Array 1 101142-100198 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_PGPF01000015.1 Escherichia coli strain CRE177 contig000015, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence              	Spacer_Sequence                 	Insertion/Deletion
==========	======	======	======	=============================	================================	==================
    101141	    29	 100.0	    32	.............................	GTGACCATAAGGGCATTTCATACTGCCTTGCT	
    101080	    29	 100.0	    32	.............................	GTGAACGTGACAACGCCCGCGACAGAAACGTC	
    101019	    29	 100.0	    32	.............................	GGAAGAAGCGGTAAAGCGGGTTCCAGTTCAGC	
    100958	    29	 100.0	    32	.............................	AAATTAATTTCGAAACGGGCGTTGATGGTGAA	
    100897	    29	 100.0	    32	.............................	GCTGGCGCACCTTACGCAAAAATAGACGTAAA	
    100836	    29	 100.0	    32	.............................	TTGGTATTAACGGGAATGTAGTCACTCCAGGA	
    100775	    29	 100.0	    32	.............................	GCGATCGTATTTTCCGCTACGTCGCTCAAATG	
    100714	    29	 100.0	    32	.............................	TCGTTGATGGTGTGATGAGTGTACAAAAAAAA	
    100653	    29	 100.0	    32	.............................	ACGACTGAATCCGGCGAGGCTATCAACTGGCC	
    100592	    29	 100.0	    32	.............................	CCGCACACGTCGAGCTGGTGGGGATTAATGCT	
    100531	    29	 100.0	    32	.............................	CAGTAAACGTTCGCGCGTTCTCGCGCTCACGA	
    100470	    29	  96.6	    32	............................C	TCTGTGTATTCGCTACCAGCCAGCACCGGTAC	
    100409	    29	 100.0	    32	.............................	CAGGGTAACTGGCTGCTCCTCAACCATTCCGC	
    100348	    29	  96.6	    32	........C....................	GGGTTTTAGCGACCGGACCAGAGTACGCAACA	
    100287	    29	  96.6	    32	........C....................	GGAGTGATGAATTGGAAGTAACGGATAACCGC	
    100226	    29	 100.0	     0	.............................	|                               	
==========	======	======	======	=============================	================================	==================
        16	    29	  99.4	    32	GTGTTCCCTGCGCCAGCGGGGATAAACCG	                                	       

# Left flank :   GTCCTTGCCGCCGGTGAAATTGAACCACCACAACCTGCGCCGGATATGTTACCACCAGCTATCCCGGAACCTGAATTGCTAGGTGATAGTGGTCACCGGGGGCGCAGCGGATGAGCATGGTCGTGGTTGTTACAGAAAATGTCCCTCCGCGCTTACGTGGACGGCTTGCAATCTGGCTCCTGGAAGTACGTGCCGGTGTTTATGTTGGTGATACATCAAAACGTATTCGGGAGATGATCTGGCAGCAAATCTCCCAACTGGCAGGTTGCGGAAATGTGGTCATGGCCTGGGCGACCAATACCGAGTCGGGTTTTGAATTTCAGACCTGGGGTGAAAACAGACGTATTCCGGTGGATTTGGATGGGTTACGGTTGGTTTCGTTTCTTCCTGTTGAGAATCAATAAGTTACCCGTTCTTTAAAAATAAGGAAAAGTTTGAATTTAGTTGGTAGATTGTTGTTGTGGAATAAAATTGTTTAAAAACAGATACGTATGCTTAGT
# Right flank :  GACGCACTGGATGCGATGATGGATATCACTTAGAGTTCCCCCCGCCCCTGCGGTAGAACTCCCAGCTCCCATTTTCAAACCCATCAAGACGCCTTCGCCAGCTCTTTCACCAGAGGTAGCATTATCCGCATAACGTCACGGCAGCGACGTTCTATTCTTCCAGGAAGTGCCTTATCAATATGTTGTTGATTATCCAGTCTTACGTCATGCCAGCTATTTCCCGCAGGGAATGCAGCTGTTTTTGCGCGTTGCTGATAACCATCCTTATTTCCAAGATTCCAGTTGGTCGCCTCCACCGAAAGTACCGCAATACCGGCTTTGTCGAAAACTTCGGCGTCATTACAACAGCCAGTACCCTTCGGATAATTTTTATTCAAACCCGGATTGGTCGTTGCGGCAATTCCATGACTACGCGCAATTGCCAGCGCCCTGTCGCGCGTTAATTTCCTTACTGCTTCAGGGGTTTTTACACCGCTGTTGAAATACAATTTATCGCCAAC

# Questionable array : NO	 Score: 6.23
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTGTTCCCTGCGCCAGCGGGGATAAACCG
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [5,5] Score: 0.37/0.37
# 	Reference repeat match prediction:         R [matched GTGTTCCCTGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-5.80,-11.30] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [1-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: R [43.3-71.7]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,5.55   Confidence: HIGH] 

# Array family : I-E [Matched known repeat from this family],   
//