Array 1 1126-105 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACJKQ010000011.1 Enorma phocaeensis strain An718 An718_contig-115_10, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 1125 36 88.9 30 .A.A..A................G............ GGACATCAGCTCCATCCAGCAGACGTACCA 1059 36 100.0 30 .................................... CGAGGGCCTTTTTTCATGCCGATATGCGCC 993 36 97.2 29 .......................G............ ACCATGCCGGCGAGCACGTCCCACTTCTG 928 36 100.0 30 .................................... AGCAGACACTCGATGTATCCGCTATCCTCC 862 36 100.0 30 .................................... CTTCGAGTGGGAGGGCCTGCCGCCTGAAAT 796 36 100.0 30 .................................... CAAAGCCTAGGATTGTATGTGGTCTGAGGA 730 36 100.0 30 .................................... GTGCACGGCGCCATGAGGCGCACGATGGCC 664 36 100.0 30 .................................... CTCGACGCTAAAGAAAGGCCACATGTTACC 598 36 100.0 29 .................................... ACGCGCGGTGTTTCGAGGCGCTTACTGGG 533 36 100.0 29 .................................... CACGACCCCGCTGACATCCCCACGCTCGA 468 36 100.0 29 .................................... GCGTGCAGCCTCCGCGAGAAGGGGCTGGA 403 36 100.0 30 .................................... ACGGCGACGACGAGCCGGGCGAGTACGGGG 337 36 100.0 30 .................................... AAGTGGGCGCGGTTGTAGACGTCGCCCTCG 271 36 100.0 30 .................................... ACGGCTGTCGACGCTTCGATCGGCGATCTC 205 36 100.0 29 .................................... CTTCGGGACACCGGGAGACGCATTGGAGA 140 36 83.3 0 ...........................TGTT.T..G | ========== ====== ====== ====== ==================================== ============================== ================== 16 36 98.1 30 GTTTGATTACCAGTCAGGATGCCACTGCTCCAAAAC # Left flank : TCGCGGCGGCGATGATGAATGTCCTCATTCCATTCCCCTCCTCTGGGGTAGACTGGTGGTGAGGGACCGGTCTCCCGGCCCCCTTTCCTTAAGGCTTCTTGCTGTGCTTTCCGGGCGGACGAGGAGCCTTTCTCTTTATCGCCTCGACTTCCTCGTCAAGGAGCTTGCCGACGGCAACTCCTATTAAGGTGATGATGAGGCCTCTCTTGAAGTCTTCCAATTCGATCACCTCCCCTCTCGACGCCTTCTATTATATATGCTATCCCATATATAATAGAGGAGGTTTTCCAAGGCAATCGCATTAATTACTATCATTCGGCCATGCCGTCACCATCCATGGTCCTAGCGATTCCGTAGGTGTCGGCGGCATCGATCGCGACGTCAGCGTACCTGCGCGCAGCCTTCTCAGACATCCCACACTCGCGTGCGACACCATCCCATGACTCCCCTGCGCAGTAGCGCCAGAAGAGCACGTCGACGTATGCCGAGCCGAGGAGCGC # Right flank : GCAAATGAAATTGTCACCCCTCGTTTTTTGATTCTGTCACCCCGCGACCCCCCGGTCCCCTAGCGTAGTCCTCAGCCGAAGGAGGACACATGGATAAGAGGACCA # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGATTACCAGTCAGGATGCCACTGCTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:52.78%AT] # Reference repeat match prediction: R [matched GTTGGATTACCAGTCAGAACGACACTGCTCCAAAAC with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.20,-3.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [45.0-33.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,4.91 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 768-270 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACJKQ010000063.1 Enorma phocaeensis strain An718 An718_contig-115_62, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 767 36 80.6 30 A.G..TA..AG..A...................... GTGGTCGTGGCCATAATCCCTCCTATCGCG G [749] 700 36 100.0 29 .................................... TCGACCGTGCACTTGAAAAGCTCTGACAT 635 36 100.0 29 .................................... GAGGACGCGGTCCTCCAGATAGGCGTCAA 570 36 100.0 31 .................................... GACCTGTCAAAGTCTGCTTATGTCGAGATAA 503 36 100.0 30 .................................... AAGGTGGTTGCGTGATAGGTCGACAGGAGC 437 36 100.0 30 .................................... TCGACGTATCCGCCAATCGCCGTTGACAAA 371 36 100.0 30 .................................... GATACGTCGATGATTGTTGGATACAAGTCA 305 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =============================== ================== 8 36 97.6 30 GTTTGATTACCAGTCAGGATGCCACTGCTCCAAAAC # Left flank : A # Right flank : CCGATGAAGCATATTTCTCCCTGCATAGAGAACGGACACCTGCTGGTACACACTTGTCAACCTTCAAGAAAGTGCTGGTCAACAACCATTTTATCCTCAAGCGCATGGAAACTCATGTCGGCGTGATTTTCCAACATGAGCACGCTTAATTCGTGACTTAGTTTTTCATTTCAAGCGCAACGCCCCTGAGCAGGGACCGCCCACGCCGGGCGCTACGATGGTGCTCGCGACAGACTTCATCGGAGGGGGCCGGCATGGGCAGCTACACCC # Questionable array : NO Score: 6.14 # Score Detail : 1:0, 2:3, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGATTACCAGTCAGGATGCCACTGCTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:52.78%AT] # Reference repeat match prediction: R [matched GTTGGATTACCAGTCAGAACGACACTGCTCCAAAAC with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.20,-3.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [51.7-3.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [1.05,4.5 Confidence: MEDIUM] # Array family : I-C [Matched known repeat from this family], // Array 1 31-593 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACJKQ010000064.1 Enorma phocaeensis strain An718 An718_contig-115_63, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 31 36 100.0 29 .................................... TGCCCGCACAGTCTCGTATCGCTAATCTG 96 36 100.0 30 .................................... GCCAGCCACCTGCGGGCGATAGGGCGCAGC 162 36 100.0 30 .................................... CCTTGAGCATGGCGGTAATCTTCTTGGCAT 228 36 100.0 31 .................................... TCGGCGGGCGATGTGACGACGTTGTTCTTGT 295 36 100.0 30 .................................... GCGTTATGGAGTGAGATTCTGACTTGCTCC 361 36 100.0 30 .................................... GCTCCATCGCATCACCTCCACCTAAAGAAA 427 36 100.0 29 .................................... CGGGGCGAATGATTATACGGCATTCTTCT 492 36 100.0 30 .................................... CCCGGCTTGCGGCAGCGGGACGGGGCCGAA 558 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =============================== ================== 9 36 100.0 30 GTTTGATTACCAGTCAGGATGCCACTGCTCCAAAAC # Left flank : AGATGTGTATAAGAGACAGGTCCATGTTTAG # Right flank : ATCTCGTCCGCGCAGGCCACGACGCTAGAGCTGTCTCTTATACACATCT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGATTACCAGTCAGGATGCCACTGCTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:52.78%AT] # Reference repeat match prediction: F [matched GTTGGATTACCAGTCAGAACGACACTGCTCCAAAAC with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-3.60,-4.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [31.7-36.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 470-103 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACJKQ010000072.1 Enorma phocaeensis strain An718 An718_contig-115_71, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ============================== ================== 469 37 97.3 30 ....................................T AAACATGGACCTCTACGAGGTGCCGATAAT 402 37 100.0 28 ..................................... CTTGCGCAGCGTGGCGAAGAGGCGGTTC 337 37 100.0 29 ..................................... TCCTTGCCGCACTTCAGCATCCTTACGGT 271 37 100.0 29 ..................................... CTTGGCCTTGAAGTACGTCTTCGACAGGA 205 37 100.0 29 ..................................... AATGAATAGTGGTATCTTAGTAACCAGCA 139 37 73.0 0 .........................T..TGAAGTTTT | ========== ====== ====== ====== ===================================== ============================== ================== 6 37 95.0 29 GTTTTGGAGCAGTGGCATCCTGACTGGTAATCAAACC # Left flank : AGATGTGTATAAGAGACAGATACGAGACTGTGCGGGC # Right flank : TTTGAAAATGTCACCCCCAGAGACGTCGCGCCGCGTCATCCGCGCATCTTCCTGAGCAGGTCCTGCAGCTCCCTCTGGTTCCCCACGAGGTCGCTCTTCCTGT # Questionable array : NO Score: 3.01 # Score Detail : 1:0, 2:0, 3:0, 4:0.75, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTGGAGCAGTGGCATCCTGACTGGTAATCAAACC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.35%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.60,-4.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [10-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [40.0-33.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA //