Array 1 91923-97320 **** Predicted by CRISPRDetect 2.4 *** >NZ_HF952039.1 Thermobrachium celere DSM 8682, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== =========================================== ================== 91923 34 80.0 29 A......A......T.........-T....A.T.. ACAGTTTTAGCTTACCTTTAAGGAATTGA A [91927] Deletion [91986] 91987 35 85.7 34 C...........C.T.......G..........T. ATACCTTAGCATTAATGAATGATGGAACTGTTAA G,A [92016,92018] 92058 35 97.1 35 C.................................. TTCAAGTGTTGTAAAGCAACTTTTAGATATACTAC 92128 35 97.1 40 C.................................. GCCTAGGCGAAATGTTCGCCCTCAGCCTAACCTCAAACCT 92203 35 97.1 34 C.................................. AGATAAAGGTTTCAACTCCCTTTGCCTTCTCTGG 92272 35 100.0 36 ................................... TAAAGGTTCAACAAGGAAAATTGACATTAAAAATAG 92343 35 100.0 38 ................................... TAGGTGAATTACAAAGGTTTCATCAACCATTATAGATT 92416 35 100.0 42 ................................... GAAAAGAATATTCTTTTTGCATATCTAAACCCTAAAAAAATT 92493 35 100.0 39 ................................... TTTTTTATTAAATTTCATTTTATCCCCTCCCCTCTATTA 92567 35 100.0 36 ................................... ATATATGCAATTTGTTTGTTATAAGCCATATCTTTA 92638 35 100.0 38 ................................... AGGTCGACAGCAAAAATGATGTGTAATACATATAGCAA 92711 35 100.0 35 ................................... TTATTGCTGTCGCATAAATCCTTAAATAATTGCGA 92781 35 100.0 36 ................................... CCATATTGACTTTGTGTCGCCTTCCATAAGATTTTT 92852 35 100.0 36 ................................... CTCTCCAGTCCAATCTCCTGTTTGTTTGCTTTATGA 92923 35 100.0 38 ................................... ATCCTGGCTACTACAATGCATCCGTTGAATTCATAGAT 92996 35 100.0 37 ................................... TAAAATATGATACCTCTAATACAATGAAAGCAGATAT 93068 35 100.0 41 ................................... CCTGCCCCTTAATTTTCTTCTTGACATTTTAAATAATTGGT 93144 35 100.0 36 ................................... TCAATTACATGATAAAGACTCTATAACAGGTTTATT 93215 35 100.0 39 ................................... CTTTATAAAGCCCCAACGCATGTGTTTTTGTGAATTTTG 93289 35 100.0 36 ................................... GGATAAGGCTAATTTCCAAACTGCAAAGATTCAAGG 93360 35 100.0 38 ................................... GGATAGAGAGCTTGCCGGAGAAGTTAAAAAAGCAATGG 93433 35 100.0 37 ................................... CTGCTTCTTCTATTGCTTTGATTATTACTTCATATTC 93505 35 100.0 40 ................................... ACCACCCTGTTGCAGTAAATCCTGATTCGTCTTCATCTCC 93580 35 100.0 37 ................................... ATTTTAGCTTTTAGCGTCTTAATTTCTTCTGTTTTTG 93652 35 100.0 40 ................................... TAAAATTTATCAAGAAAACGAAGGAATAAGAAAAGCAAAG 93727 35 100.0 38 ................................... TAGATATAGCATTTGAGCTTCCTGCTGTTGTATTATCA 93800 35 100.0 38 ................................... GGTGAATGGGAGTTGGGAACTCCCTTCACCCTCATTAT 93873 35 100.0 39 ................................... ATCGGATAATCTTGTTGCCCCCTCCACCCTGAGTCGGGT 93947 35 100.0 34 ................................... TTTGCAGTCATTCATGTTGCACCTCCGGTTATAA 94016 35 100.0 39 ................................... AAATAGCAGATACATTCAAATTTCAAGAACAGGAACATA 94090 35 100.0 38 ................................... AATCTAACAAATATACCATTCCGATTTTCAAGTAATTC 94163 35 100.0 37 ................................... CTTTAACATACCTGTTCCCCCTTTTGTTTTTCTATGT 94235 35 100.0 38 ................................... GCATACCAATTAACGTCTAATGTCGGCACCCTCGGAGG 94308 35 100.0 37 ................................... GTAGTCTTTGTTTTTGCCATTTTTCAAGTTCTTTGTT 94380 35 100.0 35 ................................... ATAATAACATAAAGGAGTGATATTATGTTACCAAT 94450 35 100.0 35 ................................... TTTTTTCGGAGTAAAGAAGGTAATTACATCTATGG 94520 35 100.0 38 ................................... GAATAACCATAATCTACTTGTCCACCTGGAGTATACAT 94593 35 100.0 40 ................................... TTAAACCTAACACTAAATATTGTTATAGTTTTTATGCAAA 94668 35 100.0 39 ................................... CATTTTCTTTCCTTCTTTGAGCAATCTTGTTCAAGTCCC 94742 35 100.0 39 ................................... CTCTTTAGTAACGGCTAAAGCCTCCTGCATTTTCTTTCT 94816 35 100.0 42 ................................... ATATGTCAACGGGATTCCTGTAAAGTATCCGTTACGAATATC 94893 35 100.0 35 ................................... AGTATATGGGGATGCAAAAGAATGATTTATTTTAT 94963 35 100.0 35 ................................... TTATTATACATTTTGTTTCAAGTCCAAACAATTTA 95033 35 100.0 38 ................................... AGCACCATATAATGGAGAATTCACATACAAAATAACTC 95106 35 100.0 37 ................................... ATCTTTTCCTTTATTTCATCCCATTTTTTATTGACTT 95178 35 100.0 36 ................................... ATATACCTTGTGGACGAGCAGAAATATATTGAGTTT 95249 35 100.0 37 ................................... AAGATAAAGAATGGACTTTATATTTCAAAGTTGAGGA 95321 35 100.0 36 ................................... GAAATAAAACAGAGGGATTTATTCCACATACCTAAT 95392 35 100.0 38 ................................... ATAGGTTGGCAAGAAAGGTTAAAATCCGCTTTGGAAGA 95465 35 100.0 38 ................................... ATCCAAAGGCAACCTAACATCCCATGCACATGATGTTG 95538 35 100.0 39 ................................... AAAAGGGGTAGTTGCGTAATTGTTAAAACAAGAATTTAT 95612 35 100.0 36 ................................... GTTTTGCTTCCTCTAAGCTCACTATCATCAAATCAC 95683 35 100.0 37 ................................... CAGCAGTATAGTCAGTTGATTCGTCGTCAAGAACATA 95755 35 100.0 35 ................................... TGATATAAAGGTGCTTGATGAATATACAAAGAAAA 95825 35 100.0 37 ................................... CTCTTGTGTTGCAAGCTCCTAAACCTTCTGTGATAAG 95897 35 100.0 41 ................................... ACCTGCTTCGTTTACGATATAAGCCTGTTGTTTTCTCCCTA 95973 35 100.0 41 ................................... CTATATCACGAGATGACCACGAACTAAAACCAATTAACTAT 96049 35 100.0 36 ................................... CATGTTGTCATTCATGAGCTTTATAAACCTTGAAGT 96120 35 100.0 39 ................................... AAATTTGTGGGGGCTAAGGGAATACCTCCTAATTTAGAC 96194 35 100.0 39 ................................... GATAATAGCATGAGAATTAAATTTAGAGACAAGCTCTAT 96268 35 100.0 39 ................................... CTATGTGTAATTTTTACACATACCTATGTGTAATTTTTA 96342 35 100.0 37 ................................... TCATAGTACACCTCACCCTTTAGAATTTATAATTTAT 96414 35 100.0 34 ................................... AGAATATTGCTGCTAATACTCACAAACCTTATAA 96483 35 100.0 36 ................................... CGCTGGTATAAAAGCCGATGTATCGTCTGTTATACA 96554 35 100.0 34 ................................... ATAGACACTGACAAGCCTGGTATAACTTTATTTT 96623 35 100.0 36 ................................... ATTATATTCATTTCATCAAAACCTTCACTTATTTTA 96694 35 100.0 36 ................................... AGGTAATGTAATTTTTAAATCAAAAGTGGAAATTGG 96765 35 100.0 34 ................................... AAAGAAATTGCGGATAAAGAAGGTTTAGAATTTA 96834 35 100.0 39 ................................... AGCATAAATTTCATTTAATTCACCACTTCGAACACTCAT 96908 35 100.0 40 ................................... TCATTCCAACTCAATCATGGCAAAGATTAGTTGTTACTGG 96983 35 100.0 39 ................................... TTTTGAATGTCAGAATACCTTTCCCCATCAATTGCCCTG 97057 35 100.0 43 ................................... ATGGATTCCATAGACATAGGGTAGGAAAAGAATATCAAGATAT 97135 35 100.0 40 ................................... GAGAGTATGCATCACAATAAGTCGCAAGCATATCAATATC 97210 35 100.0 41 ................................... TCCAATTCTTGCCCTCTTCCCAGCATATCCATTCTGGTTCA 97286 35 100.0 0 ................................... | ========== ====== ====== ====== =================================== =========================================== ================== 75 35 99.4 37 GTTTTAATCCCTTTCTAGGGAAATAGAATTCTAAC # Left flank : TGCCATTTAAAAACTGTTCAAGTATCAAATGCTTATTTTGTCGTGTCAATAAAACTACTTCATAGTTTTGTTTTACAAAGTCTATAAAACACTTTATTATCTTATATTCTTCTCTATTTATAACTTCTATGTATGCCTTGGCTAATTCACCCTTTAACTCCCTATCTCTCAAAAGTAAATCCCTAAGTGTCCTTATAAGCTCAAATCCCAAAGCAAGTTCTTGTAGAGAGTAATCCTTAAAACCTCCCCCCACTTCCTCAAAAGGATTAAACATAATATTTTCTAAAATACCAACAGCCCGATTAAAATCCCCCATAAATATCCTCCCTGTTTAATAAAAAAATACTATTTTTAGAAATAGTATGTTTACAAAAACAAAATTATTACTAAAAAAGAGTGCTATAAAAATTACTCTATAGCACCTATTTTAAAAACAATTAAAAAGCAAATTACACACATATTAAAACTCAATTAAAAATATATTAAACAAAAATAATATC # Right flank : CTCTGTCTTCAAGACGTCTTGAAATTAAAGGATTCTTTATATATTTTACGAATACATTGAAAATTAAAGTAATATTTCTACAAAATTATCTCAAAAATTCTTTTATAAAATCTGAAAATACTCATGCGAATAATATTTCTAAGGTTTAACATCATAGAACAATTATAAATACTTAATTCATATAAATTTAATTTTGATTTATTTTTCAGTTGAAAATCTTTTCGCAACCTATGTTATACGTAAAAAATATCTTCATCAAAATGTTTCTTTAAACCAATATATTCAACAAATCTTTGTGCCTCTGGAGTTAATCTGTAAATTATTATACTATCTTCATTATTATTTATCAATTTCATTAACTTCACTTTCAACATCTGTAGTTGGGTATTATTTAATCTGCACTCAAATAAAGAATACTGTACTCTTTGACCAAACCCCTCTAAAACCTTTGAGACCCTATTCCTTGTTCTATCTTTTGGAATATCGTAACTTATCACATA # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAATCCCTTTCTAGGGAAATAGAATTCTAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-6.70,-6.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [15-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [85.0-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0.41 Confidence: LOW] # Array family : NA // Array 1 1784767-1784203 **** Predicted by CRISPRDetect 2.4 *** >NZ_HF952018.1 Thermobrachium celere DSM 8682, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 1784766 30 100.0 36 .............................. CTACTATCACTTTCTCTAAATTTTCTCTTGTAAACT 1784700 30 100.0 37 .............................. TTTCTTCAGACAGTTGCTCAATGCCAATTTCAAAAAA 1784633 30 100.0 36 .............................. CTTCTTCTTTTGTATATGATAATGCAAAATAATAAT 1784567 30 100.0 36 .............................. CTAGCATTTCAATTTCGTTCATATATTCTTCTATCA 1784501 30 100.0 38 .............................. TAAATTATTAAGTTTATCTATATTTTCTTGTGTAGGTT 1784433 30 100.0 38 .............................. TTAGGCTTTAAAACTCTATACATTTCCTTTAAGCAAGC 1784365 30 100.0 37 .............................. ATATGCTTTGGTAATTTTTATATATATTTTCTAATTG 1784298 30 100.0 36 .............................. CTAATTCAAATGTGTAAGGAAGTTTTTCTTTAGCTA 1784232 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ====================================== ================== 9 30 100.0 37 GTTTTAATCGGACCATATTGGAATTGAAAC # Left flank : AGATGAAAGGTTTATAGAAAATATAAAAAAAATATACTTGCAAAGTATGAAATAATGTATAACAAATTGCCAGATGATACAAGATTTGATATTACCTTTGAAAGGAATATACCAAAACTAATCCATTATAAAGATGGAATAAAGATAAAGGGATATTTAGTTGATTGTGAGATTACAGGAAATCCTGAACTTATAGAGGTAGCCTATGAATGTGGATTGGGTGATAGAAATAGTTTAGGTTTTGGTATGATTGCTTGTAAATAGAGTTAAAAATATAAGCTTTTTTTATCAAATATATAACTTCTTAAATTAAGTAATGAAGAAAATTAAGGAGTTTTAAATTAAGTTTAATATTGAAATTATGGAAAAAATAAGTTATATTAGTATATAGAGGAATAAAGTTTGTGAACCTCCTATGGATTTTAATCGACTGGAGGTTCCCGAAAAAAATAAGGGTTTTACATTATCACAACCCAGATAAAATGCGACTTCCCTAACGG # Right flank : TGGGCAGGAGAGTCGTTAATGGTAAGGGGGAAGCGAGGTATTTTAATCTAACAATATTGAATTTTAGATGTTACATTTAATTTGAAAGGTTTATATGTAGTGAATCAAAAACTGAACAATTTAAGATGAACTAAAATAAAAACCCCCTATTAGTGTTTAAAAAAATGCAAATAGGGGTTTATGTTGTTTTGCTTATTGTTAACATGTATTCTAGGGATAGACCCATATATAGGATGGAGATTAGGTATTATTATAGATGGTGTAATTGAATTATATTTTGTAAGTTGCTTCATGAAAATTGTATAAATGAATCATTAGAAATTTAAAATGTATTTAATGCTTTTAAATTAGTTTTATAGGATGGGGTATTTTATGTGTTCTAACAATTAGTATATGCTTCTTATATAAAGACTGCAGAAGCTTAATTCTACGAAAATCTAAAGTAGGCATATGAAGGGGTTAATGTGGTTGAATAATTAATTGAAAAGTGGCTTAAATAG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAATCGGACCATATTGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.20,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [58.3-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.5 Confidence: HIGH] # Array family : NA //