Array 1 360499-357757 **** Predicted by CRISPRDetect 2.4 *** >NZ_BPLA01000004.1 Leuconostoc rapi strain DSM 27776 contig4, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 360498 36 100.0 30 .................................... AAACTCTGAACATCTCCATGACGAACTCAA 360432 36 100.0 30 .................................... TAGGTCGTCTGTATCATCAACAATGTTTTG 360366 36 100.0 30 .................................... ATCTACACGCACACTGATAAGGCTCATCTC 360300 36 100.0 30 .................................... TATCAACTTTTGAAATCTGCCACCAGAAAC 360234 36 100.0 30 .................................... CACAACAATGACTTTGCCCGCATTAAAGCA 360168 36 100.0 30 .................................... ATAGACTAGCGGATAAAACACTTTTGCGCA 360102 36 100.0 30 .................................... TTTTAAAACGGATATTGAAGCCTATATCAA 360036 36 100.0 30 .................................... TATTTTTTGTAATAACTTTAATATAGTTGG 359970 36 100.0 30 .................................... GATTCGGTTTGTTAAGGAATTGGACAAGTT 359904 36 100.0 30 .................................... GCTTGCATTATTCGGAGATGGTACAGTTGG 359838 36 100.0 30 .................................... GGATTAACTAAATTAAGCACGTTGGATCCA 359772 36 100.0 30 .................................... ACTGGTGTTCAGATTGGTATTACTAATGGT 359706 36 100.0 30 .................................... AACATATCGAGCGTTGACACCTTTGTTAAA 359640 36 100.0 30 .................................... TAAGTCGTTGGCTAGTTACAAAAAAGATGA 359574 36 100.0 30 .................................... CACATCACTGTGAGCAGACCCCGTCTCATT 359508 36 100.0 30 .................................... GGAATTGAGTACCTACTATTGTTGAACTCT 359442 36 100.0 30 .................................... AACACCGCTACGATTGTAGGCATAGACGAT 359376 36 100.0 30 .................................... TGCTTCAGGCACGAAATTGACGACATAAGC 359310 36 100.0 30 .................................... ATAGCAAAAAATTTGTCAATGTGTATACGA 359244 36 100.0 30 .................................... CGATCAGCGTTCTGTCCTGGAGCAAACTAA 359178 36 100.0 30 .................................... AATCCACTTATTGTAAGCATATCCAAACAT 359112 36 100.0 30 .................................... ACTAATGATTTTGAAGCGTCATGAACCAAT 359046 36 100.0 30 .................................... AGTTTTGATGGTGCAATAGTAACTGCAAAG 358980 36 100.0 30 .................................... AAATATTTCTCCGTCTGTTGCTTGGTATGA 358914 36 100.0 30 .................................... TTTCGTATCACATATGATAAGCCTGCTCTT 358848 36 100.0 30 .................................... CCAATCAATAAACCAGTAAGCCGCCGTTAT 358782 36 100.0 30 .................................... CATACATATCCATCATTGGGCCATCAATCA 358716 36 100.0 30 .................................... GGTCTAATGCTTTGAGAGGTGGTAAGTGAT 358650 36 100.0 30 .................................... TTAGGCCCTGAACGAGCCGTTGAGCGTAAT 358584 36 100.0 30 .................................... TGAGTGATTTAAATATTGCAACAACTAACG 358518 36 100.0 30 .................................... CTAGCAGCAGGCAGTGATGATTGATCATAT 358452 36 100.0 30 .................................... CCTCAAATCAATAACGTTGTTGCCATATTG 358386 36 100.0 30 .................................... TTATGAACAAGAAGGGTTTAATACAGCTAT 358320 36 100.0 30 .................................... CCTGTAGCCTTTTGGAGCTTAATAAATGAG 358254 36 100.0 30 .................................... AAAATTAACTATCACGCCTACAACATCTCT 358188 36 100.0 30 .................................... GAAAACGTATACAATTTGATTAATGGTGCA 358122 36 100.0 30 .................................... CTGTGCTTTTTTGCTTTCGTGAAAATCTTG 358056 36 100.0 30 .................................... GGCTTCACGCCTGATATTCTCGCGTTCTAC 357990 36 100.0 30 .................................... AGTATTTATACGTTTTAGTATTTAAAATGG 357924 36 100.0 30 .................................... CAGTCATTGGATATTTAAGGAGAATAACAT 357858 36 100.0 30 .................................... TGCTTTAATTTATCAAGAGTGGCTATCCAG 357792 36 97.2 0 ...................................T | ========== ====== ====== ====== ==================================== ============================== ================== 42 36 99.9 30 GCTTTAGATGTGTGTCAGATCAATGAGGTTCAAACC # Left flank : ACCACGCAACTTGATGTGAATAAATTGTATCAAAAAAGTATTGTCACTACGGTGAAAAAATATGCAGATGATCAGGCATTGGCGCAATTTTATAGGATCAATTCCGAGCTCAACCAACTACTAGAAAATATGATATTAGAAAATAATTTACCTTTTTATTTTCAAACAGAATTTAATATTGTTGATCTGATAAATGAGAAGAAAATTAAGATAGAAACGCTGACAAATAGCTCTGGATTTGGTAAAATAGAGGATGTAGTTAACGTTGCTGGTGAGTTTTCAGAGCAACGTTTAATCGTTTTTACTAACATCTATTTATTGTTATCGGTTGATCAGATTGACTATCTGAATGATCTAGCAAAAGCAATGGATTTATGTTTGATTTCTCTTAATTTGACACAAAGCCCTGTTATGACTAATCAGGGTTCGTCTTCAGAAATTTTCATTGATGAAGATTTCGTTCAATTTGGCACTGACTAGCCAATGCGAACAGGCGGTCT # Right flank : CCAGATTTTAATTAGTCTGGTTTTTTTGTGGTTTCATTAGCATTTTTAATGTATATCATTAATTACTATATTAATGTGTATCATGTGATTGCTAATATGGCAATATTTAAAAATTAGGAATATGATATTCTTATAGAGAATAGAAGGATGAAATGTTTTATGGAAAAAATCAATAGTAGAATGGTCTTTGAAATTATAACGATTATCGGTATTCTAATTTTTGCCGTCATCAGTTTAATACCATCAGTGGTGAAACATAAGAGTGTGCAATTAGATCACGGACGCATGACTTATAGTGGGGCGATGGTGAACCATAAATTTAATGGTCACGGGACGTTGCAAGTTCAAAAAAAAGGGACCTATATCGGTAATTTTGCGAACGGCCGTTTTGCTGGTTCCGGTGAATTTATTGCACTGAATGGTTGGCGCTTGCAAGGTGATTTCAGTCAGAGCAAACTGAATGGCGTGGTCAAGTTGCATGTTGGCAATAAGACTTACGC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTTTAGATGTGTGTCAGATCAATGAGGTTCAAACC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-2.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.78 Confidence: MEDIUM] # Array family : NA //