Array 1 217694-218192 **** Predicted by CRISPRDetect 2.4 *** >NZ_BLRR01000002.1 Streptococcus canis strain FU149 ScFU149_contig02, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 217694 36 100.0 30 .................................... TCTATAAAGATTCTAAAACAGGTGCTATCT 217760 36 100.0 30 .................................... ATAGCCTTTTTTAGTTGCATTAACTATTTT 217826 36 100.0 30 .................................... TTTTTGGTTTTCGTTTAGTGTTACGTTAAT 217892 36 100.0 30 .................................... GTAATGAGATATGTGAGTGTCTAAAAATAT 217958 36 100.0 30 .................................... GATAGCAGTACCGCTGACAACATTGTTGGC 218024 36 100.0 30 .................................... TTTTGGTAGAGCAACTAACTCACCAAGACT 218090 36 100.0 31 .................................... TCACACTCAAAGTTTACGCTCATCAGATAGA 218157 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =============================== ================== 8 36 100.0 30 GTTTTAGAGCTATGTTGTTTTGAATGGTCCCAAAAC # Left flank : CACAGCCTGACGACGTCCACAGCGAGCCTTGTTCGCCTTATAGTAATGATAGCACTCAGTTGGCTGAATGCCCTTGTTTGAGGAAAGTCACTACCTTATGAATGGTTTGACGGCTTCGCTTAAGTGATTGCGCAATTTCGAGGACAGAAGTATCTTTCTCAACAGATGCCTCTATCATTACGAGCTCATTTGTGGTAAGATGGGCATGGGTCATTTATGTTACTTCCTTTCAGACAAATGTGGTGTTTATCTGAGCCTAACATAGATGGCTTTTTCTGTCTAATTTAATTTTACAAATTGGGCACATAAAAAATTGTAAGGCGACAGAACAAAGGAGAAAAGAAGGTTTCATGCGTTTGTCGTGCTGGGATAAGAAGGGAAGTTGATTCTATAGGTTTTTTGGCGTATAATGGAGCTATGAAAAGGACTGTTTAAGACTAAAGTCTAGCTAAGACAAATAGTGCGATTACGAAAAATTGTGGACGAAAATAGTCTACGAG # Right flank : CAGATAATACCGCTTGTTGTTGATCTTCGCTTCTTTCTATTAAAATGTTTTCATGTTATAATAGTCAAAAGGAGAAAGAGAGTGGAGCGATGGAACAAACATTTTTTATGATTAAGCCTGATGGGGTGAAACGAGGGTTAGTTGGGGAGATTTTGCGACGTATTGAGCGGCGAGGGTTTACATTTGAACGCTTGGAGTTGCGGCAAGCTAGCTCGGAACTCTTGGTTAAGCATTATGAGGCCTTGGTTGCGAAGCCATTTTATCCTGAGTTGGAAGCTTACATGACCAGTGGCCCTGTTTTAATTGGGGTACTTTCTGGGAATCGGGTGGTTTCGTCTTGGCGAACCATGATGGGGGTAACTAATCCCAAAGATGCTCTTCCTGGCACTATTCGAGGTGATTTTGCTCAGGCTCCTGGTGATGATGGTGGCATTTTTAACGTGGTTCATGGGTCTGATTCTCTAGATTCTGCTAAGCGTGAGATTGCCCTTTGGTTTAAC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTATGTTGTTTTGAATGGTCCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: F [matched GTTTTAGAGCTATGTTGTTTTGAATGGTCCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-2.00,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [63.3-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0 Confidence: HIGH] # Array family : II-A [Matched known repeat from this family], // Array 1 18559-16903 **** Predicted by CRISPRDetect 2.4 *** >NZ_BLRR01000003.1 Streptococcus canis strain FU149 ScFU149_contig03, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ================================================================= ================== 18558 32 100.0 33 ................................ ATATTTTGTACCTCAATACATTACTTATTATCC 18493 32 100.0 36 ................................ AGCTTGGGAAGTGGGCAGGAACAAACCTCTAATGGA 18425 32 100.0 36 ................................ ATGGATTGATCAACAGAATCCTTAGTAAACTCTCCA 18357 32 100.0 33 ................................ TGCTTTACAAACCGTCCTATTATCAAGTCTGTT 18292 32 100.0 36 ................................ GCCTCTGGTCTGTCCAGTCAGCGTCAAAATAACAAG 18224 32 100.0 34 ................................ ATTTGTATAGTATTGAAAGACATTCCCTTCTTTG 18158 32 100.0 34 ................................ TTTTAACATTGTTCCTACTTCTCGGACAAGCAAC 18092 32 100.0 33 ................................ CAAAGCAAACTCAAGATTTTTAAAAACAAAATC 18027 32 100.0 34 ................................ TTCCTCTATGGTGGCCAATTTTGCTGAAGCAATT 17961 32 100.0 34 ................................ CGTGAAAATAATTTTGAATTGCTTATACCAAAAG 17895 32 100.0 33 ................................ TTTCCATGCCTTGGCAAAATCCCCAGACGACAT 17830 32 100.0 34 ................................ GACTGTGTAGCCGAAAATTACCGCGTCCACTAAT 17764 32 100.0 34 ................................ GGCACCCATTTCAAGCGAGAAGACGGCCACAGCT 17698 32 100.0 35 ................................ ATTTTTTGCATAACACGAGAAAATGCAGAGCCCCC 17631 32 59.4 65 ...................NNNNNNNNNNNNN NNNNNNNNNNNGGGTGAGTGGATTGAAATTGCTTTGATGGTTTTTCATGGGCTCTCTAACAGCAC 17534 32 100.0 34 ................................ TGTCCATAAATGTCAATGTCAAATGCGCCGCCGT 17468 32 100.0 35 ................................ TATCACTAAAGATATCAATAAGTCGACCAATCTCA 17401 32 100.0 34 ................................ CTTTAATAAAGATAAAGCTGAAATCGATAGATTT 17335 32 100.0 34 ................................ TTGCTATTTTGATAGTACTATAATAACATGTAAA 17269 32 100.0 34 ................................ TCTTACAACTACTACGACCACGCAGCTTCCGCTG 17203 32 96.9 35 ......T......................... TTTTTGTTTTGATTACATTCTCGGTATGTCTATCC 17136 32 96.9 35 ......T......................... ACCCTTTAAGTCTTTTATGGTAACAGTTACCTTAC 17069 32 100.0 36 ................................ TGCGTATTTTACCGTGCTTTTTTGCCTTCTGTCGGG 17001 32 100.0 35 ................................ ATCAGTTGTTGTGCTACCTTTTGGTGCAGAAGCCT 16934 32 75.0 0 ......T..G...........AC...A..CTC | ========== ====== ====== ====== ================================ ================================================================= ================== 25 32 97.1 36 GTCTCACCCTTCATGGGTGAGTGGATTGAAAT # Left flank : AAGGCCATACGAGGAGATTTAGAAAGCTATCCACCTTTTATGGTTTAGGAGATGTTATATGATGGTTTTAGTTACTTATGATGTAAATACTGAGACATCGGCTGGTAGGAAAAGATTACGTCATGTTGCCAAACTCTGTGTGGACTATGGGCAACGTGTTCAAAATTCTGTTTTTGAATGTTCTGTGACACCCGCAGAATTTGTGGATATAAAACACCGCTTAACACAGATTATTGATGGGGAAACTGATAGTATTCGCTTTTATTTATTGGGTAAGAATTGGCAGAGGCGTGTGGAAACACTTGGTCGCTCAGACAGCTATGACCCAGATAAAGGTGTCTTATTATTGTAAAAACGTTTAGTGCGACTCGAGGTTTCACAGAAAAACCTAGCTTGCTCGCGCAAAAATAACTTAAAAAAGAATCGAAATGGAGATAAAAAGGTTTAAAATGCCTCTGTATTCTCCAGCCGTTTCTCTATAAACTGTGTCATTTGGCGCA # Right flank : CTATGTTTTTGGCAGTTCTGTTTTGTGATTTTCTCTGTTCACAAGTTTCCAACTGTTTTGTCTCTACTTTTTCTGTCCTATATGCTATAATATGCCTAAATAACTATGGTAAAGGAGTTAGGATGACTAAGGTTCGGTATGGGATTGTGTCGACAGCGCAGGTGGCCCCTCGTTTTATTGAGGGTGTACGCTTTTCGGGCAATGGCGAGGTTGTGGCGGTGTCTAGTCGGTCACTTGATAAGGCAAAGGCTTTTGCGGCAGCGCATCAGTTACCTAAGGCTTATGGTAGTCTTGATGACATGTTGCTGGATACGTCGATTGATGCTATTTATGTGGCAAGTATCAATCAGGATCATTTTCCTACAGCTAGGAAGGCTTTGCTGGCAGACAAGCATGTTCTCGTGGAAAAACCGTTTACCTTGACAACCGCTCAGGCTGAAGAGCTCTTTGCCTTAGCGCAGGAGCGTGGCTTATTTTTGATGGAAGCTCAGAAGGCTGTC # Questionable array : NO Score: 9.04 # Score Detail : 1:0, 2:3, 3:3, 4:0.85, 5:0, 6:0.25, 7:-0.06, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCACCCTTCATGGGTGAGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-4.70,-5.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : NA //