Array 1 258750-255598 **** Predicted by CRISPRDetect 2.4 *** >NZ_PYEB01000003.1 Acinetobacter baumannii strain SGH0410 SGH0410.fasta_3_length_454818_cov_32.114198, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 258749 30 96.7 30 .............................C ATCAAAGGCTTTGAGGGTAAGCGCCTTTGG 258689 30 96.7 30 .............................G TTGCGCTGTTTTTGAACGTGTAATTGGATA 258629 30 93.3 30 ............................CC AAAGCGGTTAAGCCTCCAAGATTTGCATAC 258569 30 96.7 30 ............................A. GGTAATACAATTCAATCTCACTACAAGAAT 258509 30 96.7 30 ............................A. ATATTTTACGTGTTGATTCAACTACGGGTG 258449 30 100.0 30 .............................. TGGGGTAACTGGTGCCTTTAAGTTGTTTTG 258389 30 100.0 30 .............................. CCAAAGTCTTGTTCAATATCTTGTTGTTGA 258329 30 100.0 30 .............................. GCTCATCAATACAGCTACAAGAAAATTTGT 258269 30 93.3 30 ............................AG CATAAGCATAAAAATTATGTGTGAATATCA 258209 30 93.3 30 ............................AA TATGCAACAATAGGAAATTGCTCAGCATCT 258149 30 93.3 30 ............................AG TTACATCATTGCTTTTAGTCTTTTCTATCT 258089 30 96.7 30 ............................A. GGGCCGCAACCATACGGTCTATGACTTCCA 258029 30 96.7 30 .............................C ATGATCATAGCCCTTATAGATATCGTATTT 257969 30 96.7 30 ............................C. GCGAAAGCGGGGTTTTTTATTGCCTGAAAT 257909 30 93.3 30 ............................GC ATAGGCATTTACTCCCGCTGTGAGTGAAGG 257849 30 96.7 30 .............................G TGGCGTAGCGTTTCCAAAGTTGCCCATTGG 257789 30 93.3 30 ............................CC AAGCGTGACCAACTCACCAGTTGTCACAGG 257729 30 100.0 30 .............................. TTGAAACTTATAGGCTTGGCTTGGGTTATC 257669 30 96.7 30 .............................G AAAGGGATTTAAAAGCAGTTACATAAAATT 257609 30 96.7 30 .............................G AATTGGATTTCGTAAATCATTGAGCAAGTT 257549 30 93.3 30 ............................AG CATCAAGTAGATCAGCAGTTACCTGTTCAG 257489 30 100.0 30 .............................. CTGTATTAGTGGCCTTCATGTGCATTAAAA 257429 30 96.7 30 ............................A. ACATGCCCACGTTGAAAATCGGGTACCAGT 257369 30 96.7 30 ............................G. ATTAAAACTGCTTATAAACTTTCTTAAATC 257309 30 100.0 30 .............................. GAAAAAAAGCATCATATTGTTCGGGGCAGG 257249 30 96.7 30 ............................A. TTTTTCTGTTAACTCTAAAATACCCTTCCG 257189 30 96.7 30 .............................A AAAGTAGAGAGTGGCGGTGATTCACTAAGA 257129 30 96.7 30 ............................G. TGTCTGATCCGACAATTTGGCTGAGTACGT 257069 30 100.0 30 .............................. GTACAACAATATGACCCGTATCGATGTAAC 257009 30 93.3 30 ............................AA CAATTGCCTGAGTGGTATGAGCCACCAGTA 256949 30 100.0 30 .............................. TGATAGCTAAAGTAGAAATCAAAGTCGCAA 256889 30 100.0 30 .............................. TTATTGCTGGGAATGAAACATCAAAGCAAA 256829 30 96.7 30 .................T............ CTCATCGTGAAGGTTTTGCAAATATGCCTT 256769 30 96.7 30 .............................G TCCGAAATTCAGATGGTGAAGTGACATATG 256709 30 100.0 30 .............................. CAACCTACGCAAGTATTATGGGAACTATTT 256649 30 96.7 31 ............................G. CTTTATCAGTTACGATGGCATGAGTTTTTGT 256588 30 96.7 30 ............................A. AGCACGAGCAAGTTCTTGAGATGCCAAAAA 256528 30 96.7 30 ............................A. ATCTCGCAGATTTGGACAAGGTCACGAATA 256468 30 100.0 30 .............................. GGACAAAGATTATGACTGAGAAAGACGAGA 256408 30 100.0 30 .............................. GGATGTGCAATTTGGTCAAGATGTGGGGAG 256348 30 93.3 30 ............................CG AACACGACTTGAACCAAAGTTAGAAAAATA 256288 30 93.3 30 ............................CA ACTAAAAGCTATTTATGGGGGTAAAAATTT 256228 30 96.7 30 .............................G TCATTGGCCGGCCATTCACAACCCCGATAA 256168 30 93.3 31 ............................CC AAAAAATGAGGAAATTGGACAATATCCAACA 256107 30 96.7 30 .............................G TTGAACGAGTTATTCATAAGTGCCCGAAAT 256047 30 93.3 30 ............................AG CGGAAATCTTTTCAAGTGCGTAGGGGATAA 255987 30 100.0 30 .............................. CTCCAAGTAAAGAATAAAACAATATACCGC 255927 30 96.7 30 .............................C AAGGCGATCCACCTCCCGTCACAGTCATTT 255867 30 93.3 30 ...........T.C................ TGCTAAAAGGATTTATGCTTTAAAATACTT 255807 30 86.7 30 .......A.....C...T..........G. TGGCGTACGGATAACGGAAGAAAGCATAAG 255747 30 86.7 30 .......A.........T..........AA ATAACCACGGTTGTGGTAAGTCACTTTTAC 255687 30 80.0 30 .......A.A.....T.T..........GC GTTCAGGTTGAGGAGATGAAGTGATGTGAT 255627 30 70.0 0 ...T...A...T.....T..C...AGCG.. | ========== ====== ====== ====== ============================== =============================== ================== 53 30 95.5 30 GTTCATGGCGGCATACGCCATTTAGAAATT # Left flank : GGCAAATGGCTAGAACGATTCATTGATTATGTACATATCACTCAACCGAGAGAAGTGCCTCGAGCCAAGATTACAGGTTATGCGCATTACTATCGAGTTAATCATAGAATGAGTGTTGAGGAACGTATAGTTCATCAAGCACAACGTCGTAATATTTCTTTGGATCAGGCTAGACAGCATTTTAAACAATATGTTGAGCAACCAGTGGTTGAACCATACGTAAGTTTAAAAAGTCTCAGTGCAAAACGTGAGGAAAATGTAGATCGCCCCTATCGTTTATATATTGGTAAATCACTTGTTGATGAGGCAAGGGATGGGATGTTTGGAACTTATGGACTAAGCCGAATGACAACAGTCCCAGAGTTTTGACCCAATATTTTTTCTATTCTTTAACAGCTCAATAAAATCAATAAGTTACAATAGGTCTTTTTTGATTGGGTAAAATGCCAAAATCCATGATAAACACTTGTTGTAACTTATATTTTTACTATAATTTTATA # Right flank : AAGATAAAAAAACAAATGATCACTGCTTAGTATTCTTTATCTTTAAATTTTAAAGAAGAAAATATATTCTGAGCTCAAGATATTTAGTGGTGAAATTTTTATGCGCGGTTTATACCTCATTACCAATGATGACCCAATCCAATTATTATTAGAAAAATTAGACGCCGCACTCGCAACCCGTCAAATCGCAATTTTACAGTACCGCCGTAAAAAAGTAGACAAAGCCGACCAACCTGCTGAAGTTGAACAGATCAAACAATTATGTGAAAAATATCAGGTTCCTTTTGTCATTAATGATGACCTAAAACTGGCTGCTCAGTTTGGTTTAGGTGTGCATTTAGGTCAAAGCGATGGCGAAATCACCGATGCAAAATCGCAGTTACCAGAAGGTGTTATTATTGGCCGTACTTGCTTAAACTCATTAGAACTTGCCCAAAAAGCTATTGCCGATGGTGCAACTTATGTTGCCTTTGGTGCGGTTTATGCAACTGCCACTAAAC # Questionable array : NO Score: 5.35 # Score Detail : 1:0, 2:3, 3:0, 4:0.78, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.31, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-6.60,-8.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [20-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //