Array 1 1129259-1129026 **** Predicted by CRISPRDetect 2.4 *** >NC_021169.1 Archaeoglobus sulfaticallidus PM70-1, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 1129258 30 96.7 38 ..................T........... AAAGCGACATTTAAGGTCGAGTCGATAGAACCACAAGA 1129190 30 100.0 37 .............................. CGTTTACTGCTTTGATTTTTAGAGTAGTTCGCTCTTC 1129123 30 100.0 38 .............................. CAGATGTCATCAGATTTGCTGTTAGGGATGTTTACAAC 1129055 30 96.7 0 ..................T........... | ========== ====== ====== ====== ============================== ====================================== ================== 4 30 98.3 38 GTTAAAATCAGACTATTGCAGGATTGAAAG # Left flank : TAGAATTGATAAAACGAAGTTTATGAATTGCTCTGCTTTGAATTTTGACATGAAATTGTAGACAGATTTTAATCTGATTCTCTATCCTTAAAAATTTTCTGAATTCGTAACGCTTATTTACCTCGCTAACAGCGTAAGATATTCCACCAAAAAACATTGCCAGAATGATGATCCTAAGGAACTCTATCGCCTTATTTACCGGAGTTATTCCATTTCTTGCCAAAGCTTTCTTCGTTTCCTCGTTTCAAGCTTATGATTTTTCTTAAAAGCTCCCATTTCTCGTCTCCTTCTACTGGAATTGGTAATTTCACCCAATTACCGGGAAAAGTAAGAATCTATGAGATTTATTAATTTTACTGTTTATTGTTGCTTTATTTTTGATTTTGGGTAATCAGGTTATGTCTCGATACAAGAAAAAGTGGAAAAGTTCTTTGTTTCTGGTATAGAGGTGTATGGATGGAGATCGGGTTGCGAGTTGATGGAACACCATAAACAGTTTA # Right flank : TTTTTGCACAAGGAGGTGGTCTCGTGCCAGTAGGAGATTGGAAATTTAATTGGGATTCAGAAGAGTCCGCCATTAGTAAAGGAGGTGGTAAATTGAAGGCAGGTTTGGGTATATTGGTTCTTTTGTTGTTTATAGGGGCAGCTGTGGCTCTTAGTTCAGTAGTCGTCATAGACAGCACAGAAGTCGGTGTGGTTAAAGAACTTGGAGTTGTAAAGGACGAAGAGCTCACCGAAGGACTTCACATCGTCAAACCTTTCATCACCGAGGTCATCAGAATGCCCATCTATGAGAAAACACTTGAGATGGTCGGTGAGAGACACATCAAGGCCTTAACCTCTGAGGGTCTTCCAGTCTACTTCGATATGGCTGTACAGTACAAGATAAACCCCACTAAAGCATCCGACGTATATAAGTCCCTCAAGAACTACGAGGTTTGGATGGAAAGCAGGATTAGAGCACACGCAAGAGATATGGTGGCTCAGTACAAAGCCGAAGACCTG # Questionable array : NO Score: 8.77 # Score Detail : 1:0, 2:3, 3:3, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTAAAATCAGACTATTGCAGGATTGAAAG # Alternate repeat : GTTAAAATCAGACTATTGTAGGATTGAAAG # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.70,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [1-1] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [56.7-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.5 Confidence: HIGH] # Array family : NA // Array 2 1142192-1137911 **** Predicted by CRISPRDetect 2.4 *** >NC_021169.1 Archaeoglobus sulfaticallidus PM70-1, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ============================================== ================== 1142191 30 100.0 38 .............................. CAGGAGTGGCGACGGGAGTAAAACAATTCCTGGATATA 1142123 30 100.0 38 .............................. GTGCTTAGGACAAAGTATGGATACAACTTTATCTTTTT 1142055 30 100.0 38 .............................. CTCCGTAAACTGATAGTTGAACATAGACACTGGGATTT 1141987 30 100.0 36 .............................. TCTGGTATGGTTTCAGTATATGTGATTTCTGTCCAG 1141921 30 100.0 37 .............................. TTGCTTAACTTCTTGGCATACTCTGGATCAACATGCA 1141854 30 100.0 39 .............................. AGCAGCATCATGAACGGGAACAGGTCAATGAGCATCAGC 1141785 30 100.0 38 .............................. GTAGTGTACCCCATGCTTCCTCATCTCCTCAAAGCTCA 1141717 30 100.0 38 .............................. TTTCTTTGTTCTTTCGTAATAATCTTCTGGAACATCGA 1141649 30 100.0 38 .............................. CAGGAGTGGCGACGGGAGTAAAACAATTCCTGGATATA 1141581 30 100.0 38 .............................. CTAAGTATATCTGAAACATCGATCTGCAACTTTTCAGG 1141513 30 100.0 37 .............................. ATTAGGTATGCTTTTACTTCACCAATCCACTCCCCTA 1141446 30 100.0 38 .............................. AAATCTGTCACCTTAGCCGCTGTTGCCCGTGACCACTT 1141378 30 100.0 37 .............................. TTAACCTCACTCCACAACCACTCGATCCCCGTCAAAG 1141311 30 100.0 36 .............................. GTAGATGTTGAGTTGTTTTTTAATACCACTGGGACA 1141245 30 100.0 46 .............................. CACCAATCGCAGATGCGGGCGTATCTACGGTTTAGTTTCTTTTTCA 1141169 30 100.0 38 .............................. CTGTGTGAAGTGTGGAAACTTATTGGACAGTGACGATT 1141101 30 100.0 38 .............................. GAATCCATAGATATCTTAACTGCTTCCACTAGTTTTTC 1141033 30 100.0 37 .............................. CAGAAGGGATTGCAAACTCAATAGAATCCGCAGTAGA 1140966 30 100.0 38 .............................. CTATTTTGTCTATTAGCTCGACGACGACATTGAACAGA 1140898 30 100.0 39 .............................. CTGGAAGAGGGATAACCGCCGGAAAGCCAATCCCGAAAT 1140829 30 100.0 38 .............................. GTGAGCTACGAGATCGAGATCAACAAGCTTGAGTACTA 1140761 30 100.0 38 .............................. CTTTCCTTCAGGCGGATGAAATTCTTGTGGAAGATCTT 1140693 30 100.0 37 .............................. AGATTATTGGTCAGGAGTTTAACCTTAATCTGGTACT 1140626 30 100.0 36 .............................. CGTCTGGAATCCTCTTATCAATCACCTTCATCTTGC 1140560 30 100.0 39 .............................. CATTCGTAGCAACGAGGGGTTTCATCAATCTCGTCGATG 1140491 30 100.0 43 .............................. GTAAACAGCGAGCTTGTTCAGTCCCGTGAGCGTGAACTCAACG 1140418 30 100.0 37 .............................. CAGAAGGTTGTTGTGGATATGTCGGGAATGGGAGCAG 1140351 30 100.0 40 .............................. GTTGAGTATTTCGAGACCAGAGACTTTCTGTTGCTGAACA 1140281 30 100.0 38 .............................. AAAAATGCTTTAACACTATCAGCAGCACCAAGAACTGA 1140213 30 100.0 42 .............................. GCACATTTTGACAACTCTTTTCTTATCGAGGTTCTGAGCGAA 1140141 30 100.0 38 .............................. AAGTACAACGCCCACCCCTTGTTTGTATTCACAAGCGT 1140073 30 100.0 38 .............................. ACTGCTATCAGATGTTGCCGCTCCGCCTACGCTGGCTG 1140005 30 100.0 39 .............................. CCCCACTTTCTCTTTACTATATCTTTCAGCATACCTCTT 1139936 30 100.0 37 .............................. CGTTTACTGCTTTGATTTTTAGAGTAGTTCGCTCTTC 1139869 30 100.0 38 .............................. TCACCCAATACTATCTTTGTCACTCCGTATATAAAAAT 1139801 30 100.0 36 .............................. AAACCATATTGCGACGGGTGCACATTTGTTAAACTT 1139735 30 100.0 38 .............................. GAACTGTTTTGTTCAAATAACCTTGTCTGTAAAGCTCA 1139667 30 100.0 37 .............................. TTTTTCCTCAAAGGTGTAAAAGCTCCTAACAAAAACC 1139600 30 100.0 36 .............................. TATAACTCTAAGGTTATTACATGCAGATGTATTGAT 1139534 30 100.0 39 .............................. GGGATTCGTGGTATTTCATTACACGGCTCTGATATTTCA 1139465 30 100.0 41 .............................. ATATAAGAGAGGTGAGCAGTCCATGAACTTCAGCAATACAG 1139394 30 100.0 37 .............................. TGCGATATAGTTACAAACACACAGGATACTGCTTTAT 1139327 30 100.0 38 .............................. GCGATATCTACGATAACAACATCAGTCTTTCTAAACAA 1139259 30 100.0 41 .............................. ATAGTTTTCGACATAGAAACCACTGGACTAAATCCATTCAC 1139188 30 100.0 38 .............................. GTTTTGGTTTGTGGCGACGGTTCTCTGAGAGACTACCT 1139120 30 100.0 38 .............................. TTATATCATAATCCTTGGGCGTCTGTCCTTTGTAATAC 1139052 30 100.0 38 .............................. ACAATGTCATAGTTAGTGCCATCTGAAGCATATCCCTT 1138984 30 100.0 43 .............................. ACAATATTGTTCGGATTTCAGGATTGGTCAAACTTTTATTTAG 1138911 30 100.0 44 .............................. TATTTGCAATAATCAATATATACTATGTTAAACAAGTGTTGAAT 1138837 30 100.0 38 .............................. GCTTTCAATCCAAAAGTAAAGCTGTCCTGAGTTGTTAA 1138769 30 100.0 38 .............................. CAGTACTCCACATAAGGAGGTATTGCATGCGAAAACTT 1138701 30 100.0 42 .............................. AGGATGCAGATTCATAAACCCTCCCATCTTGAAGTCGCCAAC 1138629 30 100.0 38 .............................. TGTTCATGTCTGCTTGTGGAATTTTGTTGTTGATGGTG 1138561 30 100.0 44 .............................. TGCGGTGGAAGGCTCGAGGCAACAGATGTGGGCTGGAGATGCAG 1138487 30 100.0 39 .............................. TCCGAAATATTCACACATAACAGCCTCAGGAACATGTTT 1138418 30 100.0 37 .............................. ACAAAATGGGCGAATGCACATACATGTAGTTATTTTT 1138351 30 100.0 41 .............................. CGTCAATTTCTCTAATAAACCTCTCCGCTTCATCAAACTCC 1138280 30 100.0 38 .............................. ATCCTTCTTAATTGGATCCCAACTACCAAGAGTGAGCC 1138212 30 100.0 37 .............................. TCTCATTGTAAAAGAGTCTCGTCATGAATCCAACATT 1138145 30 100.0 38 .............................. GATCTGAACCTCGACTTCGATGTTTGATGGATCTTTCT 1138077 30 100.0 37 .............................. GCTTGTTTATTGATGCGATAAAATACAAACTTTGAAT 1138010 30 100.0 39 .............................. AACAGCAGAACAAGACGCATGCTCGGAAAAGTTAGAAAA 1137941 30 86.7 0 .....................A..G.C..T | G [1137913] ========== ====== ====== ====== ============================== ============================================== ================== 63 30 99.8 39 GTTAAAATCAGACTATTGTAGGATTGAAAG # Left flank : ACAATTTCGTTTTGCAGATGAAATAATAGTTGACCTGAGTTCCCTTGATGTACATCTCAGATATCATTTACATATTTTTGAATCTAACCAAATATAAATCTTTGTAAAGATCTTTCAAAACTTTAATTCGTCTATGTTTATTCTATCTCTTTTTTCTCCAATTTGTAAATTGAGAATTCCTCGTGACTTTCATTCGATTTAACGGTTTGAGACCAATTCGTCCATCTTTTTATTTGGTAATTTTATTGGTTAAATTTGTTATTTTTATTTTCTTCTTTTACTGAATGGCAGGTTTATGAGAAGCTATCTAAGACATACCCTGCCAGATTTTATTTAAATTGAAATAAGCCTGGTTAGAGAAAGTTAAATTGGAAACAGGATCAATTGAGAAAGTCGTCCATCCTTATAAATGAGTTGCATTACTGGAGATCGACGACAGAGGGTCGCTATAGCACCCAGTAGAAAACTATAAATTGGAAAAAGAAGGAAAATTACCGAGG # Right flank : TCATTCCTGCAAAGATACCATTTCCAATTGATTCCTCAGAGACCAGCCATTGTGAAAAAATTTTACGCATCTATTTAATATCTACCAAAAATTTTTTATAAGCCGTTTCAACAATGCACAAAAAACAAATAGAGGTGCCAGACATGAGAAAACTGCTGAGTGTCGGTTTTGTAATTGCACTGATTCTGGCAATAGCAATTAGTGGGTGTGCTGGAACAAACAAAACTACAGAACCGTCCACTCCACCTTCAGAAGGTGCAAAGGAAGAAACCAAGAAGGTGGAGAGCAAGCCAAATGTGGTTATTTACGGATACGTAAGCGAAATGACCACATTGGATCCGAGCACAGAGTTCTCTAACTCAATCATTATTCTGCCAAACGTTTACGAATGTCTTGTTAAGTACACTCCAGAAGGTTTGAAGCCGTGGCTCGCAACCTCCTGGGAGAGCAACGAAGATGGAACTGAATGGATATTCCACCTGAGAAAGGGTGTAAAGTTC # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTAAAATCAGACTATTGTAGGATTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.70,-3.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : NA //