Array 1 1621-2319 **** Predicted by CRISPRDetect 2.4 *** >NZ_MUNF01000331.1 Streptomyces murinus strain NRRL B-2286 NRRL_B-2286_contig_331, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 1621 29 100.0 32 ............................. TCTGCGACTGGTGCGTCGGTCGCCGCATGTAT 1682 29 100.0 32 ............................. GCCATCTCGATGGACCACCCGGCCAGCCCGAC 1743 29 100.0 32 ............................. GTCCTCGATTTCCTGATCAAGCTGTGCTCGGC 1804 29 100.0 32 ............................. CGGACGGTGAACGGGACGGAGCCCTCAACGGC 1865 29 100.0 32 ............................. GACCAGGGCGCGGCCGGGCGCATGGCCGCCAT 1926 29 96.6 30 ............................G GGCCTACGCCGCGAACCTCCCGGCCGCCAA 1985 29 100.0 32 ............................. CCAGGTTCTTCACAGCGATCGCCGACGTGACC 2046 29 100.0 32 ............................. GCACTATCGGACAGTCGATACGGTCAGCTCAA 2107 29 96.6 32 .............G............... TCCTCGGCGTCGGCGGCGACTTGGGCAACCTC 2168 29 100.0 32 ............................. TGGACCCAAAGCCCCGTTTCGGGACTCCGAAC 2229 29 100.0 32 ............................. CAGTCGGCCATGACGCCGGCCTCGCCGCCGAG 2290 29 93.1 0 .....T......................G | A [2315] ========== ====== ====== ====== ============================= ================================ ================== 12 29 98.9 32 GTGGTCCCCGCGCATGCGGGGGTGGTCCC # Left flank : GAGTGGCGGAAACAGTGCTCCCTGGGCGGACGCGGGGACCGGAACTTCAGCCTGCAGCTCACGCTGCCCGCTCCAGCCGCATCCCCCCGAAGCGGACTCGCACAGCGGCCTTCCTCTTTGTCGAGACCCTGTCCCGCCGCTGACAATCCGACTGCGCCGGCCGTGCACCAAGGCTGTCCGGCGGGAGCTGGCGCACGACTGAATCCGACTGCGTCAGCACCCGGCATGGCTGTACAGGCGCCCAACGCACTGCTGCTACGACCCACGCGGCAGCCGGGCCAGGAGCTTGGCCACGGAGCACTTACCGATATCTTTCGAGAGACGGGCCCCTCCAACAGGGCCTATCCATAGGACCGTTGGGTACTACCTCTGCCTCCCGCACCAAGCCTGCCCAGCATCTGCGCAGCACCGCACAAACAGCCGGAAGAACCGAAATGTCCCCTTCCCCGGAACTAAGGAGTTCCACCTCCCCACCCCACCAAAACCCCAGCTCACGAACT # Right flank : GGAACACGGGCGTCAGGCGGCGGGCTACTTCGCGGTCCCGTGCCTATCGGGGCGATCCGCCCACCGGCCAGCAACTCGTCTCCGCGTTCCACGAGGTCGTTCCAGATACCGGAGCCTCAGCCTTAGAGCGTTTCCTTCGGATCATCTGATCGTTGGTTGATGTGTGTTGGTGACTGATGCCCAGTGGGCGAGGATCGAGCCGTTGCTGCCGGACCGGACGTGTGATCACCGGCTGGTGATCGACGCGATCGCCTTCAAGTACCGCCCCGGGCAAGCCGTGGACGGACCTGCCCGAGTACTTCGGCTCGCGGAAGTGCGCCCACAACCGGCCGGGGAAGTGGGCCGCCGACAGCACCCGGGAGAAGCTCTTCACCCCCCTGCTCGCCCAAGCCGACACCGAAGGCAACCTCGGCTGGATCGTCGCGGCCGACTCTCCACGATCGCCTGGGCCCATCAGCACGCCGCCGGGGCCCGTCAAAAGGGGCCCCGCCCGACGAGCC # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCATGCGGGGGTGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGCATGCGGGGGTGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [40.0-26.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 4919-5616 **** Predicted by CRISPRDetect 2.4 *** >NZ_MUNF01000343.1 Streptomyces murinus strain NRRL B-2286 NRRL_B-2286_contig_343, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 4919 29 96.6 32 .............G............... GCCCAGGCCGTCAGCGAGGAGACGCGGCTGGA 4980 29 96.6 32 .............G............... TGGTCCCGCTCGGCGCGGAGTCGGTTGCGGTC 5041 29 96.6 32 .............G............... CAGTCGGCCATGACGCCGGCCTCGCCGCCGAG 5102 29 100.0 32 ............................. TCCTCCAGCAGGTCCTCCGGGCCGGCGGACGC 5163 29 100.0 31 ............................. CGGAAGCGCGCCCTTGGCCCCGTCCACCCCG T [5190] 5224 29 100.0 32 ............................. GCAAGCTCACGCCCGCCGAGCACGCCGAGCGG 5285 29 100.0 32 ............................. GACATGGTGCTGGGCACGTCGATGTACAAGTC 5346 29 100.0 32 ............................. TTCCAGCCGCACGCAGGCGGGTGGGACCAGCA 5407 27 89.7 32 A............--.............. TGCGGTAGATCTGTCCGGGTTTGATGCGGTGG 5466 29 96.6 32 .............G............... CGCCGGTCCTCCACGCTGTCGGGGTTGAGGAT 5527 29 89.7 32 ............TG..............T CGGGCGACGCCCGGGGTCTGGCACTCGATCTG 5588 29 75.9 0 .............C.......T.TCCT.A | ========== ====== ====== ====== ============================= ================================ ================== 12 29 95.1 32 GTGGTCCCCGCGCATGCGGGGGTGGTCCC # Left flank : CGACGACGAGCTGCTGGCCGAGACGGAGAACGACGACGAGGAGGGCTTCCGCCGCACCCTGGGCGCCCTCCTCGACGCGGTCCGCCGACTCGGCACCCCCCTCGCGGACGACGAACTGGAACCCTCCGACCTGATCCTCCCGTCCCCGGACGCCTCCCTGGCGGAGGTCCGCCTGATGCTCAACGAGGACGGCCTGATCCCGGACTGAGCGTCCGGGGATCTGGGCTGACTGCGAAGGATCCCCTACCCACCCCGGCGGTGCGGGGGACGTGCGAAAACCGTCATACGTCGTGCCCCGAGCCGACGGATGCTGACGCGAATCCTTGCCAACACCGTCCGTACGGTGATCACAGCCGATAGGGCCATTCAACGTTTCCGGTGCGAACCACGTCTAGCATCTACCCCGCACCGAATGAACAGCAGAAAGACCCGAAATATCCCCTTCCCGAGAAGCAAGGAATTCCGCCTCCCTGCCCCACCAAAACCCCAGCTCGCAAACT # Right flank : AGTGCTGTCGCGGGCGGCCGGGTGGACGGGTGCAAGGTCGGACCTTGGATGCCTAGGCCCGTGCTCGCCCAGAGGCAACGCATGTTGGCGCGAGAGCGGGTGGGAGCCGAGTCGTGCCGTCAGCAGTCAGGCGATGAGGAGATCCGTGTAGTCGACGAACGTGGTGCTGACGTCATCGATGTCCGCCACGAGACGCAGATGCCCACCCAGAGCCGCGATGTAGGCGGCGATGGACTCGACCTGCATCCGGTCGATGTCGCCGTTCTCCATCTGCGAGACCCGGACCTGCGAGACGCCCATCTTGTCGGCCACCTCCGTCTGGGTCAGGCCGCGTCGGCGGCGGAGTTCGGCCAGATGGTGCCCCAACGTTGCCGCCTCGCGGGACGCACGGGCTGCCGCGACGCGTTCGGGCGCGTCGATCCCCGGATCCGCCGACCGCCTGGCGTCGAGCGAGGACTCCCACCGGTAGTGCTTACTCATTCGATCTCCTCGCTCGGGGT # Questionable array : NO Score: 5.70 # Score Detail : 1:0, 2:3, 3:0, 4:0.75, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCATGCGGGGGTGGTCCC # Alternate repeat : GTGGTCCCCGCGCGTGCGGGGGTGGTCCC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGCATGCGGGGGTGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-13] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [40.0-26.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //