Array 1 39786-39979 **** Predicted by CRISPRDetect 2.4 *** >NZ_BBLD01000063.1 Vibrio hyugaensis strain 090810a, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 39786 28 96.4 32 ..C......................... TCGTCGTCAAAGAGTTCAATGAAATCGTTTTT 39846 28 100.0 32 ............................ TAATTTGCCGACACTGAGCACTAATGAAGCAG 39906 28 100.0 18 ............................ AGGTCAGGAAGAAAGCAA Deletion [39952] 39952 28 67.9 0 CC.A.....T.A...A....T...T..A | ========== ====== ====== ====== ============================ ================================ ================== 4 28 91.1 28 GTGTCCTGCCGCATAGGCAGCTAAGAAT # Left flank : TCTTTGATGGTAAATGAAGGTTTATTTGAGATCTCCAGTGTATTTGAGGTGCCAGATAATGCGATAGAGGTGAGGTTTACCCGCAATCAAACGATTGGGAAAAGTTTTCTGGGTTCCAAGAAACGAAGAATCAAACGTAGCATGGCGAGAGCCGAACTATCTGGTGTTGAACCATCGTTACCAGCCACTAATGAAGAGCGTGTCGTCGATAGCTTCCATCGAATACCAATCTCCAGCGCTTCATCTGGGGAAGATTATATTTTGTTTGTACAAAAAGAGCTTGTGAGTGAGCGCGGTGCAGCAAACTTTAATAGCTACGGTTTAGCCACCAATCAAGAAAGAAAAGGCACGGTACCAGAGTTACGTGTTTGACCCTTTTTCTAAAGCTCTTTTTTAGAGATTCAAAAACAATGAGTTACAGATGCAAGAAGAAAAAGGGTATTTTGGTGAATTGTGACGTTAAGCATGCAGAATCAGATGGTTATAGACTATACTCTACA # Right flank : AAACCATCGAGTTTAGGCTTGGTGGTTTTTTTGTTTGTTTATAATCGGCTTTATTCATTTAATTTTGTGCTAGAAAAATTACAGCTAGCACGTTTCTGCCCCATTATGAGTTGCAATTGCATAAGAGCACACTTGGTCCGACTTTCTTGTGAAAGGGGGGAGCTATACTTCTTTATAAGTAATTAAATCTAGACCTTGTGTTATGACCTCAATGCCCTAATCTAATAGGAAGTAACTTCGTAAGTGCGAAACCAAAAAACGAATAAAGGCTATAAAAACAAATGGTTATGATTATTTTTGGGTTTGCTATCTACTTTTTTACTAAATTCAGGTAACATTGAAGTATCTAAGGGGGAGTATATAGGATGAACATAGCTGATAGAGTACGTAGAAACATTAAAAAGCTTGAAGAAGGTCGAGTGTTTCTAGCTGGTGACTTGCCTACATATAAGGAGGATAAGTCAGCGACAAATAAGGCTCTGAATTATTACATCCATAGC # Questionable array : NO Score: 4.91 # Score Detail : 1:0, 2:3, 3:0, 4:0.55, 5:0, 6:0.25, 7:-0.49, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTCCTGCCGCATAGGCAGCTAAGAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTACTGCCGCATAGGCAGCTTAGAAA with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //