... TCCTGCATCTTGGCGCGGGTCTCGGCAACCATCGC 2247 37 100.0 35 ..................................... TGCCGGGGGCAGGTAGGGGCCGACCAGCTCAGCCG 2319 37 100.0 34 ..................................... CGGGCGAGTGCCTAGCGGCGAGCGCCTTCCCTGC 2390 37 100.0 35 ..................................... TCCTGGCACGCCCGAAAAGCTACCCTTCCTCTTTC 2462 37 100.0 34 ..................................... ATAGTTGACTAACCTCATAGTCTGCCCGCTGGGT 2533 37 97.3 33 .....................A............... CCCCGTTGCTCTGGGTGGAAAAGATACTCTGTT 2603 37 100.0 36 ..................................... TGGCAGTTCGAGGCGCAGACCAAAGCCGCCCGCGCC 2676 37 100.0 33 ..................................... CCCCGGACCTCCAGCTCCAGCCCCAGCACGTCA 2746 37 100.0 19 ..................................... ATTCGGCAAGCATACTGCC Deletion [2802] 2802 37 100.0 34 ..................................... CCGGCTGCCACGCCAGAACCACCAGATACCCGCC 2873 37 100.0 34 ..................................... ATAGCCTTCAGGCGTCAGCTTCTTCGCGCAGTCG 2944 37 100.0 36 ..................................... TGGTAAGCGACGCGCGCGCGATCTTCGCGGCGCAGG 3017 37 100.0 34 ..................................... CCTCAGTTGCCAGGGCCGTTAGGTCGCGCTGTAG 3088 37 100.0 35 ..................................... GACAGAGACCCCGTCCAGAGGACTCAGCGGGTCCG 3160 37 100.0 36 ..................................... ACTGTCGAGGCGAACGATTATGACGACGATCGCCGG 3233 37 100.0 34 ..................................... AGGGTCAGGGTGCGCTGGCCCTCGGCGTCGGCCA 3304 37 100.0 33 ..................................... ATCAGGTCAAGGTGCTCAGCCATGCGAGCCTCC 3374 37 100.0 33 ..................................... AAAGGCAGCCCCGAGCGCGTCCGCTTCGGCGGC 3444 37 100.0 34 ..................................... TCGCCGAGGCCTGCCTCGCGGTGGGCGACTATGC 3515 37 100.0 35 ..................................... TCTCTGATTCTGTTCTGAACTTGGATTTGGCCTCT 3587 37 100.0 34 ..................................... CATCGGGAGGAATGAACCCGCGGAGAGGTCGAGG 3658 37 100.0 37 ..................................... ACGATGTCGCGGGCAATGACCACCACAGCGTCACGGG 3732 37 97.3 34 .........................A........... ACGCCCTGGCTGGCCCGCATCGGCGCCCTGTTCG 3803 37 100.0 33 ..................................... ACCAATCCGATGCTGGCGGCCCTGGCACCGGCG 3873 37 100.0 33 ..................................... CCGACAGGCGACAGCGTGACGATGAACGCCGCC 3943 37 100.0 35 ..................................... AAATGGGGGCAGAATGACCAGGGGATTAGAACAGG 4015 37 100.0 35 ..................................... TAGCTACCGTAAAAACGCCCGCTGGCCGTGCCCTG 4087 37 100.0 33 ..................................... TCAGCTAGCCCGCGCAAGTGCCGCCCGCCTGGG 4157 37 100.0 34 ..................................... CCATGACGTTTGACCCGAGTGCCCTGCCCCCCAT 4228 37 100.0 34 ..................................... ACCGATACGGAGCTGTCCGCCGCTCTCCGTCGTG 4299 37 100.0 35 ..................................... CTGCATGATGCCCACGCTGAGGGTTGCCCTGTCCC 4371 37 100.0 32 ..................................... TTCCGAGAAGGGTTGCCACGTGTCGACCGCGC 4440 37 100.0 34 ..................................... CTCCGAGGGACGCATTCGCGTGCTTGTCACGAAA 4511 37 100.0 35 ..................................... TCAAGCGGATGCTTATCGGTCATGCGGGGAGTCTG 4583 37 100.0 35 ..................................... CCGCTATCCAGGGTAACGAGTCCCGTAACGGCACA 4655 37 100.0 36 ..................................... CTGAACACCGAAATCATGCCCGCCTGGGAGCGCGGG 4728 37 100.0 33 ..................................... AGCGCGGTCATGGGTGCCGCCTAAGACGCCCTG 4798 37 100.0 35 ..................................... TTGCGCTGCCCGTGCGCGGTGATAAGTGCCCCGAG 4870 37 100.0 34 ..................................... GCCGGGGGGTTGGCCGCCGGGTCAAAGACCGCGT 4941 37 100.0 34 ..................................... AAAACGTCGCTCTACGCCACCGCCACAGCGGTTG 5012 37 100.0 35 ..................................... CGTAACGCTCTCCGCGTGACACTGGAGACCGTCAG 5084 37 100.0 36 ..................................... TGAGCGACGACCAGACCACTCACGAGGTGACCCCAC 5157 37 100.0 33 ..................................... CTAGAGTTCCAGCGGCGGGGCGCTCCGCATCTG 5227 37 100.0 34 ..................................... TGCCGCCACGAGTCCGTGGGGAGCGCCGAGGACG 5298 37 100.0 33 ..................................... TGTAGATGAGGCGTTGCAGTCCATGCTTGACGA 5368 37 100.0 34 ..................................... CGGCCCCTAGAAGTCGCCATCGAGTACACGACGC 5439 37 100.0 33 ..................................... CTCGAACTGCCGCTCAGTCTCCATGCCGAGCAT 5509 37 100.0 34 ..................................... CCAACCTGACCAACGCTGTGAACGGCAACACCAA 5580 37 100.0 34 ..................................... CTCTCCCGAAATCGTGGCGGAGAGGGTGTCGTCA 5651 37 100.0 34 ..................................... GTCTCAAAACGTGTGTTTCGGCAGGGACACAACG 5722 37 100.0 34 ..................................... AAAGGGCGAGCCGTGATGATGCTTGAGCAGGTAT 5793 37 100.0 34 ..................................... CCTGCCCCCACGCCCTGTGATGCCCGCCAATTGG 5864 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ===================================== ================== 83 37 99.7 34 GTTCCGCCCGGCTGTGCGCTGGGCGGTGGATTGAAAC # Left flank : ATTGAAACCTCCTGGTGGCTCAGGCAGCGGCGCAGGCCGGGG # Right flank : CAATGCCGCCCGGTGCGACGGTGTTGAATCGCGATTTCACGGCTGATGGGCCGAACCAAAAATGGGCTACGGACGTCACCTATCTGCCGACCACGGAGGGGTGGCTCTAACCCGCGACTGCTATGGACTTGTTTTCTCGGAAGATTATCGGCTGGGCGCTGGATGAGCGTCTATATACGCCGCTGGTGAAATGGCTGTAGAGCGCCGTCAGCCTTCAGGAGGGCTCTCGCACCGCTCGGATAGGGGGAGCCAGTACACCAGTGAGGTCTACCGCCAAGCCTTGGAAAGGCTTGAAGCCGTGCAGAGTATGAGCGGCAAGGGGGAATGCTGGGATAACGCTGTTCAGGAAAGCTTTTTTGCAACTCTCAAGACTGAGCTTGCACTGCATGACCCCCAGTGGGGCCGTGCCCAGACGCGGAGCGAGGTTTTTGAGTGGATTGAGGTTTTCTACAACCGTAAGCGCCGCCACTCGGCGCTGGGCTACCTGTCACCGGTGGCCT # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:0, 3:3, 4:0.99, 5:0, 6:0.25, 7:-0.00, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCCGCCCGGCTGTGCGCTGGGCGGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [4,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-14.00,-10.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [21.7-41.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,1.05 Confidence: MEDIUM] # Array family : NA // Array 2 57731-58690 **** Predicted by CRISPRDetect 2.4 *** >NZ_AXLL01000003.1 Deinococcus wulumuqiensis R13 contig3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ==================================== ================== 57731 37 100.0 33 ..................................... AGCCAGGACTACCGCCACACTGCCCGTGCCATC 57801 37 100.0 34 ..................................... GTTTCATGGTCTGGCTCCTACGACGATGAGCGAG 57872 37 100.0 35 ..................................... TTGTTGCGCTCAATCCAGCCATACCCGCAGATGTC 57944 37 100.0 35 ..................................... TCGCGCATCTCGGAGCGCAACCTTGCGCGGGCGTG 58016 37 100.0 34 ..................................... TGGGGTTGCTGGAACTACAGGCACCCTGAACCCG 58087 37 100.0 36 ..................................... ACGTAAAACGTCACGGTGAAACAAGCCCGCCGCTTG 58160 37 100.0 32 ..................................... GATTACCGCCGCACACAAGGTGCCCTGAGCAG 58229 37 100.0 35 ..................................... TTCGGTATCATGAAGCCATGACCGGAGACATCGTG 58301 37 100.0 34 ..................................... CCCGCTCGCAAGGGTGAAGAGCTGGTCTACCGGC 58372 37 100.0 33 ..................................... AACTTTTCCGAACTGGGTCAGGACATACACTCG 58442 37 100.0 32 ..................................... TCGCCCCAGTGGAACGAGCCGCTGGAGACGAC 58511 37 100.0 34 ..................................... ATACCGGGCCACGCTGATAAGCGCGTCGCCCGCG 58582 37 100.0 35 ..................................... ACCTCGCTTCCGGCTACGCCGCCGCGCATTTCACC 58654 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ==================================== ================== 14 37 100.0 34 GTTCCGCCCGGCTGTGCGCTGGGCGGTGGATTGAAAC # Left flank : CAGGGCCCACTATCCGCCGTACCTCCACCGATGATTGACTTACTGGTCTGCTACGACGTGAAAACCGAAACCGAGGCCGGACGCCGCCGCCTGCGCCGGGTCGCCAAAATCTGCGTGGCGCACGGGCAGCGCGTTCAGAACAGCGTCTTCGAGGTCGGCGTCACCGACGTTCAACTGCTCCAGCTGCGCGAGAAGCTACTGAACGCTATGGACGTGACCGAGGACAGCATCCGCATCTACCGCCTGCGTCAGCCCCGCGAAAAATTCGTGGAGGCGCACGGCGTGGATAAGTACATGGATTTCAGCGAACCCCTGATTCTGTAGCGCGAACCTGGTGCGACGGAAAAGACCGGGAGGTTTCGCGCCGCCTAAAAAGTCCGTACAGGACGAGCCGCATGACAAATAGATATTTCCGATACGTCCCCCTTTCTGGACTTCGGCGCAGGGTTCGCGCAAACTGATGTCGGGAAGTCGTCTGGCACGTATTTAGACGATGAACT # Right flank : CCCCCGTCACCCTGCACCTGAGCATCGACGGCGCG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCCGCCCGGCTGTGCGCTGGGCGGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [4,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-14.00,-10.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [46.7-15.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0.37 Confidence: HIGH] # Array family : NA //