Array 1 531763-529227 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACHLP010000002.1 Paucibacter oligotrophus strain S00239 Ga0436337_02, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================== ================== 531762 29 100.0 32 ............................. CACCATGCGGATTTCTTTAGGGGCCTGCTCAA 531701 29 100.0 32 ............................. AGCCGCTTCATCCCCGGCTGGTACTTCACCGA 531640 29 100.0 32 ............................. CCTTGGCCGACGCCGGTGAGCTGAGCGACGAG 531579 29 100.0 32 ............................. TAACTAAGCCAACTTTTTAATGTGCTGAAGTC 531518 29 100.0 32 ............................. ACGCGTCAGCGCAGTGCTTGCACTCAATGCTG 531457 29 100.0 32 ............................. CGGGTGATGTGCATCCGCTGGTGGCGTCGGCA 531396 29 100.0 32 ............................. GCGGCATGCCGAACGAACTTTATGCATGACCC 531335 29 100.0 32 ............................. TCTGTCTGAGCTGATGCAGTCAGACGATGATG 531274 29 100.0 32 ............................. TGCTGGATCTGCCGCGCAATCTGTGATGCCCC 531213 29 100.0 32 ............................. CTGGGCACCGTGTTGAGCGCGATCGAAGACAA 531152 29 100.0 32 ............................. ATGACGGATCTGCAAGAGCGCTGGGAGCGCCG 531091 29 100.0 32 ............................. ACGACGATGGAGCAGCGAGCTCAGCATCTCCT 531030 29 100.0 32 ............................. CCCAGCAGGGCCAGCAGCAACGCGATCATGGC 530969 29 100.0 32 ............................. AGGATGTGTTCGTCGAAGTGATGAACACCGCA 530908 29 100.0 32 ............................. CCATGCTGATCGCTTTCATCAGCGCCCATGCC 530847 29 100.0 32 ............................. CCTTGGCCCCAGCCAGGGAGCCCGCGCCATAG 530786 29 100.0 32 ............................. ACCCGCAGGCCATAGGCGCCGTGGTGGCCGGT 530725 29 100.0 32 ............................. CATGATTTCCCAGCATTCCCGATCTTCTGGGG 530664 29 100.0 32 ............................. ATCGCCGCGCAGCTGGCGGCCGGCACGTTTGC 530603 29 100.0 32 ............................. CACCGTGCGGTCGACGACCAGGCGGCCATCGC 530542 29 100.0 33 ............................. TTAGCGCGACGGCTTGGCTACTCTCGGCGCCTG 530480 29 100.0 34 ............................. ATGGACAAAACCCGCGCCCTCTATCGAGCCGTGC 530417 29 100.0 33 ............................. TCCAGCACATAGAACTTCGACTGCGGCACCTTC 530355 29 100.0 32 ............................. ACGTTATCGAGCCGACCCCAATGCGACGAATT 530294 29 100.0 32 ............................. TCGCCGGTCGAGTCCGTGACGCTCTTGCAGGT 530233 29 96.6 32 ..........T.................. CTGAGGTGAACGTCTTGAACCGCGTTCGAGTT 530172 29 100.0 32 ............................. CGGACGGCCACGGCGGCGCCTTCGGCGCTCTT 530111 29 96.6 32 ...............T............. CCCAGGCGCTGGCGCTCCAGCTTGAGCCTTGT 530050 29 100.0 32 ............................. GCGCAGATCAGCGCCGTGGCCCGCCATGGCAT 529989 29 100.0 32 ............................. AGCACGTCCGGGTGCTGGCGGTCAAACCACAT 529928 29 100.0 32 ............................. GTCACCGGCTCGGAATTCATGTTCTATGGGCT 529867 29 100.0 32 ............................. GCTTTGAGACATGCCAAACGGCCACCAGCCGC 529806 29 100.0 32 ............................. CCCAGGGCCCTTGAGTACCTGCGCCGCGCCAT 529745 29 100.0 32 ............................. GCCCCCGAGGTGGCCAAGTGATGCTGGAGCAG 529684 29 100.0 32 ............................. CCCTGTTCGTGACGGTCACATGCCCGAGCCGA 529623 29 100.0 32 ............................. CTGGGCGGCAAGAAAGGCAACGTCACCTTGGT 529562 29 100.0 32 ............................. ACGATGACGACAACGATGATGACGGAGGAGCG 529501 29 100.0 32 ............................. TGCCAGCCGCCCGCATCTGCCGGCGCCAACAA 529440 29 100.0 33 ............................. GTCGCGCAGATCGCTGCCACCACAACCCCTGCC 529378 29 100.0 32 ............................. ACGGGCCAGTTTTCGGGCCAGACTTCTGCGGA 529317 29 100.0 32 ............................. GCCACCGGCCCGACCGACAAGATGCTTGGCAC 529256 29 100.0 0 ............................. | G [529235] ========== ====== ====== ====== ============================= ================================== ================== 42 29 99.8 32 GTGTTCCCCACGGGCGTGGGGATGAACCG # Left flank : AGCTGCTGGACCGCATCATCCCGGACATCGAAGAAATCCTGGCCGCCGGCGAGGTCGCTCGACCGGAAGCGCCCGCTGATGCGGTGGCCCCGGCCCTACCCAACCCAAAGGGGCTTGGCGATGCTGGTCATCGTTGTTGAAAATGCCCCGCCGCGCTTGCGCGGCCGACTGGGTGTATGGCTTTTGGAAGTTAGGGCCGGCGTCTACGTTGGCAACTACTCTCGAAAAGTGCGGGAGCAGATTTGGTCGCAGGTGACCGATGGCCTGGAAGACGGCAATGCCGTGCTCATCTGGAAAAGCACGGCAGAGGCGGGTTTCGAGTTCCTCACCCTGGGTCAAAATCGGCGCATGCCTTGTGATTTCGACGGTGTGCAGCTGGTCAACTTCCTCCCCGAACCGCCACCCGACGCTCCTTAAAAATTCGCTTGAAATCGCTGCGATCCTTTGGTGGATTCAGAGCAGAGGAAATTCCTGTTTTAATTCAACGGGTTGGAAATGGT # Right flank : CCCCCCGCTTGGTATCGAGCAAGGGGCTACATGCGCTCGCCCAATACACCGCTACCTCAAGCTAGTGCCAAGCCATTTCTCAGAGCTCGCGACTGATGGTCGTGCAGTTCCACGGTCACCCAGACTCTGGGGTCGACACCACCCCCACCCAAAGTCTCGACGTAGTGGCAAGCAGCGAACTCGGCGGCGGCTTGTTCATAACGGGCAACCCAAGCAGCACGAAGATGCCTGCGCTCGGGGCTGACGGGCCAGACGCCGGGGCGGGGCCGCATATGGGCGGCGATGCCGGCTCGCCAGGGCTTGGCCGTCAGGCGGGCCCGGAAGCAGCGTTGCCTGCGGCACATGCGGGCATACAGCGGGTCGGTGCCCACGGCGGTGAAGAAGTCTTGCGCCTCGGCGGAGTCGGCCTCAAAGGTCTGGTGCGTCGCCAAGAGGCGCAGGCCGGCCGGCGTGCGGTAGAGGCGCAAGCTCCAGCTCGGCCGGCCGGCCAGAAAGCGCTG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCACGGGCGTGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCACGGGCGTGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.60,-11.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [38.3-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //