Array 1 1737257-1736741 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP016044.2 Edwardsiella piscicida strain S11-285 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 1737256 28 100.0 33 ............................ CGTGAGAAGTTGCAACGGCGTTACGATCGCGGC 1737195 28 100.0 33 ............................ CGCTGATTCTCTCGATTACATCAAAACGCTGCC 1737134 28 100.0 33 ............................ TGCTGACCGAAGCCATTGCTAAGATGCAAGCTG 1737073 28 100.0 33 ............................ TCGTCACCATCGAGGATGCCCTGGCCGGTGGCT 1737012 28 100.0 33 ............................ TAACAACACGGTAATCGACGTCAACGGTCGTCA 1736951 28 96.4 33 ..C......................... CCCGGCATGGTCTGGCGGCTTGTCTATTGTACT 1736890 28 96.4 33 ..C......................... CGAGGGAGCTACCATCGAGAGCAGCCGTTAGGC 1736829 28 96.4 33 ..C......................... TACGGATTATCCCGCCTATCTGGTAGCTGATAT 1736768 28 96.4 0 ..C......................... | ========== ====== ====== ====== ============================ ================================= ================== 9 28 98.4 33 GTTTTCCCCACGCCTGTGGGGGTGTTTC # Left flank : GAGGCGAAGCGTTTCCCAATGCCAAGAAAATCATGTAGAGCGCGAGCGTTACAAAGTAGAACGGATTCATTGGAGATAGTACCGTTGAAAACGGGGATGAGTTGACTGGTCATTTTTTGCGTCCTAGTAGATTGTTGATTACCCCTGTTGATAAGGGTGGTCGGGTACTTCAACACCGCTACTAGACGGCCTGTAGTTTTTCCCAATAAGTTGGGTGTTATATGTACTACACGCTACCCGACCATAATCTATGGACGTAAAAAACCGCATATCTGTCGGGTGCGGAGCTCCGCTAGTAGACGGTGTGTTGAGCACCTGAGCGGACTATACCCCCGACGCCGCGGGTAAAACCAATTCCGATTTATGATACTTTACTTACAAATCATAGGAATTCAATGAATCATTCTAGCCTGACCATACAGAGCCCCATCTGGCTATTCGACCAGTAAACCAACCACAATCTGTAGCTGGTTTAGTATGTTCTTTAACAATATAATGGG # Right flank : TGGTTACACTGGGGGTATGTACAGAAAGCTGATGAGTCATTTTTCTGTGTCCTACGTATATGTTCAAATTTACCCTGTGTTCGGCAGGGAGGCCGGGTACTTGAACACCGTAGAAAGGTCGGCCAGCAGTTTTTCCCTTGCGGGTGTTGTATGGTCTGCTCGCTACCCGGCCATATCTGAAAGTATGGACACAAAAAAACCGCATGTCTGACGGGTGCGGAGGCCGCGTTGAAAGGTGTTTTCAGCACCTGAGCGGACTATACCCCCCGACGCCACGGGTAAAACCAATTCCGTTTTATGATACTTTACTTACAAATCATAGGAATGCAATAACCATCCCCTTGGAACAGTGAGTGGCATATATTTCCTAATTCTCTTAAAAACCGCCCATTCCAGGACGCCAATCCCAGCAACAGATTTTGCCGCTGCCACTACTCTCTAGCGCTCACAATTCCGATGGGCAAGAACTTGCGAAAACATAACAATATTGTTATGTTTCA # Questionable array : NO Score: 6.18 # Score Detail : 1:0, 2:3, 3:0, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTCCCCACGCCTGTGGGGGTGTTTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCTTCCCCACGCCCGTGGGGGTGTTTC with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-0.90,-3.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [58.3-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.87 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 2747119-2746664 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP016044.2 Edwardsiella piscicida strain S11-285 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 2747118 28 100.0 33 ............................ CCCTAGATGGCTCTTTTACTTTGTTGATGGCCT 2747057 28 100.0 33 ............................ TCCATGATGGCCGCTTTCAGCTCACTCCAGTGG 2746996 28 100.0 33 ............................ CTTCATTATTCCTGGCGACTTCAAAAAGAACTC 2746935 28 100.0 33 ............................ CGCTGGCAGACAGAGATGGCCTTAGCCCTTGGA 2746874 28 100.0 33 ............................ CCATCCCGCCGATCGTGGTGGCCCGACGAATTG 2746813 28 100.0 33 ............................ TTCCTCAGTCATTCCTGGGAAGTTGCTTATCAC 2746752 28 100.0 33 ............................ CTCTTTCCCGTGGTCTCGGTTGTTATCTTCGAC 2746691 28 89.3 0 .........................GGA | ========== ====== ====== ====== ============================ ================================= ================== 8 28 98.7 33 GTCTTCCCCACGTCCGTGGGGGTGTTTC # Left flank : GAATCTCTGTATCGATCTTGCCTTCTCCCTGACGCGTGAGATGGCGGGGCGTTATGAGAAGGCTCTGGTTTCATCTCGTTTTCGAGAGCGGGTGATAGAACTGAATTTGCTCGCGAGTGTAGCCAGAGATATACCACAGCTACTTGGAGGGGCAAATATTGATGCTGATAGTTCTCGCTAACGATTTACCTCCAGCAGTTCGAGGACGAATGAAACTTTGGTTTATTGAACCGCGGCCAAATACCTTCGTTTCCGGTATCAAGGATTCGGTTGCTGACACCGTGATCGAATACCTTTATCAACACTGCTCACCGGCAGCGGGTGTGGTGATATTTAAAAGCATTGCTAGAGCACCGGGGTATCAGATCCATACCATAGGATCACCGACCAAGACGCTCTGTGAGATAAATGGCCTGCAGTTGGTGGTAGAGAAGCGACTCAACCAGTAAGTCAACCACAATATGTAGTTGGTTTAGTATGCTCTTTAACAATATAATGGG # Right flank : CTGACCCCAATACCTTTCTTGCCTCATCTCGTTTAGTGCTTGCTTCCGCAAGTGTGATGTCCGGGTAGGTTCCGAATGAGAGCTTTTTCTCTTTGCCGGCAAATCGATATTTCATCCGCCAGTATTTTGAACCGTTAGGGTTGACCTGGAGATACAGTCCACCACCGTCAGCGAGTTTATAGGCTTTGTCTCTGGGCTTTGCAGTCTCGACCTGACGCGCATTTAAGGTCGTTTTTGGGGGCCTCATTTTTCATTGAACAGGATAAGCCCCCACTAAGGCCCCCAAACGTTTATAGATTCACGTTGAGATGGGTAGATATCCGTTGACGTCGCATAGCCAGAAAAGAGGGTTTATCACTGATTATAAGAGGGTTTTATTGAGTTTGGTCGATGTCAGGAGAGGGGGGATGGCGTTCCCTGCATACGCCGAAGTTGATATGCAGGGATTTGATATAATTGTGTTTTTATGTGTTCGTTAAACTTTTTACCCGCAATTTTAC # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTCCCCACGTCCGTGGGGGTGTTTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [9,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCTTCCCCACGCCCGTGGGGGTGTTTC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.80,-11.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [51.7-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //