Array 1 37824-37127 **** Predicted by CRISPRDetect 2.4 *** >NZ_NAQR01000043.1 Dolosigranulum pigrum strain KPL1937_CDC4199-99 NODE_68_length_127881_cov_108.906242, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 37823 36 100.0 30 .................................... GGCATATCCTCACAAGATGCTTTGGTCTGA 37757 36 100.0 30 .................................... TATTAGAAAAGTTGGAACGTGGGAAGATAG 37691 36 100.0 30 .................................... TAATCATTCTAATGAGTTATTTAAATATAA 37625 36 100.0 31 .................................... CTATTTACCCGTCAACAACTGAACTAAAGCA 37558 36 100.0 30 .................................... GTCGTCCCTCATACATATCTCCTTTCATCT 37492 36 100.0 30 .................................... GTAATGATTATTTAGAATTTGCAATGAAAA 37426 36 100.0 30 .................................... TGTGTTACTTACAACATCATCTAACTTTGT 37360 36 100.0 30 .................................... TTTCGTCGCATACGCTCCAACCGCTAATAA 37294 36 100.0 30 .................................... TGCTGGACAATCCAGATTTACTTATTCAAG 37228 36 100.0 30 .................................... GGAAAAGTGAAGAATATTAAGAATGATCAT 37162 36 94.4 0 ..............................T....T | ========== ====== ====== ====== ==================================== =============================== ================== 11 36 99.5 30 GTTTTAGAGCTGTGTTGTTTTGAATGACTCCAAAAC # Left flank : GACTAATCAAATTACTGAACTGATTAATGCAGAGGTACTGAATCATGAATTGGATTTAGAACTTGATGAAATTACAATCCAGGAAGTACTTATCGCTTTAGGAGTGAAGATAGAAGTTGATACAGATACACTATTTGAAAAGGTGTTGGAAATTTTTCAAGTCTTTAAATATTTGCGAAATAAAAAATTACTAATACTTGTAAATGCAGCTTCATATTTTACAACCGAGGAGCTTAATGAAATGGCACAGTTTGTCTCATTGTTACAGATGAATGTGCTGATGATCGAACCAAAACCGACTGATTCTGAGATAACACAATATATCCTGGATTCGGACTTCTTTTTAACCATCAAACATGGTAAAATGAAGTAGAAGATAAACTAGAAAAATAGGAGTCGTTCAAAGCTGAAGTTTTGCATGGACGAATGGCGTGATTACGAAATTTTGTGCAAATTTCTTATGAAAATCATGATTTTTTAGAAAAGAAATACTGTGCGAG # Right flank : GATTGGTCAGATAACTTATGAGATTTAGAGTTATAGTGTATTGATTTTTGATGTAATAATTATTAATGAAACATATAATCCTGTTTAATCTTCTAGTCAAACTAGCTAATTAAATAGGGTTTTTGTTTATTCAGGAGACAAGCTATTTGTGAAGTGTTTCCCGTGACTATTAGTCGAAATTGCAGGGGAAATATGCGATAATGTAGAGCAAGGAGTGATGGCTGTGAGTAAGGAATTGTTAGTATTGATTGATTATGAAGTGGATGTATTAGAGACGTTTCGAGAGATGGCTAGTGAATATCAGTTGGTGAGTGAGTTTGAAGAAGCTGATTTTTCGAAGGTTGAGATCGTACTGGGTTGGGATGAGCGGTTAGTTGATGTGCTTGAGTCTGGTCAGCATCAATTGAAGTGGATTCAACTGCCGACAGCTGGCGTGGATAAGTTGCCACTTGATTTACTAGCGCAAGAAGGGGTGCGGTTGACTTCAGCGAGCGGAATGC # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTGTGTTGTTTTGAATGACTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: R [matched GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC with 92% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-2.30,-2.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.91 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //