Array 1 114641-112879 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABHLV010000002.1 Desulfovibrio vulgaris str. Hildenborough, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 114640 32 100.0 34 ................................ ACTTACGCCCTTGAGCAGAACGCCGAAACGCGCC 114574 32 100.0 34 ................................ CATGCGAGGCTCCGCTAGGCGGCTTGCCGATTGG 114508 32 100.0 34 ................................ ACAGTACATGTTGTGCAAGGCCAAGCCGATGCGC 114442 32 100.0 34 ................................ GCGGGCGAGGGCCTCGGGCAGATGCAGCTTGGCG 114376 32 100.0 36 ................................ TCCACGACCTCGACCCCCGTTTACGGCGGCGCGGTG 114308 32 100.0 34 ................................ TCAATGTCGACGTCAGACCATGTCAACCGCAGCA 114242 32 100.0 35 ................................ CTTGTCCACGTCCGCATTGAAGAACTTTTCCACAA 114175 32 100.0 34 ................................ CCGGTTCTGGAAGTGACACTTTTGACATCTATCT 114109 32 100.0 34 ................................ CCCGCCGTCCTGCTTGCCCTCACGGTCGAGCGGG 114043 32 100.0 36 ................................ CTGAACAAGGATGCAATCCGTTGCAAGCTTGCAAAG 113975 32 100.0 35 ................................ TTGTGGTTGCTCACCCATGCCAGCAACAACCGGAA 113908 32 100.0 35 ................................ TCATGCCCCCACTCCCATCGGTAAAACGCCCCTCA 113841 32 100.0 34 ................................ ATCGAATGGGCGGACGTGCTCATGGTGCTGTGTC 113775 32 100.0 33 ................................ GAGGTGCAGTCATGAGCAAAGGACTGAAGCCAT 113710 32 100.0 36 ................................ ATGTGCATGACGGTCACCACGAGGGCGGTGTCGTTT 113642 32 100.0 35 ................................ CATGCTGTTGATAAATAGAGCATGGAACAAGCATC 113575 32 100.0 34 ................................ ACTACCGGCCCGAATAGCCGAGACATGCCCCGCA 113509 32 100.0 36 ................................ GCCGGGGCACAGGCGCAGTCCGAGGTCACCACGAAG 113441 32 100.0 33 ................................ CCGCTCATTCGAGATGAAGGTTGCAATCTCTAC 113376 32 100.0 34 ................................ CACTCGCGGGCGGCATAGCGGGGACCCGCCCACC 113310 32 100.0 35 ................................ TCCCAATTGCGGTCGGCGTACTTGTGCGCCCCGAA 113243 32 100.0 36 ................................ GCGCTGCGGCCCTCAAGTCCAAGGGACTCGACGGCG 113175 32 96.9 34 ..........G..................... CACCGGTGCATGAATGAGGGGTGCGTCTTGGCTG 113109 32 100.0 35 ................................ TCTTGACCCACTCGCGCCGAGGGAAGCCCTTAACA 113042 32 100.0 33 ................................ CGGTGTAGGCGAGCATGGCGAAACGCGAGACGG 112977 32 100.0 35 ................................ AGCGAAAGTGCCCACGCATCAGTCACCTTGGCTAT 112910 32 93.8 0 ........T.G..................... | ========== ====== ====== ====== ================================ ==================================== ================== 27 32 99.7 35 GTCGCCCCCCACGCGGGGGCGTGGATTGAAAC # Left flank : GGCTACCCGCCCTTTGTATGGAAATGACGCCATGCTCGTATTGATAAGCTATGACGTGAGTTTCGAAGACCCGGGCGGACAGAGGCGTTTACGGCGCATCGCCAAGGCATGTCAGGACTATGGACAGCGGGTGCAGTATTCGGTCTTCGAATGCGTGGTCGACCCTGCACAATGGACGAAGCTCAAGCATCGGCTACTCAGCGAGATGGATGATGAGAAGGATTGCCTGCGCTTCTACTATCTGGGGGCCAACTGGAGAAACAAGGTCGAACATGTGGGCGCAAAGCCCGCCTACGACCCCGAAGGCCCCCTGATTCTGTAGCGCGAACCCCAAGCGACCCTGTTTTTCCCGGCAGGTTCGCGAACATGACAATGACCTGTTTTCATTGAATTGCGTAACCTTTAATGCAGGCTGGTCACACATCTTGGCGGTGCTGCTGGCCCGGTTCGCGGAACCCTCGTCGCAAGGTCAATACTGCCAACGTGTTTGATGGCCGACA # Right flank : AGCTCTCCCTCTTTGACGACAGCGCGGCACGCCGTCGCCCCCCGCACAGGGCTTGGGAGGCGTCAAGCCGGCGAAAGACCAAAAAACGAGAGATTCAGCGGGGCCGTCACCCGCCTCACAGGAAGAGCAGCAAAGACAGGGCCATCACCCCCATGCCGGAGAAGACGCCCAGAATGCACAGGTGGTGCTCGCCATACTCCTCCGCCGACGGGAGCAACTGGTCGAGCGAGATATAGACCATGATGCCCGCCACAGAGGCGAAGAGCAGACCGAACACCATGGGCGTGAAGAAGGGACGCAGCACCACATATCCCACCAGGGCCCCTATCGGTTCGGACACGCCGGAGAGAAAGGAATAGAGGAACGCCTTCCGGCGGTCGCCCGTGGCGTAGTAGATGGGCACGGAGACGGCCATGCCCTCGGGGATGTTGTGAATGGCGATGGCGACGGCGATGGCGACGCCAAGTGCCGGGTCGCTCAAGGCTGCCGAGAAGGCGGCC # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCCCCCCACGCGGGGGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCCCCCCACGCGGGGGCGTGGATCGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.50,-11.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [28.3-40.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,10.42 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //