Array 1 95516-94284 **** Predicted by CRISPRDetect 2.4 *** >NZ_KV787894.1 Enterobacter sp. HMSC16D10 Scaffold539, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 95515 28 96.4 33 ..T......................... CGGTTGGTCCTGTCCGTTTTGAGTAATGATGTT 95454 28 96.4 32 ..T......................... TCGGAAGTTGCACCGATGCCCTGCGAACCTGG 95394 28 92.9 32 ..T.......C................. ATTCCTCGTATGTTGCTTCGAGAAACCAAAGA 95334 28 96.4 32 ..T......................... TGCTTAATAGGGCGCACAACATCGTCGTCACC 95274 28 96.4 33 ..T......................... GCAGGGCGTAACCATCACGATCACTGCAATGAC 95213 28 96.4 32 ..T......................... GGCAGGAACGGAACTACAGCGCGACGATCAGG 95153 28 96.4 32 ..T......................... TTGTTCAGAGTCGGAAGCTTGTCAAACTTCTG 95093 28 100.0 32 ............................ TGGATATATTGACCACTTCTGATTATTCTTTA 95033 28 100.0 32 ............................ GTCGTGGTAAACGCCATGACTATTTCACATCG 94973 28 96.4 32 .............A.............. AACGGGAGTAGACCGTATTTCTGTTTCCGCGC 94913 28 100.0 32 ............................ TTCGAGGGTTATCAGGAGGCTCTCAACCGCAT 94853 28 100.0 33 ............................ AGAATTTAGTCCCATATTCGCCACAACCGAAAT 94792 28 100.0 33 ............................ AAACCGTTTAATCTGGGATAACTGGCAGAAATT 94731 28 100.0 32 ............................ TATTGGCCGTTAATCGCCTCATTACGCAAAGC 94671 28 100.0 32 ............................ GTGTCGAAGCGCTGATCTGTCAGGTCAAGCCA 94611 28 100.0 32 ............................ GTCCACGCAGGCCGCAAGACCTGGGAACAGAA 94551 28 100.0 32 ............................ ACCAGCCGCGCTTCACCAGCATCGGCTCCAGC 94491 28 100.0 32 ............................ GTACTCGATACCCTCAAAACCGAATTTAAGCT 94431 28 92.9 32 ..T.T....................... GCTGGAATCAAAGTGATGGAGTGAGTATAAGG 94371 28 85.7 31 A..........C...C......C..... ATAGAAAATAAGGCCTAACAGTCCTCGGACC C [94346] 94311 28 75.0 0 ........T..A....A....CCT...G | ========== ====== ====== ====== ============================ ================================= ================== 21 28 96.3 32 GTGCACTGCCGTACAGGCAGCTTAGAAA # Left flank : TCCCACAAACGCAGCCCGTATGTCGTTGCCTTGGGGCTTATCTGGAAGAGGTAAAATCCGGCCTCACAGAATCCATGCGTGATTTTCAAGTGGTGGAATTTGAGGACGAAGCGGAAAAACCGCGACAAAAAGAGTGGTTGCTGGAAGATACAGAAACGAAATGCGACTACTGCCGGGCGTTAAACCATGTGCTGCTGGTGTCGCATTTTGACTGCGATATGTTGCCGCACCTGACGGGGTTGCTGCATGACATTACGCATTCAATGGCCGCGGATGTCGTTGCACCTCAAAGTGCAGAAACGGTAATTCATATTATTTCCTGAGTGCTATCTGAGGCGTCGGGGGTGTTCCTCTGACGCCATTGGTTTAAACCCTTTTTTCTGATGCTTACGTAACCTTTTGATTTATATAATGCGAATTTACGAACCAGAAAAAAGGGTTTTATGCGGGAAAGTTGATTATTTTCTTTTTTAACAATAAGATGGCGCAGTTTCCTTTCA # Right flank : CTGGAACGAACGGCTAAATAATTGTTCAAATAATCGACTGCGACACACAAAAATAAGGCCGGGAATATCCCGGCCTTATTTAATATTCATCTGCCATTACAGGCGAAAACAATTAGCGACTACGGAAGACAATGCGGCCTTTGCTCAGGTCGTACGGGGTCAGTTCAACAGTCACTTTGTCGCCCGTCAAAATGCGGATGTAGTTTTTGCGCATTTTACCGGAGATGTGCGCAGTTACCACGTGACCGTTTTCCAGCTCTACGCGAAACATGGTATTAGGTAACGTATCAAGTACGGTACCCTGCATTTCAATATTGTCTTCTTTGGCCATCTAATCCTCTGGGGTATCACTACCAAGTTTTGAACCGGCAAGATAATGCCGAAATTCATCAATTAAGTAAAGAATTGCGCGTTTGAAACGCAGCAAAACAGTTTCGGCGCATTGCCCAAGCGTCACGGTACAACCGAACGGAAAGCGCATTCGTAAAGGGGATACAACA # Questionable array : NO Score: 5.81 # Score Detail : 1:0, 2:3, 3:0, 4:0.81, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.74, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [14-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 111112-110422 **** Predicted by CRISPRDetect 2.4 *** >NZ_KV787894.1 Enterobacter sp. HMSC16D10 Scaffold539, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 111111 28 100.0 32 ............................ CATCTTCACGAAGCCCGCCATTGAGCGGGTTT 111051 28 100.0 33 ............................ AAAGACTTTCCGACCGACAAAGTCACCACGGCT 110990 28 100.0 32 ............................ CGACCTCGGTCGTGAAGCAGTCCAGATAAGAA 110930 28 100.0 32 ............................ TGGATACGCCCTCATAAGGAGCGTGTAATATA 110870 28 100.0 32 ............................ TCATCCCGGTAACGAGATGGATAAAGGCGCGG 110810 28 100.0 32 ............................ CTAAACCAGTTAAAGCGGCGCTTTCAGTGGTT 110750 28 100.0 32 ............................ TCAGACGATGGATCGATCCACGCCCACCGGCG 110690 28 100.0 33 ............................ CGTATGCGTTTACTGAACGAACCCAATAATAAT 110629 28 100.0 33 ............................ TCAAGGCTAAAGTTTTGCTGCTGCAGGTATGGG 110568 28 100.0 32 ............................ TGATGGCTGTAGCTTAGAATCAACCATCTTTT 110508 28 100.0 32 ............................ GTGTTCACGCGCGTAGACATCCACCAGCAGGG 110448 27 96.4 0 ..............-............. | ========== ====== ====== ====== ============================ ================================= ================== 12 28 99.7 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : ACGGTTTGCATAAGCTGTTTGGCGGGGTGGGCTTTATCAGCGGCATGCTGGTGGAGAAAGGGCTGCCGGGGTTTATTGCCTACGGCGTGTTGATTGGCGAAGTGGTGGCGCCGATCCTGATTATTGTCGGGCTCTTTACGCGCCCGGCCGCGCTGGTGCTGGCGTTTACGATGATCGTGGCGTGGCTGATGGTGGGATTGGATGAGACATTCGCGCTCGACAAGGTCGGCGCATGGGCGATTGAAAGCCTGGTGTACTTCTTTATCGGCTCGCTGGCAGTGGCGTTTTTAGGGGCAGGGCGGTTTGCGCTGGGGAAAGCACCTGCGTGGCGGTAGGGGTTGGAATCTGTTCCGAGGGAAGGGGTCTACGGACCCTTTTTTATTGGTGAGTTTTAAGTTGTTGATTTCACAACGGTGAATTGTTGGTGGGGAAAAAAGGGTTTACGGAGAATTTTAGGGGGATTTCTTTATATCACAAGAAGATAGGTGTAGATTGTTCCA # Right flank : GCACTTCAGCCGGGTAAGCGTCGGTGGTTAGGGTCCAATGCCGAACAGGCAGTAGGCACAACGTAGGCCGGGTAAACGCAGTGCCACCCGGCAAAAAAGCCCGGTGGCGCTGACGCTTACCGGGCCTACGAACGAACGTTTATTGTTTATGCGAGGACCAGATCGCCCTGCGGATGGCACGAGCACGCCAGCACGTAACCCTCGGCAATTTCCGCGTCGGACAGCGTCATGGTGCTGGTGACGGTGTACTCCCCGGAAACCACCTTTGTTTTACAGCAGCCGCACACCCCGGCACGGCAGGCCGCCGCCACCGGCACGTTGTTGCTTTCCAGCGCCTCCAGCAGCGTCGTGCCCACGCGGCCAAAGAAGGTCTGCGCAGGCTGCAGTTTGGTGAACTGAATCCCGCTGGTTGCCGCTTCCGCCACCGGCGTGAAGAACTGCTCTTTGAAGAAACGGGTCACGCCGAGCGCTTTCACTTCTTCTTCCACGATAGCCATGTA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [40.0-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //