Array 1 197775-197343 **** Predicted by CRISPRDetect 2.4 *** >NZ_NPBC01000008.1 Afifella marina DSM 2698 NODE_8_length_198001_cov_54.3506, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 197774 32 100.0 35 ................................ TTCGGCAAATCCGCTCAGTCGATTGTTGATGGCGC 197707 32 100.0 36 ................................ AGCGCATGCCGGACGAAACACCGGCTCTTATCCCGG 197639 32 96.9 33 .........T...................... ATAGCGCGCCGCGATCGTCTCCGGGCGCGGCTG 197574 32 96.9 35 .........T...................... GCTGGGCTGTGCGCTTTGCCGCGCGCATCGCACGC 197507 32 96.9 35 .........T...................... TGCTCCGATCGTGTGATCCGAGGAGGGGGCGCCGT 197440 32 100.0 34 ................................ TCGGACGAGGCCGGCGCCATGGACTGGTACGGCA 197374 32 96.9 0 ..........G..................... | ========== ====== ====== ====== ================================ ==================================== ================== 7 32 98.2 35 GTCGCCCCTCACGCAGGGGCGTGGATCGAAAC # Left flank : GGCCCGGCGCGCCGGCCCGACGCGCTGGCCCGACGCCCTGGCCCGCACGGCGCGAACCGCAAGCGTGCCGGGTTTCCCCGGGCGGTTCGCGCATATGCCAAGGCGTTGAAAAACAAGCTCTGAGGGGCGGAGGGGCCGCAAATGCCCGCCGTGCCGGAAGCCGGCAGCGCCGTTTCGCGCAGACGGCGCCATTTCTTCTGCCGTTTCGCTGGCTTATCCTGGGGGC # Right flank : CGATCCGGTGAACCCTTCCGCGGAAAAGAAAGGACTATCTCGACATCCTCAAGGCGACGGTGCCTGATCCAGAAGAAGGCGTTGGCGGTTCAGAGCAATCGTCGGCCGAATGAAAAAAGGGCCGCCGACGCGGCCCCTTTCAAAACGCTCGCGCCAGCGGTCAGCCAAACAGCTGGCTGAACCAATTGCGAACCGGTTCAGCAAAGCTCACCGCAGCATCATAGTAGGGCTGGATCGCCGTCCAAGCGAGATAGACGTAATAATCAATCTGCTTGAGAACAGCGAATGCCACAAAAAGTGCCAAGCCCACTCCGGCGAGCGGTCCCATAAACGAAGAATTGTCGCATTGATGCACGATGTAGGTCGGCTGATCGTCGTTCATCCTCATCTCCTACCGCTCGAAGTCGTCTCGATCGCGCTCGTCGTCTCTGCGTTCCATTTCATTCATCCGCGGAACCTGCTGACGAGCTGGGTCGGTTTGCTGGTCGCTTGAGCGCGAA # Questionable array : NO Score: 6.02 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.85, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCCCCTCACGCAGGGGCGTGGATCGAAAC # Alternate repeat : GTCGCCCCTTACGCAGGGGCGTGGATCGAAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCCCCTCGCGCAGGGGCGTGGATCGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-6.80,-7.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [43.3-35.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //