Array 1 26401-25828 **** Predicted by CRISPRDetect 2.4 *** >NZ_FRAG01000039.1 Paramaledivibacter caminithermalis DSM 15212, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ========================================= ================== 26400 30 100.0 38 .............................. ATACTAAATGCAAAATTTACAGCTCCTAATGATTTTCC 26332 30 100.0 38 .............................. TATGCTACTGTCATCACATCGGTGTGAAGTATTGCATG 26264 30 100.0 37 .............................. CCGGGTTGCCCTCCTTTTTTACGTTTCTTTTTATTAG 26197 30 100.0 37 .............................. CCTTGATGAACATATTCTCTACCTGGAAAATGAGGAC 26130 30 100.0 38 .............................. CCTTCTACGCTCTGTCTCTTACTTTCTTTCATATTGTG 26062 30 100.0 36 .............................. TGGGTACTCATGTAGTTTTGGCAACCCGCAATTATT 25996 30 100.0 41 .............................. CAGGGAAAAGGTAGACATATTGTTGTAGGTAAAGGTGCAGG 25925 30 100.0 38 .............................. GATATAGTGAACAATGAAAATAATAAACCAGATGTTTA 25857 30 96.7 0 .............................G | ========== ====== ====== ====== ============================== ========================================= ================== 9 30 99.6 38 GTTTATAGATTACCTATGAGGAATTGAAAC # Left flank : TTGTAACATTCAATGTAATGGGTCGAGACTATGAAGCTGCCGTTATGGCATGTGGACACTGTGGATTTGGTATGGGAGCTACACCGAATGCAATGGCTAACATGAATGCTATTTCAGAGAAATTTGGACCTTCACCAAGAGCATTCTTCATACTGCCATTGATAGGAAGTTTGTTTATTGATTTCTTTAATGCAGGAATAATTACTTATTTTATGAATTTATTTGTAAAATAGATAGCTTAGTAAGGAAGATATAAAAAAATTACTTAGTTATAATTATAGTTGGAACTTAATGAATTTATTTGAAATGTCAATAACCAAAATTAACTATATAAAAAGTCGTCGACCTCCAATAATGCAAAAACCTTGGGAGGTCGACGACTTTTTAGTTTTTGAAAATATATAGTAATTTCAATAATTATAAGATTTTATACGAAAAAGAAGGATATTTTTGATTTATGTAGAAAAAATATAAATACAGCATTTTCAATGGATAAATGG # Right flank : TATTTAAAAAAGAAGGATAGCTACTCCTTCTTTTTTTGTTATGGGGATTACCTATGGTAAATGAGAGTATCAATTTAACTTTTCAAATGTGACATCTTCTTCTTTTTGGATATTATAGATAATTAACATCTATTAAACCTTGTTCTAGTCAATTTTTTGTAGATGTGCTATAAATACAACAATTGCAAAAATAATTGAAATTTTCAGAAAATTATATTGACATTTTTCATATTTGGTGGTAAATTTATAGTATAAAAATAGAGTGAGCGCTCGCTCTATTAAATTGTTATAAAACTCGGTAAAAACCTTATTAGACTATTTTCAATATACTGAGTTAGAAGGGGGAGTAAAGTTGAAGGATGCTTTGACAATGTCGAATATCAACCTTTATGCTGTTTTGCGAAATCTTGAGGATTTATGTGCGCTTGATAAGGAAATGGCAGCTTTGATTAAAGGTAAAAGCATTGGATTACAATTTGTTGTAAAAGGGGGACCACGGG # Questionable array : NO Score: 9.24 # Score Detail : 1:0, 2:3, 3:3, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTATAGATTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.30,-1.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-78.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : NA // Array 1 5312-4070 **** Predicted by CRISPRDetect 2.4 *** >NZ_FRAG01000056.1 Paramaledivibacter caminithermalis DSM 15212, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================== ================== 5311 30 100.0 40 .............................. GAACTGTAGTAAACACCATCACAAGCAATCTTCCAGTCGT 5241 30 100.0 36 .............................. GGTTTTAGAAAAGGAGCGTATTAAGGGAGGTGTAAA 5175 30 100.0 37 .............................. CCTTTTACATCTTCAACAGTTGCTTTTTCATCAAGCC 5108 30 100.0 37 .............................. ATTAAAACCGCCTCCCCCCTGTCGCTCTGACGAGCGA 5041 30 100.0 38 .............................. ATTCTTTTGGTATTTCGTCCCCTTCCATTACTGCAACT 4973 30 100.0 35 .............................. CTAACTATGAAAATGCTGTAGTAGAGTTAGAGATA 4908 30 100.0 38 .............................. CAAGCCTTTCTAAGCTTTTTAAGGGATTTCTTCATATA 4840 30 100.0 37 .............................. GTAAATTCCTCATTAGCCTTTGAAATATCGGTTACAT 4773 30 100.0 38 .............................. ACAGTTTTGCTTTTTCTTTTGCTAATCCTGTTGTTGTG 4705 30 100.0 36 .............................. TGAAAAGGTTGCTAATTATGAAGGTCTTGACAAACC 4639 30 100.0 36 .............................. GGGCTTGGAAAAACTAGAAAAGTTACAAAAAAAAAT 4573 30 100.0 37 .............................. CTGCCTTTGATACCTGTATATCATCTATGTAAGCTAT 4506 30 100.0 38 .............................. ATTTCTACTTCTCCTTCCATTCCTTTCATAACTTTCCC 4438 30 100.0 36 .............................. TCCTCTAGCATACTACCACCCCATATTTTTTATATT 4372 30 100.0 37 .............................. AATAATAGAACTTTCAAAATAAAAGAAAACAATCAAA 4305 30 100.0 40 .............................. TATCTTTGTACTCATCAAATGCATATGAACCAATATCTCT 4235 30 100.0 36 .............................. AATATTGTCCAAATTCTATTGGATCAGTAAAATTCT 4169 30 100.0 40 .............................. TATCTTTGTACTCATCAAATGCATATGAACCAATATCTCT 4099 30 96.7 0 .............................G | ========== ====== ====== ====== ============================== ======================================== ================== 19 30 99.8 37 GTTTATAGATTACCTATGAGGAATTGAAAC # Left flank : TTATCATATGAGGAAATTATTTGAAATAGAATTAAAGTTTTTTTAATGTTTTAATAAGATTCTGGTCAAAAAAGTTTTTTTGAGGATTTTTTTTGAAATTCTTTACCTGTATACTTGTAAAAAATCACAATTAAGCATTAAAAATACCTACAATTATGCAAGTTCAAATGATTGCTTTGCATAAAAAAATCAATTTTTGACTTTTTGAACTGGAATCTTTAATAAAAATTACTAAAATAAGGAGGGATTGCAATAATAAAATAGAAATATTCTTAATATTAGCAAAAAATCAAGAGTTTTGCTGAAAATATCAACAATCGAAATTACCTATATAAATGTCGTCGACCGCCAATAGTGCAAAAACCCTAGGAGGTCGACGACATTTTAGTTTTTAAAATTATATAGTAATTTCAATGGTTATAAAATTTTATACAAAAAAAGAAGGATATTTTTAAATAATGTAGAAAAAAATAAATATAGCATTTTCAATGGGAAAATGG # Right flank : AAGTGAAACCAGTAAAAAGATAGAGAATGAGATAACAAAAATGATAAGAAACTGCTTTAAAAGCAGTTTCTTATCGGAATGTGAGTTTAGTATATATAAAATTATATTAAATGAGGGGCTAAGATTAATAATATATTACCATCCAAATTATCTTTGAACCCTACCAGAAGCATCACCCTTTGTCAAGTTTTCAACTTCTTCTATAGAAACTAAATTGAAATCTCCATGAATAGTATGCTTTAAAGCAGATGCTGCAACTGCAAATTCTAAAGCATCTTTAAAATCTTTACCAGATATAAGAGAGTAAATTAATCCTCCAGCGAAGGAATCTCCCCCACCAACTCTATCAACAATTCTTACATTATATTTTCTAGAATGATAAAATTCATTTCCATCATAGATTAAAGCTGACCAACCATTATCAGATGCAGAATAACTTTCCCTTAAGGTTGTTACTACATACTTAAAATCAAAGGCTTCTTTCATTTGTTTAAATATAC # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTATAGATTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.30,-1.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-78.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : NA //