Array 1 17343-16669 **** Predicted by CRISPRDetect 2.4 *** >NZ_VILC01000068.1 Aphanizomenon sp. UHCC 0183 scaffold68_cov0, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================= ==================================================== ================== 17342 23 100.0 50 ....................... GGTACAACTGAACTAGAAAAACAGGATTTTTATGAAGTTTCCGCATATCT 17269 23 100.0 52 ....................... AATATAGTTATGTAAACAAAAACACGCAAAACACAAAAGTTTCCGCATATCT 17194 23 100.0 51 ....................... AATACTTGAGTCATTAATAAAACAGCAGCGTTGTATGGTTTCCGCATATCT 17120 23 100.0 36 ....................... ATCACGATGGTGAAACGTTAACGTTTCCGCATATCT Deletion [17062] 17061 23 100.0 51 ....................... AAAACGTGCATCAATTCTAGCGCAACGTTGTATTAGCGTTTCCGCATATCT 16987 23 100.0 52 ....................... GGTTATTTTTATCAGGACAAAGCGATCGCTGCAATTGCGTTTCCGCATATCT 16912 23 100.0 52 ....................... ACTGTATGGTTATCTGATAACCAATAAGAATCACTAAAGTTTCCGCATATCT 16837 23 100.0 49 ....................... TAGAGCAAAGACTAGAATATAGCGGGCAAAAAGAAGTTTCCGCATATCT 16765 23 95.7 51 .............T......... AGGCGTACAACTACGATAGGTACAAAAATTGTCCTAAGTTTCCGTATATCT 16691 23 87.0 0 ..C...............T..G. | ========== ====== ====== ====== ======================= ==================================================== ================== 10 23 98.3 49 AATCCCCGCAAGGGGACTGAAAC # Left flank : CTGATTATTTATGACTTACCTGACAATAAAGCTGCAAATAAACGCCGCACTCGTTTACACAAAATGCTCGGTGGTTATGGTAAATGGACTCAATACAGTGTGTTTGAGTGTTTTTTGACTGCTGTACAATTTGCTCAGTTGCAAACCAAGATAGAAAAACTGATCAAGTCTGATGAGGATTCTATTAGAATGTATGTGCTGGATGCTGGGAGTGTGAAAAGAACTATTACTTATGGTTCGGAAATTCCTAGACAAGAACAGGCTATCATTATATAATTGATACATCAGCTTAAATTTTTGGCAGACCTAGAGCGGGGTCAAAAACCCTGGAGATTCGCCAAACAGCCAGAACCTTGACAACTAAATACTTTCAGCGTTTCATTAGTTTCAGTTGGCGCTTGACCCGAAGCCTGTAATAAGGTTTTTTGAGAGGTCCGCCAAAATCGTCTCTGGATTCCGCCCCCAGTTTATGTTTCAGACGGCGGGGTTTCCGCATATCT # Right flank : TACCCTTCCACTGCGGCTCAAAAAGTTGCGGAATTGGACGTGTGGGTGCGAGAACTGAAGAAACGGATGCCATCTAGTCATCATTGATTATTTTTATTGATTTAATCCCTTGGCTACATCTTTGGACTAGCAACCATTTTTTAGCTTCAGGTTCAAGGGCTGGCTTAATACGGAAGTTTAAAACATCTGCCCAAGTTTCTACTCCGTAACTACTAGCGAACGCCCTTTCAAGTTCCTTGAATTGTAACCAGTTGCGATCGCTGATAGCCTCAAAAACTGAGATAAATGTGTTCAGTGGTAGCAAGGTAGCTGTTTCACTCATTTTCGTAATCCTCAAAAATACAAACTATCGGCAAGATGTCATCTTCTATATCAATGACTTCAATTAGTCGTTTTCCCGGACTTTCAATGACATTTTTCTATCTCCGTTCAACTTCCTTAATGTATATGAAAAATAAATATTTGACAAGTGCAAAGTAACCATAACCAGTTATATTGAT # Questionable array : NO Score: 5.86 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:-0.30, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AATCCCCGCAAGGGGACTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [8,10] Score: 0.37/0.37 # Reference repeat match prediction: R [matched AATCCCCGAAAGGGGACGGAAAC with 92% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-10.40,-9.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [46.7-43.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 15462-15130 **** Predicted by CRISPRDetect 2.4 *** >NZ_VILC01000083.1 Aphanizomenon sp. UHCC 0183 scaffold83_cov0, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================= ================== 15461 37 100.0 41 ..................................... CCATCGCGCCAAGCAATTGCTAGACCACAGAATTGAGAATG 15383 37 100.0 34 ..................................... TCATGAATTTAGATATGCCAGTGGATCAAGTTTG 15312 37 100.0 37 ..................................... CTTATTCAGTTAATACTTTTCAAGCTTGGCAGTTTAA 15238 37 100.0 35 ..................................... ATTGCTAATTATGGATTTTCAGATGTAGCTGAAAT 15166 37 97.3 0 ........................A............ | ========== ====== ====== ====== ===================================== ========================================= ================== 5 37 99.5 37 GTAACAACAACCCTCCTAGTACAGGGTGGGTTGAAAG # Left flank : CAAAGAATTAGCTCTCTCTACTTATAATCTCCGCCTAGTCAAACAAAGTTGACAAATATCCGAACCTTGACAATAAAATAGATTTAATAGCGCCGCCGTTCATGCTGCTTGCAGCCTCTGAACAGTGTTAAATGAGGGTTAGTTTGACTGTAGCAATACAGTCTTGCTTTCTGACCCTGGTAGCTGCTCACCCTGATGCTGCTGTCTTAGGACAGGATAGGTGCGCTCCCAGCAATAAGGGCGCGGATGTACCGCTGTAGTGGCTACCGAATCACCTCCGATCAAGGGGGAACCCTCCTCAATTCTTCATTTGAAGAACTAAAATCAAGGCAAAATTTCTCAGAGATCCGCGCAAGTCCCAAAATGCTTGTTCTGTCGAAATCTCATCGTTTTTTCATCCTGATATGATTTTTGTAAATGAGGCTCAAACAGCAAATTGGGAGACATCCGCGCTAACGACACCTGGAAACCTTGCCCTACAATACTTTGAAACTTGGTGG # Right flank : TAGCGAAAGCACATTCAACAATGGTTATATTGAAAAAGCTTGAAATTGAGATTATTTTTGGGTTTAGTAACTATTAAAAAATTTAGGGGGGTTGAAAGCAAGTCCTTTTATCCGCTTGTTCTATAATGATGACAAGGATAATTGTTTTTATGACATTAATTTGTCACTACCATCAAAACGACAACAAATAGTCACAGCGACACTAATTTGTCACCGATGACATATAATTAGTCACTGTACATCGCTGCACAACATCACTATTAACTCAACTATCTGTTTAAAAGTGCGGATAAAAGGACTTGAACCTTCACTCCTTTCGGAACTAGAACCTAAATCTAGCGCGTCTGCCAATTTCGCCATATCCGCATTTATAACTTATGTTAGCACAACAAATTATTTATGGCAATAGGCAAAAGAGTCAAAATTTCAGTCCCAATTTTAAATTAGGGTATGGGGTATTGGTGATATTTTCCCATGTCCCTAATAATCTAGATCACAGC # Questionable array : NO Score: 3.03 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTAACAACAACCCTCCTAGTACAGGGTGGGTTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.35%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-8.20,-10.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [71.7-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.78 Confidence: MEDIUM] # Array family : NA // Array 1 20074-13719 **** Predicted by CRISPRDetect 2.4 *** >NZ_VILC01000005.1 Aphanizomenon sp. UHCC 0183 scaffold5_cov0, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================================== ================== 20073 36 100.0 35 .................................... ATCAAAAAGGTGGGTTTGCTGGTATGACAAAGAAT 20002 36 100.0 36 .................................... ATTAAACATCAACCTTCTAAAGGTACTAGCACGGTA 19930 36 100.0 38 .................................... TTACCTTGGACACAGAAGAACTTACTCAACCTTGGCTT 19856 36 100.0 38 .................................... GGCTATCTGGTGATTAGGATACTTTATGCTGACAGCTT 19782 36 100.0 43 .................................... TTCTGTTATTCCGTCTAGCCTGTCTCTTGGTAAATCATATATC 19703 36 100.0 36 .................................... TAGCACTACAAAAGCCCCGCACCTCAGCCTTGACAC 19631 36 100.0 40 .................................... TTCAAGAACCCAATTGGGTTAGATTCAAATGATTTACGTG 19555 36 100.0 39 .................................... CTGTTGGTGTAAACGTCCCAAACGCGAGTTTTAACCAGA 19480 36 100.0 31 .................................... TTGCTAGGTTCTCTGCATCCTTAATGATTCT 19413 36 100.0 45 .................................... TGGCTATATCATTTCTGTGTAGCTTTATTCTCTTTAGTTCCTATA 19332 36 100.0 35 .................................... ACTAAAGATAGGGGTGTGAGAAAGTCTTGGAATCT 19261 36 100.0 39 .................................... CACAATAGTTGAGTTGAGCCTGTCAAGAATGTCTTGTTC 19186 36 100.0 35 .................................... CTTAGTTTGCGCTTTGCGAACTTTCTCACACCTAT 19115 36 100.0 36 .................................... AATATTAAGACTAATCCTATGGCGTTAGCCCCAAAG 19043 36 100.0 42 .................................... TGGCATAGCTCACGGTACAACACGCTTGGCGGGAAGTTATAG 18965 36 100.0 38 .................................... TATGGCGTTAGCCCCAAAGTTAAAAGCCCCGTTTCTGC 18891 36 100.0 42 .................................... ACGCGGTTAACTGAATGGGCGATCTCAGTTTCAACGGCAGTC 18813 36 100.0 44 .................................... AAGCGATCGCATCTAGCGGTTGTGTCTTATCAGCAATGATAGGA 18733 36 100.0 37 .................................... ATGAAGCCTTGGATTGGATGGTATGAAGCGATCGCGG 18660 36 100.0 42 .................................... TGCTAGAAGCATCGGCTAAAAGACTCAATTCAAATATTTCTT 18582 36 100.0 35 .................................... TTCAGAAGCTATTTCTGACACAACTTTTTTGATTT 18511 36 100.0 40 .................................... CTGCAAACATTCTTTCCATACTTGTGATTGTTAGGGTTGG 18435 36 100.0 43 .................................... AAAGTAGCTGACACTAAAGTACCCATTACTTTAAATACAACGC 18356 36 100.0 38 .................................... TGTTTCGTTTAATTCTTCGTCTCCGGCTAATGCCCACG 18282 36 100.0 40 .................................... CCAGCAAAAGGTTTATGAATCTGAAGCAGATGAACTTTTA 18206 36 100.0 39 .................................... TTCGCAATATCCTACAATTTCTGCTGTGGGTGTAGTTTC 18131 36 100.0 39 .................................... TCGCACACAATCTTTAACCCACTTGCCTCATAAGATTTC 18056 36 100.0 37 .................................... ATACACACTCAAACAATCTGTCAGCATCAGAGTCAAT 17983 36 100.0 37 .................................... TGACGGGCATAGAAATATTCGATATCATCCAAATAAC 17910 36 100.0 40 .................................... CTCCCACCCATTGCTCGGTGACGACTTCAACTTTTAAGAC 17834 36 100.0 35 .................................... CCTCATTAACAGTTGTTTCCTCATTAGATGTTACG 17763 36 100.0 41 .................................... GGTGTCATATTAATTTGTACAAAGTCGTTGAGTTTTCTGAG 17686 36 100.0 36 .................................... ATCCGCCGTTATCACCACCTGCTGCTGTTACGAATT 17614 36 100.0 36 .................................... ATAAGAAATACTGTCAGACAAACAATAGCTAAGACA 17542 36 100.0 36 .................................... GAATCAGGATCAACTGATGTGGTGATAACGCCTTTT 17470 36 100.0 40 .................................... CTTCAACTTTTAAGACTCGAAGTAAACCTGAATAGCTGAA 17394 36 100.0 35 .................................... GAACATAGATCAGCGATCGCGTTAATATCTAGATT 17323 36 100.0 34 .................................... TAATGTCTGCTGTCTTTGCTGTAATTTATCTGTA 17253 36 100.0 41 .................................... TCTAGAACCAGCTTGCGCCATCTTTTTTGCTGTATTTAGCT 17176 36 100.0 38 .................................... GCAATTTGAACATAATCGCAAGGGTGCGGGGTTATCAG 17102 36 100.0 43 .................................... CTACCAAATACATAATCAAAGATGTCACCCGTTTCATATCCTG 17023 36 100.0 46 .................................... CTTCGTAGGCTTTCTCCCATGCGACTACACGCGATTGATGCTGGGA 16941 36 100.0 37 .................................... GAAGTCTTTCACCTCCATGAGTTAGGGAGAGGGAAGA 16868 36 100.0 38 .................................... TTTACGCTTACCATAGTTTTTTCTTGACTTTATACAAT 16794 36 100.0 43 .................................... TTTTTAGGTAAGGGTTTAGCTTGAACCAGTTTACTGGTATCGC 16715 36 100.0 40 .................................... GTCATCTTGGAACGTGCCATACCAGAGATCATCAACTAAA 16639 36 100.0 42 .................................... AGTTCTCGTAGGCTTTACCCTGTGAGTTCTTAATTTGAATAG 16561 36 100.0 40 .................................... CCTAAACCTTCTTCTGCAAAGGCTCTGTGGAACGCAGTGA 16485 36 100.0 39 .................................... AGGTAAAGATTTTCTAAGCCAGAAATAACTGTAAATTTC 16410 36 100.0 34 .................................... GTCAGATGAGGAGATAGAAAATGCCTAATGTAGA 16340 36 100.0 40 .................................... TTACTAATACGAAGTTTCCTGATTCAGTTTGTACGGTTTT 16264 36 100.0 40 .................................... CCACCTCAAGACCTGTTTTCAGGTCACGCCGGTAGATATG 16188 36 100.0 35 .................................... AAGTGCCGTTACCTTTTGGTTTGTCGTAATTTGTT 16117 36 100.0 41 .................................... TGTCCCGGCATCCTTCATACCACAAGGTCTATATCTGATGA 16040 36 100.0 35 .................................... TAAAAATTCACCCCCAGTCATACCCTCCCATTCCG 15969 36 100.0 42 .................................... AGTTATTAAATATGGTCTAGTAGATGCAGACGGTAATAACTT 15891 36 100.0 37 .................................... CAGACCTTTAACTTCTTCAATTATCTGTACACCTGAT 15818 36 100.0 40 .................................... TTAAAGGTGGGAGCGTTGTATGTCATCTTCCAGATGACCG 15742 36 100.0 36 .................................... CTCCAACAGCACAATATATTTGAGAAGTGTTCTAGA 15670 36 100.0 38 .................................... TCTCTAGTTGAGTGGTGAAAATAGCGGGCATATCGAGG 15596 36 100.0 36 .................................... CTCTGTAGGCTAAGGTTAGCTGTAGCAACTCAGAGT 15524 36 100.0 40 .................................... CAGTTACCATAAGCTGGTATGGAGGATCTACATACATTGC 15448 36 100.0 34 .................................... CTTCTACTACATCCCAGTTCTCTGCCAGCCTCAT 15378 36 100.0 38 .................................... CAGAGATACCAACAATTAGCTTTATCTGTTCCAGTATT 15304 36 100.0 39 .................................... AAGACAAATTTGACGTTTTATATAAATTATGATTTACTA 15229 36 100.0 40 .................................... CTAGATGTGCTGCTAGTTGTGCCACAAACTCTTCATGATC 15153 36 100.0 37 .................................... ATCGCTAAATACTGCATCAATGTCTGTTACCTCTAAG 15080 36 100.0 36 .................................... GGTAGATTTGTTTCTCCCCAAAGAGTTGTAGAGACT 15008 36 100.0 32 .................................... GCTGGAAGGCTGGTCTTTACCAGAGAGGTGGT 14940 36 100.0 33 .................................... TCGTAGTGACAGCCACCGACTCGGTCATCTGGA 14871 36 100.0 35 .................................... GCCACTTCTAATCCAGTCTTTAAATCCCTGCGGTA 14800 36 100.0 45 .................................... AGTCAATGCCATCGTCATTGTCGGGTTCAGATGCAGCAGGATTAA 14719 36 100.0 36 .................................... GATATTCAGCACTATCATCTATTAGAAGTGGTTTAT 14647 36 100.0 35 .................................... TGAAGAATTTGAATGTTGACCAAAGACAGGTATTG 14576 36 100.0 36 .................................... AATACCTGTACCTGTGATTGCATCACCTGCTTTTAC 14504 36 100.0 40 .................................... ATTGCGGATGCTTCACCTACAGTGAGTGAACCACGTTTTT 14428 36 100.0 38 .................................... GATCGCTATATGGAAATTTGCCATGCAGTAGCCTACCA 14354 36 100.0 46 .................................... TTAAGTAATCAAAATCCAAGCCAGCTTCTATTGCTTCACCTATCCA 14272 36 100.0 39 .................................... TTTAATTGATGCAAAACGCCAAAAAGCAGCGATTATTAT 14197 36 100.0 36 .................................... TTGTGGTCTGTAGTGTAGGAGCAGATCCAAAATTTA 14125 36 100.0 40 .................................... CTGTCCAATATTTAATGTCAAATGTTTTTATAAAATAATT 14049 36 100.0 38 .................................... TTAATGGTATTTCTTGCCGTCCAGGATGAAAATGGGGA 13975 36 100.0 37 .................................... GTGAGGGCTGAACTTCAAAAACACAAAGTCCATATTA 13902 36 100.0 36 .................................... TTACTACTTTCATAACTAAAACCAAACACTAAAACT 13830 36 97.2 40 ............C....................... AACGCCACCACGACTAAAACCTTGCTGTTTTTGTAAATAT 13754 36 94.4 0 .........................C....A..... | ========== ====== ====== ====== ==================================== ============================================== ================== 86 36 99.9 38 ATTCCCACTCGCTGGGGATATTAATTGAATGGAAAC # Left flank : TGCCATAACGACAATTTTCAATGCTAACCTACTTATGTTTTTGTATGTGATTGCTTATGATATTCCCTGTAATAAACGGCGCAAAAAAGTAGCTGATTTATTGGAAGGTTATGGACAGCGTGTACAGTATTCTGTGTTTGAATGTCAATTGAGTACAGAAAAATATCAAGATTTACGTCGTCAGTTGAGGAAAAAGCTGAAGTTAGAAGAAGATAATGTCAGGTTTTATCCTTTGTCTCGACATACTCTATCTCAAGTGGAAACTTGGGGTGTGGGAATACCTGTGATTGAACCACCTAGTTCAATTATCATTTAGTTGTTGCCGATGTTTGGGAAAAATAGCTGAAGTGTTGATTTTATGGTTGTGAACTTCGGTTGCTTATTGGATAAGGGTTACGCGGTTTTTAATGGTAGTTTTGTAGGCTGGTTGGCGGTGATTTTTGCTGACCTTCGGAAAGTGGGTCTAGACTCTTTGCACAGCAAGGGGTTAAAATGAAGGG # Right flank : AGGGGAGGGAGGCGATCATCAGGAGTATATATAAATACATAATAAAATATTTACTGATATTTTGAGAATCAGTAAATTGTAACTATCAATGTTTGGTAAGGGAAACGCTGTAACTTGATAGCTGCATAAACAATAACCCATGTCAAAGACAAGAAAATATTTGTAATAAAACTCTCAAAGTGAGGAAAAGCTTACAGAGTAAGAGTTAGAGAAAACCTTACAAAAATCTTGAGATATTTTAGATTCCTAGACAAATACTGAATCGCGCTCTTATAATTCATCTATAAGCTACACAGGGGATCTACCGATGACGGCAGAATATTGGCGGGCTAAGATTTGGGGGTTACTACATGACCCTGTATTAAAGGCATTACATGACAACACAGGACGGGGTAAAAATAGCTTCTATAAACAACTAGAAGTAATGAAAGCTTGGGTTGAAATTGGCAAAACCCCCGATGATTCTCGTGGTAAAGCATTAGCAAATATACTATTAGCAG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTCCCACTCGCTGGGGATATTAATTGAATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-1.50,-1.50] Score: 0/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [68.3-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.41 Confidence: LOW] # Array family : NA // Array 1 16403-16237 **** Predicted by CRISPRDetect 2.4 *** >NZ_VILC01000097.1 Aphanizomenon sp. UHCC 0183 scaffold97_cov0, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================== ====================================================== ================== 16402 20 100.0 52 .................... GCCAAAGGGTGTCAAAACTACGTTGACGCTTGTGGGTTTCAACACCCCTCCT 16330 20 100.0 54 .................... GCAAGGGCTGGCTCAGGGAAACTAGCTCTTTCGACTAGTTTCAACACCCATCTC 16256 20 95.0 0 ......A............. | ========== ====== ====== ====== ==================== ====================================================== ================== 3 20 98.3 54 GGAGTGGGGCGGGTTGAAAG # Left flank : GACATCTGCCAAAATTGCTTTTGGAAGTGTCACTAGGTAGGGGTTTGGTCGGGAGGAGTTTGTTTCAACACCCCTCC # Right flank : ACCTTTATGCAGGCATATAAAACATTTTAGGTGGGTTGAAAGGCGCACTTCGTTCGGGATTTTCCGTAACTGAAGCAATACCAATAAATAAAAGCTATTATTGTAATAGCTTCCAATGCCAATACACGATGATGATTAGGTAATTTGGCAAGACGGACACCAATTTGGCAAGACGGACACCAATTTGTCAACGCGGTCAAATAATCTGGCAAGTGACAGTACAACAATCGGGATGACTGGATTCGAACCAGCGGCCCCTTCGTCCCGAACGAAGTGCGCTACCAAGCTGCGCCACATCCCGCCACAAAAGCGGAAAATACGGTTTTGGGGAGATCCCAAGTAGAGCAATTTTCCAAAAAAATGGCAATCTAACTCTACAGTACCACAATCAGTACAAAATAACAAACTTTTTCTCTTCTACAAAGGTCTTTGCTTGCTACCATAAGATTTGTATAACTAAAATGGTAAAAGTAGACTGTGACTGTAAAACCAGACTGGTT # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:-0.75, 7:-1.00, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGAGTGGGGCGGGTTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-50.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA //