Array 1 17261-20349 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACNFB010000024.1 Vibrio fluvialis strain GCCln43 NODE_24_length_28081_cov_31.419582, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 17261 28 100.0 32 ............................ GAAAAGCTTCGCGAAGAAATCAACCGCAAATC 17321 28 100.0 32 ............................ GAACCAGCGACCGGGGTTGTCTCGCAACAGTG 17381 28 100.0 32 ............................ AAACGTGCAAGCTCGACAGCTTCGGCTTGACA 17441 28 100.0 32 ............................ TGCAATAGCAAGAATTGCAAAAGTAACATCAC 17501 28 96.4 32 A........................... GATAACGTCACTTACTGTGTTACCGGACTGGC 17561 28 100.0 32 ............................ ACACTATCGGGTCATCGACGCGTAAAGAGCTT 17621 28 100.0 32 ............................ AGGAAACTTAACGGCGTACTCGGGTTGCAATA 17681 28 100.0 32 ............................ TTTTCTCTAGCGCAAGCAGGGGATATTGTTTA 17741 28 100.0 32 ............................ TGTTCAGGTTACCGAGCAAGCACTCGCTGCAG 17801 28 100.0 32 ............................ CTTACTAGCTACGCTTTTGAATCAATGTTCAA 17861 28 100.0 32 ............................ TGAGATACGGCAAGCCACAGGTTCAGTGTTGC 17921 28 100.0 32 ............................ ACCAAAAACCGAGAGGGGAAAAGCGCCGATCA 17981 28 100.0 33 ............................ TGAGACCGCGCCGCGCGAGCCAATCGGTTACAT 18042 28 100.0 32 ............................ ACCAAAAACCGAGAGGGGAAAAGCGCCGATCA 18102 28 100.0 32 ............................ TCATTTCTTCACCTATGCACCATCATTTATCT 18162 28 100.0 32 ............................ GCACCCTGGCGATGGAGGGGCTGGGCGAGATC 18222 28 100.0 32 ............................ TCTCTTTGGAGTTTCATCTTTCTCTGCTCATT 18282 28 100.0 32 ............................ TGCTAAACTCAGTAGTAATATTGACATTGAAG 18342 28 100.0 32 ............................ TTATAAGAAACGGCACCTGATTTAATGGAATC 18402 28 100.0 32 ............................ AGAATGGACAGATAACCGACTGTCGGCCTATT 18462 28 100.0 32 ............................ AACCTGCAGCGAGTAGCTGGTCGCGGGTGTAG 18522 28 100.0 32 ............................ AACAATCTTCACTGCAACCATACGCACCTCAT 18582 28 100.0 32 ............................ TACATCGGTAACGGTGTAATCCGCATCAAATC 18642 28 100.0 32 ............................ ATTCCTGTATTTACCGGTATCGAGGTGAAAGA 18702 28 100.0 32 ............................ GATCGTACCTTTGCCGCTACGACGCAGGCCGA 18762 28 100.0 32 ............................ CTAACGCTATCGTATCAAGCCTGTACAGTGCG 18822 28 100.0 32 ............................ AGTCAGAAACAGGCTCACAAAGCCCTGGAAGA 18882 28 100.0 32 ............................ GTGAATTCCGTTGTTCGGTGTTTGCGATACTC 18942 28 100.0 32 ............................ ATCATTTTGTGGAAACTATAATCGCGGACGAG 19002 28 100.0 32 ............................ TGTAATGGATGACGTGGTAAATGCCATTCCGG 19062 28 100.0 32 ............................ GAATGGGTGAAATCTGGCGAAGTTCCTGCCGG 19122 28 100.0 32 ............................ TCACTCTGTGCAGCAGTCGCTTCACTATTAGC 19182 28 100.0 32 ............................ GACGAGCAGTTCCATAACGCGACCGATCGTAC 19242 28 100.0 32 ............................ GGTAACGATATGATTAACTTCGGCCGTAAATA 19302 28 100.0 32 ............................ ATCTGTGCAGGCTGCTGTACGGAACCTCTAAA 19362 28 100.0 32 ............................ ATAAAGCGTACGTCGCATTCCGCACCGGACAG 19422 28 100.0 32 ............................ ATTTTCGAGAGTACCGTCGCGGCGGATCACAT 19482 28 100.0 32 ............................ ATCTATTAATGTACCAGCGACGAAACACTCAT 19542 28 100.0 32 ............................ GGACTGTCTCGAAGCCGTGTGTGTCGACCAAG 19602 28 100.0 32 ............................ AGCAAGCGCGCTTCCATTATCTATAGGTTGCG 19662 28 100.0 32 ............................ AACAATCGCATATATCATGAGCCTAATCTCGT 19722 28 100.0 32 ............................ TAGGTATGCCTTATTGCTAGAGCCATTCTAAT 19782 28 100.0 32 ............................ ACTTCACGCGACTGGCGCAAACGCTGGCCCAT 19842 28 100.0 32 ............................ GCTCATTCCACAAGTGGCAATTGAAACCACTC 19902 28 100.0 32 ............................ ATGCAAGTCACTAATATCAAATTCCACAACGT 19962 28 100.0 32 ............................ GCTAAGCGACAGAGGTAACGACCAATGAACAC 20022 28 100.0 32 ............................ GCTAAGCGACAGAGGTAACGACCAATGAACAC 20082 28 100.0 32 ............................ CAACCGCGCCAGTAATCGCGGAAAGGCTCGAT 20142 28 100.0 32 ............................ TTTCGGGCGCTATGCGTCTATGTGACATCATC 20202 28 100.0 32 ............................ AAGGTGCTGGCCACGGCACTCAGTTGCGTCAC 20262 28 100.0 32 ............................ TCGACGAAGTACTTTACCCCAACTGCCCGCTA 20322 28 71.4 0 .C.......TAC.......AGG.....T | ========== ====== ====== ====== ============================ ================================= ================== 52 28 99.4 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : GATGTCACTTACGTCAGCTTTGTACGCAAGCAGGTGAAATCACCCGAACGAATAGAGCGGGATATGCAGCAAAAAGCCGCACTATGGGCAGCAAAATCCGGTAAACCGCTGGTGGAATGTTTAGCGGATTTGCAACAAAGCAAGCCGACAGCATTGTGCTCTTTGCCGTTTATTTACTTGCATAGCCAGCAAACCAAGCAACGCTCACCAGAAAAAAACAGCAAGTTTCCGCTGTTTATTCAGATGCAGCAGCAAAGCACATCACAAGATGGGGGCTTCGATTGCTATGGCTTGAGTAGCAAAGCGAATGGACAATCATCATTGGCTACCGTACCGCACTTTTAAATTGAACGAAAAAGGGTAGTTTTTACCCTTTATTTTTGCTATTTAAAAATATGTTTTAAATACAAATGGTTGCAAATGGTAGTTTTTAAAAGGGCAAAAATGCATTTTTCATCCTAACTACTTGTTGCAGCATTCTTTTATAGATTTATTTTATT # Right flank : TTAAAACGGGATTCATGGCAAACGGTCGTGGAAGTTGTATCTTACATAAAAACCTAACAACGTCGATATCAATAGGTTTTTTGTGTACTTATTGGTATGTGTAGTGTGTTATTCTGAATTGGTTGCAAGAGACCAACATTAAATTTTTCATAATTGTTTATTGATTTAGTTAAATCATACGTTATTTTCGATAACAACAATGACATTTTAGGTTCGCAAGTATCCAATGATGTTTGATTTCCAGCATTACTATTTCTTACATTGCCACAAAGCATCCTTGTTCATATTACCCAACTAGTGACAGTGTCTCCGTCATTACTTGATACCCAATCTTCTCGCTAGGCGGTGTAGGTTTCCACTATCCAGTTCCAATTGTCGAGCCGTCGCTGCCCAGTTGCCTAGGTTATGATTGAGCGTTTGAACAATGATTTTTTTTTGATACCTATCCGTTGCTTCTTTAAGCCCCATACCTGATTCACTAATCGGCGAAATGTTGGTTG # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //