Array 1 43270-40992 **** Predicted by CRISPRDetect 2.4 *** >NZ_LAYQ01000010.1 Corynebacterium minutissimum strain 1941 Contig_10, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================= ================== 43269 36 100.0 28 .................................... AAGCACACCTTCACCTGGTCGCAGCGCA 43205 36 100.0 28 .................................... GATGGCGACGATGATGGTGGCCAGCTGT 43141 36 97.2 28 ........................T........... GATGGCGACGATGATGGTGGCCAGCTGT 43077 36 100.0 28 .................................... CGTGAGGCAGATACGCGCGCCCCTGTAG 43013 36 100.0 28 .................................... CGAAATGCGCCGAAGCCCGCCGAGTTTG 42949 36 97.2 28 ...............C.................... CGCCACACCATAGGCGGTGCGGGCCGAG 42885 36 100.0 28 .................................... CGCCGCCACCCGGTTAATTTATCCAGAA 42821 36 100.0 28 .................................... GCCGACACCGAGGGCTGCCCAGAGCAGG 42757 36 97.2 28 A................................... AAACACCCCAAACACCCACAAAACAAAT 42693 36 100.0 28 .................................... AATCCGGGCGCGTACCGGTGGCACTGCT 42629 36 100.0 28 .................................... CCACCCTTGCCCATACCCGCGAGGAATA 42565 36 97.2 28 ....................C............... TCTCGCCGATGACGTCGGCGGCGTACTC 42501 36 100.0 28 .................................... TGCACTTTATCGTAAGTGCGGAACTCGA 42437 36 100.0 28 .................................... CCACCCTTGCCCATACCCGCGAGGAATA 42373 36 97.2 28 ....................C............... TCTCGCCGATGACGTCGGCGGCGTACTC 42309 36 100.0 28 .................................... AGAGTCTCCGTGTCAAGTCGACGGCCAC 42245 36 100.0 28 .................................... AGGAGCGGTTGATCTTGCCGAGGGATAC 42181 36 100.0 28 .................................... GGAGCCGCGCCCTTGGATACCGACGACT 42117 36 100.0 29 .................................... CAAAAAGAGTACGAAGCAGCCTGGGACAG 42052 36 100.0 28 .................................... TCTCATCCGGCGCACCATTCGGCTCCAC 41988 36 100.0 28 .................................... TTCACACTAGGCGAAGACACGGAGGCAA 41924 36 100.0 28 .................................... TGAACGCGGTCGGGTCAGGGATGCTCAC 41860 36 100.0 28 .................................... CGCGGGCGTGTTGGAGTAGTTGGCCAGC 41796 36 100.0 28 .................................... CGGGGCCAGCTGGGAGGCCCACTGGATA 41732 36 100.0 28 .................................... TCCTTCCCCCACTCAATCACCCGCAGGC 41668 36 100.0 28 .................................... TTGTCGAATACGTGAGCTCGAATCGTGA 41604 36 100.0 28 .................................... CCTATCCCCAGGGGTCGGCTACCAATTG 41540 36 100.0 28 .................................... CGCGAAACCCAACGAGCAACCCACCAAG 41476 36 100.0 28 .................................... ACCAAGTCGGAGGAAGTCAAGAGCATCC 41412 36 100.0 28 .................................... CGCTGAGGGGCGCTATCAGCAAGGGGTA 41348 36 100.0 28 .................................... CAGGCGGGCATCGGCATCAGACACCAAC 41284 36 100.0 28 .................................... GTTCACCATCCCACTCACCTTTATCAAA 41220 36 100.0 29 .................................... AGGATTTGAGTGTGGGGGATGTCGTTGAT 41155 36 100.0 28 .................................... ACCTGCGACTGAAGGTGCGCGGCGAAGA 41091 36 100.0 28 .................................... TCGACAGTCGCTAGGTGGGGGACTCGTT 41027 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================= ================== 36 36 99.6 28 GCTGGGGTTCAGTTCTCATTACCCCTGATAGACTTC # Left flank : GCGCAACTTCGGCACGGGCACGGTGGCCACGAACTTGATCTCGGAGCGGGAGTAGCGGTCGTGGCGCGCACCCGCGCGCTCTGCCAATCCCTGGTAGATGCGGCGCTTGCGCAGCAGTCCATCACGAAGTGCGAGCGCCTCCATCAGCGTGATCTCTTCGTCGAACGGGGTGGCCGTGTTTGTGGCGTTGATCGCGATGACGAGCTCATCGATGCGCTTGGTTACGCCCTCCAGCTCACGGAGGAGATCCGTCGGGTTCTCATCCGGTTCATCGCCTTCCTGGATGCGGACGGTTGCCGCGAGTCGGTCACTCAGCGAGTTGAGGCGCTCCTGCGCCTGGGCGCGCTCGGCCAAGGCTTCAGCAAGTAGCATGGTTCCTCCTTAAGAAGTTAGAGCAATCAAGTTAAGGCTACGACGCTCCGCTGTCAATAGGAGATGGAAAGAATTTCAAAATCGTCGTGACAGCTTGGACTCCATGGTCAAGGGAATCAGCATCATCG # Right flank : AGTGCAGCCCCAAAAGGGCTGTTCTACTGGAGTTTATCGGTGATCCTTCGCTAAAAAATCGTGAGTTGAGGTGGGGTATTCTCCATTTTGGAAGGTTCCGATTTGGAAAAACGAATCGCCTTTGACCATTGAACATCAGTGACGGATATGATTCTCACATCTCCGTCTTCCGGTAGGCTGGACTTGATTTGTTTGACGGTACTTGCGATACGGGAAGCAAGAGGGAAGTACTGGACGTAAACGCTTAGTTGGGATCTACAAAAGCCCAGGTCTAAAAGATGGTTTCGAAACCGGTTAGCCTCTCTGGTTTGAATTTTTGATTTTACGGGAAGATCGAACATGACCACGCACCACATTGGTTCACTATCTTTCGCCGGCATCGAGTTTTCCTTCCCAAACCGGAACTTTTAGGTGATTTATATTTCCTTCGATGTATAGGCCATATTGTTGGCTGAAGTCATTAAAAACTGTGGTCAACGATTTTCCACTGGAATCGAACG # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTGGGGTTCAGTTCTCATTACCCCTGATAGACTTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [12,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GCTGGGGTTCAGTTCTCAAAAACCCTGATAGACTTC with 92% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-2.70,-1.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [53.3-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [1.15,4.5 Confidence: MEDIUM] # Array family : II-C [Matched known repeat from this family], //